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Brevibacillus brevis NBRC 100599

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Functional category (NITE annotation)

Cell envelope and cellular processes (1063)

Cell wall (106)

Transport/binding proteins and lipoproteins (513)

Sensors (signal transduction) (91)

Membrane bioenergetics (electron transport chain and ATP synthase) (84)

Mobility and chemotaxis (74)

Protein secretion (22)

Cell division (20)

Sporulation (90)

Germination (54)

Transformation/competence (9)

Intermediary metabolism (726)

Metabolism of carbohydrates and related molecules (186)

Specific pathways (137)

Main glycolytic pathways (28)

TCA cycle (16)

Metabolism of amino acids and related molecules (222)

Metabolism of nucleotides and nucleic acids (81)

Metabolism of lipids (92)

Metabolism of coenzymes and prosthetic groups (137)

Metabolism of phosphate (4)

Metabolism of sulfur (4)

Information pathways (778)

DNA replication (24)

DNA restriction/modification and repair (62)

DNA recombination (8)

DNA packaging and segregation (17)

RNA synthesis (434)

Initiation (56)

Regulation (365)

Elongation (10)

Termination (3)

RNA modification (50)

Protein synthesis (105)

Ribosomal proteins (57)

Aminoacyl-tRNA synthetases (28)

Initiation (8)

Elongation (6)

Termination (6)

Protein modification (64)

Protein folding (14)

Other functions (353)

Adaptation to atypical conditions (38)

Detoxification (42)

Antibiotic production (30)

Phage-related functions (82)

Transposon and IS (29)

Miscellaneous (132)

Similar to unknown proteins (2088)

Homologous to unknown proteins (1451)

Partially similar to unknown proteins (637)

No similarity (941)

EC number

EC 1 (184)

1.1.1.- With NAD(+) or NADP(+) as acceptor. (5)

1.1.1.1 Alcohol dehydrogenase (3)

1.1.1.100 3-oxoacyl-[acyl-carrier-protein] reductase (2)

1.1.1.103 L-threonine 3-dehydrogenase (1)

1.1.1.157 3-hydroxybutyryl-CoA dehydrogenase (4)

1.1.1.158 UDP-N-acetylmuramate dehydrogenase (2)

1.1.1.169 2-dehydropantoate 2-reductase (2)

1.1.1.17 Mannitol-1-phosphate 5-dehydrogenase (1)

1.1.1.193 5-amino-6-(5-phosphoribosylamino)uracil reductase (1)

1.1.1.205 IMP dehydrogenase (2)

1.1.1.215 Gluconate 2-dehydrogenase (1)

1.1.1.22 UDP-glucose 6-dehydrogenase (1)

1.1.1.23 Histidinol dehydrogenase (1)

1.1.1.25 Shikimate dehydrogenase (1)

1.1.1.267 1-deoxy-D-xylulose-5-phosphate reductoisomerase (1)

1.1.1.271 GDP-L-fucose synthase (1)

1.1.1.272 (R)-2-hydroxyacid dehydrogenase (1)

1.1.1.3 Homoserine dehydrogenase (4)

1.1.1.30 3-hydroxybutyrate dehydrogenase (1)

1.1.1.35 3-hydroxyacyl-CoA dehydrogenase (2)

1.1.1.37 Malate dehydrogenase (2)

1.1.1.38 Malate dehydrogenase (oxaloacetate-decarboxylating) (1)

1.1.1.42 Isocitrate dehydrogenase (NADP(+)) (1)

1.1.1.44 Phosphogluconate dehydrogenase (decarboxylating) (1)

1.1.1.47 Glucose 1-dehydrogenase (1)

1.1.1.49 Glucose-6-phosphate dehydrogenase (1)

1.1.1.82 Malate dehydrogenase (NADP(+)) (1)

1.1.1.85 3-isopropylmalate dehydrogenase (1)

1.1.1.86 Ketol-acid reductoisomerase (1)

1.1.1.94 Glycerol-3-phosphate dehydrogenase (NAD(P)(+)) (1)

1.1.1.95 Phosphoglycerate dehydrogenase (1)

1.1.99.16 Malate dehydrogenase (acceptor) (1)

1.1.99.3 Gluconate 2-dehydrogenase (acceptor) (2)

1.1.99.5 Glycerol-3-phosphate dehydrogenase (1)

1.10.2.- With a cytochrome as acceptor. (3)

1.10.3.- With oxygen as acceptor. (6)

1.11.1.- Peroxidases. (2)

1.11.1.6 Catalase (2)

1.11.1.9 Glutathione peroxidase (1)

1.13.11.27 4-hydroxyphenylpyruvate dioxygenase (1)

1.13.11.5 Homogentisate 1,2-dioxygenase (1)

1.13.11.6 3-hydroxyanthranilate 3,4-dioxygenase (1)

1.14.13.3 4-hydroxyphenylacetate 3-monooxygenase (1)

1.14.99.- Miscellaneous (requires further characterization). (1)

1.15.1.1 Superoxide dismutase (3)

1.17.1.2 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (1)

1.17.4.1 Ribonucleoside-diphosphate reductase (2)

1.17.4.3 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (1)

1.18.1.2 Ferredoxin--NADP(+) reductase (1)

1.2.1.- With NAD(+) or NADP(+) as acceptor. (4)

1.2.1.10 Acetaldehyde dehydrogenase (acetylating) (1)

1.2.1.11 Aspartate-semialdehyde dehydrogenase (1)

1.2.1.12 Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (2)

1.2.1.16 Succinate-semialdehyde dehydrogenase (NAD(P)(+)) (1)

1.2.1.27 Methylmalonate-semialdehyde dehydrogenase (acylating) (1)

1.2.1.3 Aldehyde dehydrogenase (NAD(+)) (4)

1.2.1.38 N-acetyl-gamma-glutamyl-phosphate reductase (1)

1.2.1.41 Glutamate-5-semialdehyde dehydrogenase (1)

1.2.4.- With a disulfide as acceptor. (3)

1.2.4.1 Pyruvate dehydrogenase (acetyl-transferring) (2)

1.2.4.4 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) (2)

1.20.4.1 Arsenate reductase (glutaredoxin) (1)

1.3.1.12 Prephenate dehydrogenase (1)

1.3.1.26 Dihydrodipicolinate reductase (1)

1.3.1.34 2,4-dienoyl-CoA reductase (NADPH) (1)

1.3.1.54 Precorrin-6A reductase (1)

1.3.1.9 Enoyl-[acyl-carrier-protein] reductase (NADH) (2)

1.3.3.1 Dihydroorotate oxidase (1)

1.3.3.4 Protoporphyrinogen oxidase (1)

1.3.99.- With other acceptors. (2)

1.3.99.1 Succinate dehydrogenase (3)

1.3.99.2 Butyryl-CoA dehydrogenase (2)

1.4.1.13 Glutamate synthase (NADPH) (2)

1.4.1.2 Glutamate dehydrogenase (2)

1.4.1.9 Leucine dehydrogenase (1)

1.4.3.16 L-aspartate oxidase (1)

1.4.3.19 Glycine oxidase (1)

1.4.3.2 L-amino-acid oxidase (1)

1.4.4.2 Glycine dehydrogenase (decarboxylating) (4)

1.5.1.12 1-pyrroline-5-carboxylate dehydrogenase (1)

1.5.1.2 Pyrroline-5-carboxylate reductase (2)

1.5.1.20 Methylenetetrahydrofolate reductase (NAD(P)H) (1)

1.5.1.3 Dihydrofolate reductase (1)

1.5.1.30 Flavin reductase (1)

1.5.1.34 6,7-dihydropteridine reductase (1)

1.5.1.5 Methylenetetrahydrofolate dehydrogenase (NADP(+)) (1)

1.5.99.8 Proline dehydrogenase (2)

1.6.4.- (1)

1.6.5.5 NADPH:quinone reductase (1)

1.6.99.1 NADPH dehydrogenase (2)

1.6.99.3 NADH dehydrogenase (4)

1.6.99.5 NADH dehydrogenase (quinone) (11)

1.7.1.13 PreQ(1) synthase (1)

1.7.99.4 Nitrate reductase (1)

1.8.1.- With NAD(+) or NADP(+) as acceptor. (1)

1.8.1.2 Sulfite reductase (NADPH) (2)

1.8.1.4 Dihydrolipoyl dehydrogenase (4)

1.8.1.9 Thioredoxin-disulfide reductase (2)

1.8.4.11 Peptide-methionine (S)-S-oxide reductase (1)

1.8.4.12 Peptide-methionine (R)-S-oxide reductase (1)

1.8.4.8 Phosphoadenylyl-sulfate reductase (thioredoxin) (2)

1.9.3.- With oxygen as acceptor. (3)

1.9.3.1 Cytochrome-c oxidase (6)

EC 2 (370)

2.1.1.- Methyltransferases. (11)

2.1.1.10 Homocysteine S-methyltransferase (1)

2.1.1.107 Uroporphyrinogen-III C-methyltransferase (2)

2.1.1.13 Methionine synthase (1)

2.1.1.14 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (1)

2.1.1.31 tRNA (guanine-N(1)-)-methyltransferase (1)

2.1.1.33 tRNA (guanine-N(7)-)-methyltransferase (1)

2.1.1.35 tRNA (uracil-5-)-methyltransferase (1)

2.1.1.45 Thymidylate synthase (1)

2.1.1.63 Methylated-DNA--[protein]-cysteine S-methyltransferase (3)

2.1.1.72 Site-specific DNA-methyltransferase (adenine-specific) (1)

2.1.1.80 Protein-glutamate O-methyltransferase (1)

2.1.2.1 Glycine hydroxymethyltransferase (2)

2.1.2.10 Aminomethyltransferase (1)

2.1.2.11 3-methyl-2-oxobutanoate hydroxymethyltransferase (1)

2.1.2.2 Phosphoribosylglycinamide formyltransferase (1)

2.1.2.3 Phosphoribosylaminoimidazolecarboxamide formyltransferase (1)

2.1.2.9 Methionyl-tRNA formyltransferase (1)

2.1.3.2 Aspartate carbamoyltransferase (1)

2.1.3.3 Ornithine carbamoyltransferase (1)

2.2.1.1 Transketolase (1)

2.2.1.2 Transaldolase (1)

2.2.1.6 Acetolactate synthase (2)

2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase (1)

2.3.1.- Transferring groups other than amino-acyl groups. (5)

2.3.1.118 N-hydroxyarylamine O-acetyltransferase (1)

2.3.1.12 Dihydrolipoyllysine-residue acetyltransferase (2)

2.3.1.13 Glycine N-acyltransferase (1)

2.3.1.157 Glucosamine-1-phosphate N-acetyltransferase (1)

2.3.1.16 Acetyl-CoA C-acyltransferase (1)

2.3.1.168 Dihydrolipoyllysine-residue (2-methylpropanoyl)transferase (1)

2.3.1.174 3-oxoadipyl-CoA thiolase (1)

2.3.1.180 Beta-ketoacyl-acyl-carrier-protein synthase III (1)

2.3.1.28 Chloramphenicol O-acetyltransferase (1)

2.3.1.29 Glycine C-acetyltransferase (1)

2.3.1.30 Serine O-acetyltransferase (1)

2.3.1.31 Homoserine O-acetyltransferase (2)

2.3.1.39 [Acyl-carrier-protein] S-malonyltransferase (1)

2.3.1.40 Acyl-[acyl-carrier-protein]--phospholipid O-acyltransferase (1)

2.3.1.41 Beta-ketoacyl-acyl-carrier-protein synthase I (3)

2.3.1.47 8-amino-7-oxononanoate synthase (1)

2.3.1.51 1-acylglycerol-3-phosphate O-acyltransferase (1)

2.3.1.57 Diamine N-acetyltransferase (1)

2.3.1.74 Naringenin-chalcone synthase (1)

2.3.1.89 Tetrahydrodipicolinate N-acetyltransferase (1)

2.3.1.9 Acetyl-CoA C-acetyltransferase (5)

2.3.2.2 Gamma-glutamyltransferase (3)

2.3.3.1 Citrate (Si)-synthase (2)

2.3.3.13 2-isopropylmalate synthase (2)

2.3.3.9 Malate synthase (1)

2.4.1.- Hexosyltransferases. (2)

2.4.1.187 N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase (1)

2.4.1.227 Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase (2)

2.4.2.- Pentosyltransferases. (2)

2.4.2.1 Purine-nucleoside phosphorylase (2)

2.4.2.10 Orotate phosphoribosyltransferase (1)

2.4.2.11 Nicotinate phosphoribosyltransferase (1)

2.4.2.14 Amidophosphoribosyltransferase (1)

2.4.2.17 ATP phosphoribosyltransferase (1)

2.4.2.18 Anthranilate phosphoribosyltransferase (1)

2.4.2.19 Nicotinate-nucleotide diphosphorylase (carboxylating) (1)

2.4.2.2 Pyrimidine-nucleoside phosphorylase (1)

2.4.2.21 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (1)

2.4.2.29 tRNA-guanine transglycosylase (1)

2.4.2.3 Uridine phosphorylase (1)

2.4.2.7 Adenine phosphoribosyltransferase (1)

2.4.2.8 Hypoxanthine phosphoribosyltransferase (1)

2.4.2.9 Uracil phosphoribosyltransferase (2)

2.4.99.- Transferring other glycosyl groups. (1)

2.5.1.- Transferring alkyl or aryl groups, other than methyl groups. (3)

2.5.1.10 Geranyltranstransferase (1)

2.5.1.15 Dihydropteroate synthase (1)

2.5.1.16 Spermidine synthase (1)

2.5.1.19 3-phosphoshikimate 1-carboxyvinyltransferase (1)

2.5.1.3 Thiamine-phosphate diphosphorylase (1)

2.5.1.30 Trans-hexaprenyltranstransferase (2)

2.5.1.31 Di-trans,poly-cis-decaprenylcistransferase (1)

2.5.1.47 Cysteine synthase (3)

2.5.1.48 Cystathionine gamma-synthase (1)

2.5.1.49 O-acetylhomoserine aminocarboxypropyltransferase (2)

2.5.1.54 3-deoxy-7-phosphoheptulonate synthase (1)

2.5.1.56 N-acetylneuraminate synthase (1)

2.5.1.6 Methionine adenosyltransferase (1)

2.5.1.61 Hydroxymethylbilane synthase (1)

2.5.1.7 UDP-N-acetylglucosamine 1-carboxyvinyltransferase (3)

2.5.1.8 tRNA isopentenyltransferase (1)

2.5.1.9 Riboflavin synthase (2)

2.6.1.- Transaminases (aminotransferases). (5)

2.6.1.1 Aspartate transaminase (1)

2.6.1.11 Acetylornithine transaminase (1)

2.6.1.13 Ornithine aminotransferase (1)

2.6.1.16 Glutamine--fructose-6-phosphate transaminase (isomerizing) (2)

2.6.1.19 4-aminobutyrate transaminase (1)

2.6.1.21 D-amino-acid transaminase (1)

2.6.1.22 (S)-3-amino-2-methylpropionate transaminase (1)

2.6.1.37 2-aminoethylphosphonate--pyruvate transaminase (1)

2.6.1.42 Branched-chain-amino-acid transaminase (1)

2.6.1.62 Adenosylmethionine--8-amino-7-oxononanoate transaminase (1)

2.6.1.85 Aminodeoxychorismate synthase (2)

2.6.1.9 Histidinol-phosphate transaminase (1)

2.7.1.- Phosphotransferases with an alcohol group as acceptor. (1)

2.7.1.100 S-methyl-5-thioribose kinase (1)

2.7.1.107 Diacylglycerol kinase (2)

2.7.1.11 6-phosphofructokinase (1)

2.7.1.113 Deoxyguanosine kinase (1)

2.7.1.12 Gluconokinase (1)

2.7.1.148 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase (1)

2.7.1.15 Ribokinase (1)

2.7.1.156 Adenosylcobinamide kinase (2)

2.7.1.2 Glucokinase (2)

2.7.1.21 Thymidine kinase (1)

2.7.1.23 NAD(+) kinase (2)

2.7.1.24 Dephospho-CoA kinase (1)

2.7.1.25 Adenylyl-sulfate kinase (1)

2.7.1.26 Riboflavin kinase (1)

2.7.1.30 Glycerol kinase (1)

2.7.1.31 Glycerate kinase (1)

2.7.1.33 Pantothenate kinase (2)

2.7.1.35 Pyridoxal kinase (1)

2.7.1.39 Homoserine kinase (1)

2.7.1.4 Fructokinase (1)

2.7.1.40 Pyruvate kinase (1)

2.7.1.48 Uridine kinase (1)

2.7.1.50 Hydroxyethylthiazole kinase (1)

2.7.1.56 1-phosphofructokinase (2)

2.7.1.69 Protein-N(pi)-phosphohistidine--sugar phosphotransferase (8)

2.7.1.71 Shikimate kinase (1)

2.7.1.74 Deoxycytidine kinase (1)

2.7.1.76 Deoxyadenosine kinase (1)

2.7.10.2 Non-specific protein-tyrosine kinase (2)

2.7.11.- Protein-serine/threonine kinases. (1)

2.7.11.1 Non-specific serine/threonine protein kinase (5)

2.7.13.3 Histidine kinase (3)

2.7.2.1 Acetate kinase (1)

2.7.2.11 Glutamate 5-kinase (1)

2.7.2.2 Carbamate kinase (1)

2.7.2.3 Phosphoglycerate kinase (1)

2.7.2.4 Aspartate kinase (3)

2.7.2.8 Acetylglutamate kinase (1)

2.7.3.- Phosphotransferases with a nitrogenous group as acceptor. (86)

2.7.3.9 Phosphoenolpyruvate--protein phosphotransferase (3)

2.7.4.- Phosphotransferases with a phosphate group as acceptor. (2)

2.7.4.14 Cytidylate kinase (1)

2.7.4.16 Thiamine-phosphate kinase (1)

2.7.4.3 Adenylate kinase (1)

2.7.4.6 Nucleoside-diphosphate kinase (1)

2.7.4.7 Phosphomethylpyrimidine kinase (1)

2.7.4.8 Guanylate kinase (1)

2.7.4.9 dTMP kinase (1)

2.7.6.1 Ribose-phosphate diphosphokinase (1)

2.7.6.2 Thiamine diphosphokinase (1)

2.7.6.3 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase (1)

2.7.6.5 GTP diphosphokinase (2)

2.7.7.- Nucleotidyltransferases. (3)

2.7.7.13 Mannose-1-phosphate guanylyltransferase (1)

2.7.7.18 Nicotinate-nucleotide adenylyltransferase (1)

2.7.7.22 Mannose-1-phosphate guanylyltransferase (GDP) (1)

2.7.7.23 UDP-N-acetylglucosamine diphosphorylase (2)

2.7.7.24 Glucose-1-phosphate thymidylyltransferase (1)

2.7.7.25 tRNA adenylyltransferase (1)

2.7.7.3 Pantetheine-phosphate adenylyltransferase (1)

2.7.7.33 Glucose-1-phosphate cytidylyltransferase (1)

2.7.7.4 Sulfate adenylyltransferase (2)

2.7.7.41 Phosphatidate cytidylyltransferase (1)

2.7.7.43 N-acylneuraminate cytidylyltransferase (1)

2.7.7.56 tRNA nucleotidyltransferase (1)

2.7.7.6 DNA-directed RNA polymerase (5)

2.7.7.60 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (1)

2.7.7.62 Adenosylcobinamide-phosphate guanylyltransferase (2)

2.7.7.7 DNA-directed DNA polymerase (8)

2.7.7.8 Polyribonucleotide nucleotidyltransferase (1)

2.7.8.- Transferases for other substituted phosphate groups. (5)

2.7.8.13 Phospho-N-acetylmuramoyl-pentapeptide-transferase (1)

2.7.8.5 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (1)

2.7.8.7 Holo-[acyl-carrier-protein] synthase (1)

2.7.8.8 CDP-diacylglycerol--serine O-phosphatidyltransferase (1)

2.7.9.2 Pyruvate, water dikinase (1)

2.8.1.2 3-mercaptopyruvate sulfurtransferase (1)

2.8.1.6 Biotin synthase (1)

2.8.1.7 Cysteine desulfurase (1)

2.8.1.8 Lipoyl synthase (1)

2.8.3.5 3-oxoacid CoA-transferase (2)

2.8.3.8 Acetate CoA-transferase (5)

EC 3 (222)

3.1.1.- Carboxylic ester hydrolases. (1)

3.1.1.1 Carboxylesterase (1)

3.1.1.29 Aminoacyl-tRNA hydrolase (1)

3.1.1.61 Protein-glutamate methylesterase (1)

3.1.11.- Exodeoxyribonucleases producing 5'-phosphomonoesters. (1)

3.1.11.2 Exodeoxyribonuclease III (1)

3.1.11.6 Exodeoxyribonuclease VII (2)

3.1.2.- Thiolester hydrolases. (2)

3.1.2.1 Acetyl-CoA hydrolase (1)

3.1.21.- Endodeoxyribonucleases producing 5'-phosphomonoesters. (1)

3.1.21.2 Deoxyribonuclease IV (phage-T(4)-induced) (2)

3.1.21.3 Type I site-specific deoxyribonuclease (1)

3.1.22.4 Crossover junction endodeoxyribonuclease (1)

3.1.26.11 Ribonuclease Z (1)

3.1.26.3 Ribonuclease III (1)

3.1.26.4 Ribonuclease H (2)

3.1.26.5 Ribonuclease P (1)

3.1.26.8 Ribonuclease M5 (1)

3.1.3.- Phosphoric monoester hydrolases. (3)

3.1.3.1 Alkaline phosphatase (1)

3.1.3.11 Fructose-bisphosphatase (2)

3.1.3.15 Histidinol-phosphatase (1)

3.1.3.16 Phosphoprotein phosphatase (2)

3.1.3.18 Phosphoglycolate phosphatase (1)

3.1.3.25 Inositol-phosphate phosphatase (3)

3.1.3.3 Phosphoserine phosphatase (1)

3.1.3.41 4-nitrophenylphosphatase (1)

3.1.3.48 Protein-tyrosine-phosphatase (2)

3.1.3.5 5'-nucleotidase (1)

3.1.3.71 2-phosphosulfolactate phosphatase (1)

3.1.3.73 Alpha-ribazole phosphatase (1)

3.1.31.1 Micrococcal nuclease (2)

3.1.4.- Phosphoric diester hydrolases. (1)

3.1.4.16 2',3'-cyclic-nucleotide 2'-phosphodiesterase (3)

3.1.4.46 Glycerophosphodiester phosphodiesterase (3)

3.1.6.- Sulfuric ester hydrolases. (1)

3.11.1.1 Phosphonoacetaldehyde hydrolase (1)

3.2.1.14 Chitinase (2)

3.2.1.22 Alpha-galactosidase (1)

3.2.1.23 Beta-galactosidase (1)

3.2.1.52 Beta-N-acetylhexosaminidase (1)

3.2.1.86 6-phospho-beta-glucosidase (1)

3.2.2.- Hydrolyzing N-glycosyl compounds. (2)

3.2.2.1 Purine nucleosidase (1)

3.2.2.20 DNA-3-methyladenine glycosylase I (1)

3.2.2.21 DNA-3-methyladenine glycosylase II (2)

3.2.2.23 DNA-formamidopyrimidine glycosylase (2)

3.2.2.9 Adenosylhomocysteine nucleosidase (1)

3.3.1.1 Adenosylhomocysteinase (1)

3.4.11.- Aminopeptidases. (5)

3.4.11.1 Leucyl aminopeptidase (1)

3.4.11.14 Cytosol alanyl aminopeptidase (1)

3.4.11.18 Methionyl aminopeptidase (3)

3.4.11.5 Prolyl aminopeptidase (1)

3.4.14.- Dipeptidyl-peptidases and tripeptidyl-peptidases. (1)

3.4.16.4 Serine-type D-Ala-D-Ala carboxypeptidase (9)

3.4.19.- Omega peptidases. (1)

3.4.19.3 Pyroglutamyl-peptidase I (1)

3.4.21.- Serine endopeptidases. (11)

3.4.21.102 C-terminal processing peptidase (2)

3.4.21.53 Endopeptidase La (1)

3.4.21.88 Repressor lexA (1)

3.4.21.89 Signal peptidase I (3)

3.4.21.92 Endopeptidase Clp (3)

3.4.23.- Aspartic endopeptidases. (1)

3.4.23.36 Signal peptidase II (1)

3.4.24.- Metalloendopeptidases. (9)

3.4.24.28 Bacillolysin (1)

3.4.24.3 Microbial collagenase (2)

3.4.24.57 O-sialoglycoprotein endopeptidase (1)

3.4.24.78 GPR endopeptidase (1)

3.4.25.- Threonine endopeptidases. (1)

3.4.99.- Endopeptidases of unknown catalytic mechanism. (1)

3.5.1.- In linear amides. (7)

3.5.1.1 Asparaginase (1)

3.5.1.10 Formyltetrahydrofolate deformylase (1)

3.5.1.14 Aminoacylase (1)

3.5.1.16 Acetylornithine deacetylase (1)

3.5.1.19 Nicotinamidase (1)

3.5.1.2 Glutaminase (2)

3.5.1.25 N-acetylglucosamine-6-phosphate deacetylase (1)

3.5.1.28 N-acetylmuramoyl-L-alanine amidase (8)

3.5.1.6 Beta-ureidopropionase (1)

3.5.1.87 N-carbamoyl-L-amino-acid hydrolase (2)

3.5.1.88 Peptide deformylase (3)

3.5.2.2 Dihydropyrimidinase (1)

3.5.2.3 Dihydroorotase (1)

3.5.2.6 Beta-lactamase (2)

3.5.2.7 Imidazolonepropionase (1)

3.5.3.1 Arginase (1)

3.5.3.11 Agmatinase (1)

3.5.3.18 Dimethylargininase (1)

3.5.4.1 Cytosine deaminase (1)

3.5.4.16 GTP cyclohydrolase I (1)

3.5.4.19 Phosphoribosyl-AMP cyclohydrolase (1)

3.5.4.2 Adenine deaminase (2)

3.5.4.25 GTP cyclohydrolase II (1)

3.5.4.26 Diaminohydroxyphosphoribosylaminopyrimidine deaminase (1)

3.5.4.3 Guanine deaminase (1)

3.5.4.5 Cytidine deaminase (1)

3.5.4.9 Methenyltetrahydrofolate cyclohydrolase (1)

3.5.5.1 Nitrilase (1)

3.5.99.2 Thiaminase (1)

3.5.99.6 Glucosamine-6-phosphate deaminase (1)

3.6.1.- In phosphorous-containing anhydrides. (9)

3.6.1.1 Inorganic diphosphatase (2)

3.6.1.13 ADP-ribose diphosphatase (2)

3.6.1.15 Nucleoside-triphosphatase (1)

3.6.1.17 Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) (1)

3.6.1.23 dUTP diphosphatase (1)

3.6.1.27 Undecaprenyl-diphosphatase (3)

3.6.1.31 Phosphoribosyl-ATP diphosphatase (1)

3.6.3.12 Potassium-transporting ATPase (3)

3.6.3.14 H(+)-transporting two-sector ATPase (9)

3.6.3.25 Sulfate-transporting ATPase (1)

3.6.3.27 Phosphate-transporting ATPase (2)

3.6.3.29 Molybdate-transporting ATPase (1)

3.6.3.32 Quaternary-amine-transporting ATPase (2)

3.6.3.4 Copper-exporting ATPase (1)

3.7.1.3 Kynureninase (1)

3.8.1.- In C-halide compounds. (1)

EC 4 (98)

4.1.1.- Carboxy-lyases. (1)

4.1.1.11 Aspartate 1-decarboxylase (2)

4.1.1.19 Arginine decarboxylase (2)

4.1.1.20 Diaminopimelate decarboxylase (1)

4.1.1.21 Phosphoribosylaminoimidazole carboxylase (2)

4.1.1.23 Orotidine-5'-phosphate decarboxylase (1)

4.1.1.36 Phosphopantothenoylcysteine decarboxylase (1)

4.1.1.37 Uroporphyrinogen decarboxylase (1)

4.1.1.44 4-carboxymuconolactone decarboxylase (2)

4.1.1.45 Aminocarboxymuconate-semialdehyde decarboxylase (1)

4.1.1.48 Indole-3-glycerol-phosphate synthase (1)

4.1.1.49 Phosphoenolpyruvate carboxykinase (ATP) (1)

4.1.1.5 Acetolactate decarboxylase (1)

4.1.1.50 Adenosylmethionine decarboxylase (2)

4.1.1.65 Phosphatidylserine decarboxylase (1)

4.1.1.77 4-oxalocrotonate decarboxylase (1)

4.1.1.81 Threonine-phosphate decarboxylase (1)

4.1.2.13 Fructose-bisphosphate aldolase (1)

4.1.2.25 Dihydroneopterin aldolase (1)

4.1.2.4 Deoxyribose-phosphate aldolase (1)

4.1.2.5 Threonine aldolase (2)

4.1.3.- Oxo-acid-lyases. (2)

4.1.3.1 Isocitrate lyase (1)

4.1.3.27 Anthranilate synthase (2)

4.1.3.38 Aminodeoxychorismate lyase (1)

4.1.3.4 Hydroxymethylglutaryl-CoA lyase (1)

4.1.99.- Other carbon-carbon lyases. (1)

4.1.99.12 3,4-dihydroxy-2-butanone-4-phosphate synthase (1)

4.1.99.3 Deoxyribodipyrimidine photo-lyase (1)

4.2.1.- Hydro-lyases. (4)

4.2.1.1 Carbonate dehydratase (1)

4.2.1.10 3-dehydroquinate dehydratase (1)

4.2.1.11 Phosphopyruvate hydratase (1)

4.2.1.17 Enoyl-CoA hydratase (4)

4.2.1.19 Imidazoleglycerol-phosphate dehydratase (1)

4.2.1.2 Fumarate hydratase (2)

4.2.1.20 Tryptophan synthase (2)

4.2.1.22 Cystathionine beta-synthase (1)

4.2.1.24 Porphobilinogen synthase (1)

4.2.1.3 Aconitate hydratase (1)

4.2.1.33 3-isopropylmalate dehydratase (2)

4.2.1.45 CDP-glucose 4,6-dehydratase (1)

4.2.1.46 dTDP-glucose 4,6-dehydratase (1)

4.2.1.47 GDP-mannose 4,6-dehydratase (1)

4.2.1.49 Urocanate hydratase (1)

4.2.1.51 Prephenate dehydratase (2)

4.2.1.52 Dihydrodipicolinate synthase (2)

4.2.1.55 3-hydroxybutyryl-CoA dehydratase (1)

4.2.1.75 Uroporphyrinogen-III synthase (1)

4.2.1.9 Dihydroxy-acid dehydratase (1)

4.2.1.91 Arogenate dehydratase (1)

4.2.3.1 Threonine synthase (1)

4.2.3.3 Methylglyoxal synthase (1)

4.2.3.4 3-dehydroquinate synthase (1)

4.2.3.5 Chorismate synthase (1)

4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase (1)

4.3.1.1 Aspartate ammonia-lyase (1)

4.3.1.12 Ornithine cyclodeaminase (2)

4.3.1.15 Diaminopropionate ammonia-lyase (1)

4.3.1.17 L-serine ammonia-lyase (2)

4.3.1.18 D-serine ammonia-lyase (1)

4.3.1.19 Threonine ammonia-lyase (1)

4.3.1.3 Histidine ammonia-lyase (1)

4.3.1.7 Ethanolamine ammonia-lyase (3)

4.3.2.1 Argininosuccinate lyase (3)

4.3.2.2 Adenylosuccinate lyase (1)

4.4.1.1 Cystathionine gamma-lyase (1)

4.4.1.11 Methionine gamma-lyase (1)

4.4.1.19 Phosphosulfolactate synthase (1)

4.4.1.8 Cystathionine beta-lyase (1)

4.6.1.12 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (1)

4.99.1.1 Ferrochelatase (2)

EC 5 (55)

5.1.1.- Acting on amino acids and derivatives. (1)

5.1.1.1 Alanine racemase (2)

5.1.1.11 Phenylalanine racemase (ATP-hydrolyzing) (2)

5.1.1.3 Glutamate racemase (1)

5.1.1.7 Diaminopimelate epimerase (2)

5.1.2.2 Mandelate racemase (1)

5.1.3.1 Ribulose-phosphate 3-epimerase (1)

5.1.3.14 UDP-N-acetylglucosamine 2-epimerase (2)

5.2.1.8 Peptidylprolyl isomerase (2)

5.3.1.1 Triose-phosphate isomerase (1)

5.3.1.16 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (1)

5.3.1.23 S-methyl-5-thioribose-1-phosphate isomerase (1)

5.3.1.24 Phosphoribosylanthranilate isomerase (1)

5.3.1.6 Ribose-5-phosphate isomerase (1)

5.3.1.9 Glucose-6-phosphate isomerase (2)

5.3.2.- Interconverting keto- and enol- groups. (2)

5.3.3.2 Isopentenyl-diphosphate Delta-isomerase (1)

5.4.2.1 Phosphoglycerate mutase (2)

5.4.2.10 Phosphoglucosamine mutase (1)

5.4.2.2 Phosphoglucomutase (1)

5.4.2.7 Phosphopentomutase (1)

5.4.2.8 Phosphomannomutase (1)

5.4.3.2 Lysine 2,3-aminomutase (1)

5.4.3.8 Glutamate-1-semialdehyde 2,1-aminomutase (2)

5.4.99.- Transferring other groups. (8)

5.4.99.12 tRNA-pseudouridine synthase I (1)

5.4.99.17 Squalene--hopene cyclase (1)

5.4.99.2 Methylmalonyl-CoA mutase (3)

5.4.99.5 Chorismate mutase (2)

5.99.1.- Sole sub-subclass for isomerases that do not belong in the other subclasses. (2)

5.99.1.2 DNA topoisomerase (3)

5.99.1.3 DNA topoisomerase (ATP-hydrolyzing) (2)

EC 6 (82)

6.1.1.1 Tyrosine--tRNA ligase (1)

6.1.1.10 Methionine--tRNA ligase (1)

6.1.1.11 Serine--tRNA ligase (1)

6.1.1.12 Aspartate--tRNA ligase (1)

6.1.1.14 Glycine--tRNA ligase (2)

6.1.1.15 Proline--tRNA ligase (2)

6.1.1.16 Cysteine--tRNA ligase (1)

6.1.1.17 Glutamate--tRNA ligase (1)

6.1.1.18 Glutamine--tRNA ligase (1)

6.1.1.19 Arginine--tRNA ligase (1)

6.1.1.2 Tryptophan--tRNA ligase (1)

6.1.1.20 Phenylalanine--tRNA ligase (2)

6.1.1.21 Histidine--tRNA ligase (2)

6.1.1.22 Asparagine--tRNA ligase (1)

6.1.1.3 Threonine--tRNA ligase (1)

6.1.1.4 Leucine--tRNA ligase (1)

6.1.1.5 Isoleucine--tRNA ligase (2)

6.1.1.6 Lysine--tRNA ligase (1)

6.1.1.7 Alanine--tRNA ligase (1)

6.1.1.9 Valine--tRNA ligase (1)

6.2.1.1 Acetate--CoA ligase (2)

6.2.1.20 Long-chain-fatty-acid--[acyl-carrier-protein] ligase (1)

6.2.1.26 o-succinylbenzoate--CoA ligase (1)

6.2.1.3 Long-chain-fatty-acid--CoA ligase (5)

6.2.1.30 Phenylacetate--CoA ligase (1)

6.2.1.5 Succinate--CoA ligase (ADP-forming) (2)

6.3.1.2 Glutamate--ammonia ligase (2)

6.3.2.1 Pantoate--beta-alanine ligase (1)

6.3.2.10 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (1)

6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase (1)

6.3.2.17 Tetrahydrofolate synthase (1)

6.3.2.4 D-alanine--D-alanine ligase (2)

6.3.2.5 Phosphopantothenate--cysteine ligase (1)

6.3.2.6 Phosphoribosylaminoimidazolesuccinocarboxamide synthase (1)

6.3.2.8 UDP-N-acetylmuramate--L-alanine ligase (1)

6.3.2.9 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase (1)

6.3.3.1 Phosphoribosylformylglycinamidine cyclo-ligase (1)

6.3.3.3 Dethiobiotin synthase (1)

6.3.4.- Other carbon--nitrogen ligases. (1)

6.3.4.13 Phosphoribosylamine--glycine ligase (1)

6.3.4.14 Biotin carboxylase (2)

6.3.4.15 Biotin--[acetyl-CoA-carboxylase] ligase (1)

6.3.4.2 CTP synthase (1)

6.3.4.3 Formate--tetrahydrofolate ligase (1)

6.3.4.4 Adenylosuccinate synthase (1)

6.3.4.5 Argininosuccinate synthase (1)

6.3.5.- Carbon--nitrogen ligases with glutamine as amido-N-donor. (3)

6.3.5.1 NAD(+) synthase (glutamine-hydrolyzing) (1)

6.3.5.2 GMP synthase (glutamine-hydrolyzing) (1)

6.3.5.3 Phosphoribosylformylglycinamidine synthase (3)

6.3.5.4 Asparagine synthase (glutamine-hydrolyzing) (3)

6.3.5.5 Carbamoyl-phosphate synthase (glutamine-hydrolyzing) (3)

6.4.1.1 Pyruvate carboxylase (1)

6.4.1.2 Acetyl-CoA carboxylase (3)

6.4.1.3 Propionyl-CoA carboxylase (2)

6.5.1.1 DNA ligase (ATP) (1)

6.5.1.2 DNA ligase (NAD(+)) (1)

Motif (InterPro result)

(

(2R)-phospho-3-sulpholactate synthase, ComA (1)

(Uracil-5)-methyltransferase (2)

1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase (1)

1-acyl-sn-glycerol-3-phosphate acyltransferase (1)

1-aminocyclopropane-1-carboxylate synthase (4)

1-deoxy-D-xylulose 5-phosphate reductoisomerase (1)

1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal (1)

1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal (1)

16S rRNA processing protein RimM (1)

2 ,3 -cyclic-nucleotide 2 -phosphodiesterase (1)

2',5' RNA ligase (1)

2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core (1)

2-aminoethylphosphonate--pyruvate transaminase (1)

2-isopropylmalate synthase/homocitrate synthase related (1)

2-methylcitrate synthase/citrate synthase II (1)

2-nitropropane dioxygenase, NPD (3)

2-oxo acid dehydrogenase, lipoyl-binding site (5)

2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate (1)

2-phosphosulpholactate phosphatase (2)

20S proteasome, A and B subunits (1)

23S rRNA methyltransferase/RumA (2)

2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (1)

2Fe-2S ferredoxin, iron-sulphur binding site (1)

2OG-Fe(II) oxygenase (1)

3'-5' exonuclease (1)

3,4-Dihydroxy-2-butanone 4-phosphate synthase (1)

3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III (4)

3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (4)

3-dehydroquinate synthase AroB (1)

3-demethylubiquinone-9 3-O-methyltransferase (2)

3-hydroxyacid dehydrogenase/reductase (4)

3-hydroxyacyl-CoA dehydrogenase (2)

3-hydroxyacyl-CoA dehydrogenase, C-terminal (5)

3-hydroxyacyl-CoA dehydrogenase, NAD-binding (5)

3-hydroxyanthranilic acid dioxygenase (1)

3-hydroxybutyrate dehydrogenase (1)

3-hydroxyisobutyrate dehydrogenase-related (3)

3-isopropylmalate dehydratase, large subunit (1)

3-isopropylmalate dehydratase, large subunit region (1)

3-isopropylmalate dehydratase, small subunit (1)

3-isopropylmalate dehydratase, small subunit region (1)

3-isopropylmalate dehydrogenase (1)

3-oxoacid CoA-transferase, subunit A (3)

3-oxoacid CoA-transferase, subunit B (3)

3-oxoacyl-(acyl-carrier-protein) reductase (1)

3-phosphoshikimate 1-carboxyvinyltransferase (5)

3-phosphoshikimate 1-carboxyvinyltransferase, subgroup (1)

3D (3)

3Fe-4S ferredoxin (1)

4'-phosphopantetheinyl transferase (3)

4-diphosphocytidyl-2-methyl-D-erythritol synthase (1)

4-diphosphocytidyl-2C-methyl-D-erythritol kinase (1)

4-diphosphocytidyl-2C-methyl-D-erythritol synthase (1)

4-hydroxybenzoate polyprenyltransferase related (1)

4-hydroxybenzoyl-CoA thioesterase (2)

4-hydroxybenzoyl-CoA thioesterase, active site (1)

4-hydroxyphenylacetate 3-hydroxylase (1)

4-hydroxyphenylpyruvate dioxygenase (2)

4-oxalocrotonate tautomerase (1)

4-vinyl reductase, 4VR (1)

4Fe-4S cluster binding (1)

4Fe-4S ferredoxin, iron-sulphur binding (10)

5'-3' exonuclease (2)

5'-Nucleotidase and apyrase (5)

5'-Nucleotidase, C-terminal (4)

5'-Nucleotidase, N-terminal (2)

5-formyltetrahydrofolate cyclo-ligase (1)

5-methyltetrahydrofolate--homocysteine methyltransferase (1)

5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (1)

5-methylthioribose kinase (1)

5TM Receptors of the LytS-YhcK type, transmembrane region (3)

6,7-dimethyl-8-ribityllumazine synthase (1)

6-phosphofructokinase (1)

6-phosphogluconate dehydrogenase (2)

6-phosphogluconate dehydrogenase related protein (1)

6-phosphogluconate dehydrogenase, C-terminal (1)

6-phosphogluconate dehydrogenase, C-terminal-like (21)

6-phosphogluconate dehydrogenase, NAD-binding (4)

6-phosphogluconate-binding site (1)

6-pyruvoyl tetrahydropterin synthase and hypothetical protein (1)

60 kDa inner membrane insertion protein (1)

7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK (1)

8-amino-7-oxononanoate synthase (1)

8-oxoguanine DNA glycosylase, N-terminal (1)

A/G-specific adenine glycosylase MutY, bacterial form (1)

AAA ATPase, core (13)

AAA ATPase, subdomain (2)

AAA+ ATPase, core (199)

ABC transporter related (147)

ABC transporter substrate binding protein (2)

ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC (1)

ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD (1)

ABC transporter, substrate-binding protein, aliphatic sulphonates (1)

ABC transporter, sulphate/thiosulphate import, ATP-binding protein cysA, C-terminal (1)

ABC transporter, transmembrane region (12)

ABC transporter, transmembrane region, type 1 (17)

ABC-2 (5)

ABC-2 transporter (1)

ABC-2 type transporter (8)

ABC-3 (2)

ADP-ribosylation/Crystallin J1 (1)

ADP-ribosylglycohydrolase (1)

AFG1-like ATPase (1)

AICARFT/IMPCHase bienzyme (1)

AICARFT/IMPCHase bienzyme, formylation region (1)

AIR synthase related protein (3)

AIR synthase related protein, C-terminal (3)

AMP-dependent synthetase and ligase (33)

ANTAR (1)

AP endonuclease, family 1 (1)

AP endonuclease, family 2 (2)

AP endonuclease, family 2, C-terminal (1)

ATP dependent DNA ligase, C-terminal (1)

ATP dependent DNA ligase, central (3)

ATP phosphoribosyltransferase, catalytic region (1)

ATP-NAD/AcoX kinase (2)

ATP-binding region, ATPase-like (99)

ATP-citrate lyase/succinyl-CoA ligase (2)

ATP-cone (1)

ATP-dependent DNA ligase (2)

ATP-dependent nuclease subunit AddB (1)

ATP-dependent phosphofructokinase, prokaryotic (1)

ATP-grasp fold (17)

ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type (2)

ATP-grasp fold, DUF201-type (3)

ATP-grasp fold, subdomain 1 (2)

ATP-grasp fold, subdomain 2 (13)

ATP-grasp fold, succinyl-CoA synthetase-type (1)

ATP-sulphurylase (2)

ATP:guanido phosphotransferase (1)

ATPase AAA-2 (4)

ATPase associated with various cellular activities, AAA-3 (4)

ATPase associated with various cellular activities, AAA-4 (1)

ATPase associated with various cellular activities, AAA-5 (4)

ATPase, BadF/BadG/BcrA/BcrD type (2)

ATPase, F0 complex, subunit A (1)

ATPase, F0 complex, subunit B, bacterial (1)

ATPase, F0 complex, subunit B/B', bacterial and chloroplast (1)

ATPase, F0 complex, subunit C (1)

ATPase, F0 complex, subunit C, bacterial and chloroplast (1)

ATPase, F0 complex, subunit I, bacillus-type (1)

ATPase, F0/V0 complex, subunit C (1)

ATPase, F1 complex, OSCP/delta subunit (1)

ATPase, F1 complex, alpha subunit (1)

ATPase, F1 complex, beta subunit (1)

ATPase, F1 complex, delta/epsilon subunit (1)

ATPase, F1 complex, gamma subunit (1)

ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (3)

ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (3)

ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding (4)

ATPase, P type cation/copper-transporter (1)

ATPase, P-type cation-transporter, C-terminal (1)

ATPase, P-type cation-transporter, N-terminal (1)

ATPase, P-type copper-transporter (1)

ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (6)

ATPase, cell wall biosynthesis (1)

AbgT putative transporter (1)

Abortive infection protein (8)

Accessory gene regulator B (1)

Acetaldehyde dehydrogenase (1)

Acetaldehyde dehydrogenase, C-terminal (1)

Acetaldehyde dehydrogenase, acetylating (1)

Acetamidase/Formamidase (2)

Acetate and butyrate kinase (1)

Acetate kinase (1)

Acetohydroxy acid isomeroreductase (1)

Acetohydroxy acid isomeroreductase C-terminal (1)

Acetohydroxy acid isomeroreductase, catalytic (1)

Acetoin utilisation ACUC protein (1)

Acetolactate synthase, large subunit, biosynthetic (1)

Acetolactate synthase, small subunit (1)

Acetyl-CoA biotin carboxyl carrier (2)

Acetyl-CoA carboxylase carboxyl transferase, beta subunit (1)

Acetyl-CoA carboxylase, alpha subunit (2)

Acetyl-CoA carboxylase, biotin carboxylase (2)

Acetyl-CoA hydrolase/transferase (1)

Acetyl-coenzyme A carboxyltransferase, C-terminal (4)

Acetyl-coenzyme A carboxyltransferase, N-terminal (3)

Acetylglutamate kinase (1)

Acetylornithine and succinylornithine aminotransferase (2)

Acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase (4)

Acid phosphatase/vanadium-dependent haloperoxidase (2)

Acid phosphatase/vanadium-dependent haloperoxidase related (2)

Acid-soluble spore protein, gamma-type (1)

Acireductone dioxygenase, ARD (1)

Aconitase/homoaconitase (1)

Aconitate hydratase 1 (1)

Aconitate hydratase, C-terminal (2)

Aconitate hydratase, N-terminal (2)

Acriflavin resistance protein (6)

Actin-binding, actinin-type (1)

Actin/actin-like (1)

Activator of Hsp90 ATPase homologue 1-like (9)

Acyl carrier protein (ACP) (1)

Acyl carrier protein-like (30)

Acyl transferase (3)

Acyl transferase region (3)

Acyl-CoA dehydrogenase (6)

Acyl-CoA dehydrogenase, N-terminal (5)

Acyl-CoA dehydrogenase, type 1 (5)

Acyl-CoA dehydrogenase, type1/2, C-terminal (6)

Acyl-CoA dehydrogenase/oxidase C-terminal (5)

Acyl-CoA dehydrogenase/oxidase, N-terminal (4)

Acyl-CoA dehydrogenase/oxidase, central region (6)

Acyl-CoA dehydrogenase/oxidase, middle and N-terminal (6)

Acyl-CoA thioester hydrolase/bile acid-CoA amino acid N-acetyltransferase (1)

Acylneuraminate cytidylyltransferase (1)

Acyltransferase 3 (3)

Ada, metal-binding (2)

Adenine modification methylase, M.EcoRV (1)

Adenine phosphoribosyl transferase (1)

Adenosine/AMP deaminase active site (1)

Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase (1)

Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR (1)

Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, PduO-type (1)

Adenosylmethionine--8-amino-7-oxononanoate aminotransferase (1)

Adenylate kinase (1)

Adenylate kinase, lid region (1)

Adenylate kinase, subfamily (1)

Adenylate/cytidine kinase, N-terminal (2)

Adenylosuccinate lyase (1)

Adenylosuccinate synthetase (1)

Adenylyl cyclase class-3/4/guanylyl cyclase (1)

Adenylylsulphate kinase (1)

Adenylylsulphate kinase, C-terminal (1)

Adenylylsulphate reductase, thioredoxin dependent (2)

Adhesin B (2)

Adhesion lipoprotein (2)

Adhesion, bacterial (1)

Adrenodoxin reductase (9)

Alanine dehydrogenase and pyridine nucleotide transhydrogenase (1)

Alanine dehydrogenase/PNT, C-terminal (2)

Alanine dehydrogenase/PNT, C-terminal subdomain (1)

Alanine dehydrogenase/PNT, N-terminal (1)

Alanine racemase (2)

Alanine racemase region (3)

Alanine racemase, C-terminal (3)

Alanine racemase, N-terminal (4)

Alanine racemase/group IV decarboxylase, C-terminal (5)

Alanyl-tRNA synthetase, class IIc (2)

Alcohol dehydrogenase GroES-like (8)

Alcohol dehydrogenase superfamily, zinc-containing (8)

Alcohol dehydrogenase, zinc-binding (8)

Alcohol dehydrogenase, zinc-containing (4)

Alcohol dehydrogenase. zinc-binding type 1 (1)

Aldehyde Dehydrogenase_ (16)

Aldehyde dehydrogenase (20)

Aldo/keto reductase (10)

Aldolase-type TIM barrel (58)

Alkaline phosphatase (8)

Alkyl hydroperoxide reductase, subunit F (1)

Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (11)

Alkylbase DNA glycosidase (1)

Alkylhydroperoxidase AhpD core (4)

Allophanate hydrolase subunit 1 (1)

Allophanate hydrolase subunit 2 (1)

Alpha-acetolactate decarboxylase (1)

Alpha-helical ferredoxin (7)

Alpha-hydroxy acid dehydrogenase, FMN-dependent (1)

Alpha-isopropylmalate/homocitrate synthase (4)

Alpha/beta hydrolase (13)

Alpha/beta hydrolase fold-1 (21)

Alpha/beta hydrolase fold-3 (3)

Aluminium resistance (1)

Amidase signature enzyme (3)

Amidase, hydantoinase/carbamoylase (2)

Amidinotransferase (2)

Amidohydrolase 1 (15)

Amidohydrolase 2 (4)

Amidohydrolase 3 (8)

Amidohydrolase-like (9)

Amidophosphoribosyl transferase (1)

Amine oxidase (3)

Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine (9)

Amino acid adenylation (21)

Amino acid permease (6)

Amino acid permease-associated region (11)

Amino acid-binding ACT (14)

Amino acid/polyamine transporter I (13)

Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (7)

Aminoacyl-tRNA synthetase, class I (10)

Aminoacyl-tRNA synthetase, class I (M) (1)

Aminoacyl-tRNA synthetase, class I, anticodon-binding (1)

Aminoacyl-tRNA synthetase, class II (11)

Aminoacyl-tRNA synthetase, class II (D, K and N) (3)

Aminoacyl-tRNA synthetase, class II (G, H, P and S) (7)

Aminoacyl-tRNA synthetase, class Ia (4)

Aminoacyl-tRNA synthetase, class Ib (2)

Aminodeoxychorismate lyase (1)

Aminoglycoside phosphotransferase (9)

Aminoglycoside/hydroxyurea antibiotic resistance kinase (1)

Aminotransferase class-III (10)

Aminotransferase, class I and II (28)

Aminotransferase, class IV (3)

Aminotransferase, class V (10)

Aminotransferase, class-II (2)

Aminotransferases, class-I, pyridoxal-phosphate-binding site (4)

Ammonium transporter (1)

Animal peptidoglycan recognition protein PGRP (1)

Anion-transporting ATPase (1)

Ankyrin (7)

Anthranilate phosphoribosyl transferase (1)

Anthranilate synthase component I (1)

Anthranilate synthase component I and chorismate binding protein (2)

Anthranilate synthase component I, N-terminal (2)

Anthranilate synthase component II/delta crystallin (4)

Anti-sigma B factor (1)

Anti-sigma F factor (1)

Anti-sigma F factor antagonist (1)

Anti-sigma factor antagonist (2)

Anti-sigma-28 factor, FlgM (1)

Antibiotic biosynthesis monooxygenase (3)

Anticodon-binding (7)

Antifreeze-like/N-acetylneuraminic acid synthase C-terminal (1)

Antioxidant Tpx (1)

ApbE-like lipoprotein (1)

Appr-1-p processing (1)

Aquaporin (1)

AraC protein, arabinose-binding/dimerisation (4)

ArgE/dapE/ACY1/CPG2/yscS (9)

ArgK protein (2)

Arginase (2)

Arginase, subgroup (1)

Arginine repressor (1)

Argininosuccinate lyase (3)

Argininosuccinate synthase (2)

Arginyl tRNA synthetase, class Ic, N-terminal (1)

Arginyl-tRNA synthetase, class Ic (1)

Armadillo-like helical (4)

Aromatic amino acid beta-eliminating lyase/threonine aldolase (4)

Aromatic-ring hydroxylase (4)

Arsenate reductase StaphA (thioredoxin) (1)

Arsenate reductase and related (2)

Arsenical pump membrane protein (3)

Arsenical-resistance protein ACR3 (1)

Arylamine N-acetyltransferase (1)

Asp/Glu racemase (3)

Asparaginase/glutaminase (3)

Asparagine synthase (3)

Asparagine synthase, glutamine-hydrolyzing (3)

Asparaginyl-tRNA synthetase, class IIb (1)

Aspartate ammonia-lyase (1)

Aspartate carbamoyltransferase, bacterial/plant (1)

Aspartate carbamoyltransferase, eukaryotic (1)

Aspartate decarboxylase (2)

Aspartate decarboxylase-like fold (5)

Aspartate kinase (3)

Aspartate kinase region (3)

Aspartate kinase, monofunctional class (2)

Aspartate racemase (2)

Aspartate-semialdehyde dehydrogenase (1)

Aspartate-semialdehyde dehydrogenase, bacterial (1)

Aspartate-semialdehyde dehydrogenase, conserved region (1)

Aspartate/glutamate/uridylate kinase (7)

Aspartate/ornithine carbamoyltransferase (2)

Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region (2)

Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding (2)

Aspartyl-tRNA synthetase, class IIb (2)

Aspartyl-tRNA synthetase, class IIb, bacterial/mitochondrial type (1)

Atrophin (1)

Auxin efflux carrier (2)

AzlC-like (1)

B3/4 (3)

BAAT/Acyl-CoA thioester hydrolase C-terminal (1)

BCCT transporter (1)

BFD-like [2Fe-2S]-binding region (2)

BPG-independent PGAM, N-terminal (1)

BRCT (1)

Bacillus/Clostridium GerA spore germination protein (13)

Bacitracin resistance protein BacA (2)

Bacterial 2-isopropylmalate synthase (2)

Bacterial 4-aminobutyrate aminotransferase (1)

Bacterial ABC transporter EcsB (1)

Bacterial DNA polymerase III, alpha subunit (2)

Bacterial DNA recombination protein RuvA (1)

Bacterial FdrA (1)

Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p (2)

Bacterial Ig-like, group 2 (11)

Bacterial RecJ exonuclease (1)

Bacterial SH3-like region (5)

Bacterial bifunctional deaminase-reductase, C-terminal (3)

Bacterial carbamate kinase (1)

Bacterial chemotaxis sensory transducer (29)

Bacterial chromosomal replication initiator protein, DnaA (1)

Bacterial conjugation TrbI-like protein (1)

Bacterial cytochrome c, class IC (1)

Bacterial export protein FliQ, family 3 (1)

Bacterial extracellular solute-binding protein, family 1 (18)

Bacterial extracellular solute-binding protein, family 3 (10)

Bacterial extracellular solute-binding protein, family 5 (34)

Bacterial inner-membrane translocator (15)

Bacterial luciferase-like (5)

Bacterial methyltransferase (1)

Bacterial microcompartments protein (4)

Bacterial pantothenate kinase (1)

Bacterial periplasmic spermidine/putrescine-binding protein (2)

Bacterial purine repressor, N-terminal (1)

Bacterial regulatory factor, effector (7)

Bacterial regulatory protein GntR, HTH (26)

Bacterial regulatory protein, ArsR (26)

Bacterial regulatory protein, Crp (7)

Bacterial regulatory protein, DeoR (6)

Bacterial regulatory protein, DeoR N-terminal (15)

Bacterial regulatory protein, LacI (6)

Bacterial regulatory protein, LuxR (22)

Bacterial regulatory protein, LysR (29)

Bacterial regulatory protein, MarR (28)

Bacterial regulatory protein, MerR (18)

Bacterial regulatory proteins, AsnC/Lrp (8)

Bacterial ribonuclease P protein (1)

Bacterial ribosomal protein S3 (1)

Bacterial sec-independent translocation protein mttA/Hcf106 (2)

Bacterial stress protein (4)

Bacterial sugar transferase (1)

Bacterial transcription activator, effector binding (7)

Bacterial transcriptional activator domain (3)

Bacterial transferase hexapeptide repeat (8)

Bacterial transketolase (1)

Bacterial transport system permease protein (18)

Bacterial trigger factor, C-terminal (1)

Bacterial trigger factor, N-terminal (1)

Bacterial type II secretion system protein (4)

Bacterial type II secretion system protein E (2)

Bacterial type III secretion FHIPEP (1)

Band 7 protein (2)

Basic membrane lipoprotein (3)

Benzoate membrane transport protein (1)

Beta tubulin, autoregulation binding site (6)

Beta-grasp fold, ferredoxin-type (9)

Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ (1)

Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ (1)

Beta-ketoacyl synthase (8)

Beta-ketoacyl synthase, C-terminal (10)

Beta-ketoacyl synthase, N-terminal (11)

Beta-ketoacyl-acyl carrier protein synthase III (FabH) (2)

Beta-lactamase (20)

Beta-lactamase, class A (1)

Beta-lactamase-like (30)

Beta-lactamase-type transpeptidase fold (41)

Bifunctional chorismate mutase/3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase (1)

Bifunctional phosphoglucose/phosphomannose isomerase (1)

Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase (1)

Bifunctional precorrin-2 oxidase/chelatase (1)

Bifunctional tetrapyrrole methylase/MazG NTP pyrophosphohydrolase (1)

Bifunctional uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase (1)

Bile acid:sodium symporter (3)

Binding-protein-dependent transport systems inner membrane component (80)

BioY protein (1)

Biotin and thiamin synthesis associated (1)

Biotin biosynthesis protein BioC (1)

Biotin carboxylase, C-terminal (4)

Biotin carboxylation region (4)

Biotin protein ligase, C-terminal (1)

Biotin synthase (1)

Biotin--acetyl-CoA-carboxylase ligase (1)

Biotin/lipoate A/B protein ligase (3)

Biotin/lipoyl attachment (10)

Blue (type 1) copper domain (3)

Blue (type 1) copper subtype (2)

Bo-type ubiquinol oxidase, subunit II (2)

Bordetella pertussis Bvg accessory factor (1)

Bordetella uptake gene (3)

Branched-chain amino acid aminotransferase II (1)

Branched-chain amino acid transport (1)

Branched-chain amino acid transport system II carrier protein (3)

Butirosin biosynthesis, BtrG-like (1)

C4-dicarboxylate anaerobic carrier (2)

CAT RNA-binding region (1)

CDP-alcohol phosphatidyltransferase (4)

CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (1)

CDP-diacylglycerol--serine O-phosphatidyltransferase (1)

CDP-glucose 4,6-dehydratase (1)

CMP/dCMP deaminase, zinc-binding (5)

CO dehydrogenase flavoprotein, C-terminal (1)

CRS1/YhbY (1)

CTP synthase (1)

Cache (14)

Cache, type 2 (1)

Cadherin (2)

Cadherin-like (2)

Cadmium-transporting ATPase (1)

Calcium-binding EF-hand (6)

Calcium/proton exchanger superfamily (1)

Calycin-like (1)

CamS sex pheromone cAM373 (1)

Camphor resistance CrcB protein (1)

Carbamoyl-phosphate synthase L chain, ATP-binding (11)

Carbamoyl-phosphate synthase, GATase region (4)

Carbamoyl-phosphate synthase, large subunit, glutamine-dependent (2)

Carbamoyl-phosphate synthase, small chain (2)

Carbamoyl-phosphate synthase, small subunit (2)

Carbamoyl-phosphate synthetase large chain (2)

Carbamoyl-phosphate synthetase large chain, N-terminal (6)

Carbamoyl-phosphate synthetase large chain, oligomerisation (2)

Carbohydrate kinase, FGGY (5)

Carbohydrate kinase, PfkB (6)

Carbohydrate-binding family V/XII (3)

Carbohydrate-binding-like fold (3)

Carbohydrate/purine kinase (6)

Carbon monoxide dehydrogenase subunit G (1)

Carbon starvation protein CstA (1)

Carbon storage regulator (1)

Carbonic anhydrase (1)

Carboxyl transferase (3)

Carboxylyase-related protein (1)

Carboxymuconolactone decarboxylase (7)

Carboxypeptidase, regulatory region (1)

Carboxypeptidase-like, regulatory region (3)

Catabolite control protein A (1)

Catalase (1)

Catalase, N-terminal (1)

Catalase, manganese (2)

Catalase-peroxidase haem (1)

Catalytic domain of components of various dehydrogenase complexes (4)

Cation efflux protein (4)

Cation transporter (2)

Cationic amino acid transporter (1)

CbxX/CfqX (3)

Cecropin (1)

Cell cycle control PP-loop ATPase MesJ/YaeO (1)

Cell cycle protein (3)

Cell division ATP-binding protein FtsE (1)

Cell division protein FtsA (2)

Cell division protein FtsQ (1)

Cell division protein FtsW (2)

Cell division protein FtsZ (1)

Cell division protein, FtsL -like (1)

Cell division transporter substrate-binding protein FtsY (1)

Cell divisionFtsK/SpoIIIE (2)

Cell envelope-related transcriptional attenuator (5)

Cell shape determining protein MreB/Mrl (2)

Cell surface antigen (3)

Cell surface receptor IPT/TIG (1)

Cell wall hydrolase, SleB (6)

Cell wall hydrolase/autolysin, catalytic (7)

Chalcone and stilbene synthases, C-terminal (1)

Chalcone and stilbene synthases, N-terminal (1)

Chaperone DnaJ (1)

Chaperone DnaJ, C-terminal (1)

Chaperone DnaK (1)

Chaperonin Cpn10 (1)

Chaperonin Cpn60 (1)

Chaperonin Cpn60/TCP-1 (1)

Chaperonin clpA/B (4)

CheC-like protein (3)

CheW-like protein (3)

CheY-like (91)

Chemotaxis methyl-accepting protein/Histidine kinase (8)

Chemotaxis protein CheD (1)

Chemotaxis response regulator protein-glutamate methylesterase (1)

Chemotaxis response regulator, CheB type (1)

Chitin-binding, domain 3 (1)

Chitinase II (5)

Chloramphenicol acetyltransferase (1)

Chlorite dismutase (1)

Chorismate binding, C-terminal (2)

Chorismate mutase (1)

Chorismate mutase of the AroH class (1)

Chorismate mutase, G-positive and Deinococcus (1)

Chorismate synthase (1)

Chromate transporter (1)

Chromate transporter region (3)

Chromosomal replication initiator, DnaA (1)

Chromosomal replication initiator, DnaA C-terminal (1)

Chromosome segregation protein SMC (1)

CinA, C-terminal (1)

Citrate synthase (2)

Citrate transporter (1)

Class I peptide chain release factor (2)

Class II aldolase/adducin, N-terminal (1)

Clostridium cellulosome enzyme, dockerin type I (1)

Clp, N-terminal (1)

ClpX, ATPase regulatory subunit (1)

CoA-binding (3)

CoA-transferase family III (1)

Coagulation factor 5/8 type, C-terminal (4)

Coat F (4)

Cob(II)yrinic acid a,c-diamide reductase (1)

CobB/CobQ-like glutamine amidotransferase (3)

Cobalamin (vitamin B12) biosynthesis CbiB (1)

Cobalamin (vitamin B12) biosynthesis CbiD (1)

Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase, core (1)

Cobalamin (vitamin B12) biosynthesis CbiG (1)

Cobalamin (vitamin B12) biosynthesis CbiG, core (1)

Cobalamin (vitamin B12) biosynthesis CbiM (1)

Cobalamin (vitamin B12) biosynthesis CbiT, precorrin-6Y methyltransferase_core (1)

Cobalamin (vitamin B12) biosynthesis CbiX (2)

Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase (1)

Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase, core (1)

Cobalamin (vitamin B12) biosynthesis CobI/CbiL, precorrin-2 C20-methyltransferase (1)

Cobalamin (vitamin B12) biosynthesis CobI/CbiL, precorrin-2 C20-methyltransferase, core (1)

Cobalamin (vitamin B12) biosynthesis CobJ/CibH, precorrin-3B C17-methyltransferase, core (1)

Cobalamin (vitamin B12) biosynthesis CobK/CbiJ, precorrin-6x reductase (1)

Cobalamin (vitamin B12) biosynthesis CobL, precorrin-6Y C5,15-methyltransferase (1)

Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase (1)

Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase, core (1)

Cobalamin (vitamin B12) biosynthesis CobS, cobalamin-5-phosphate synthase (1)

Cobalamin (vitamin B12) biosynthesis CobW-like (2)

Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal (2)

Cobalamin (vitamin B12)-binding (5)

Cobalamin (vitamin B12)-dependent enzyme, catalytic (3)

Cobalamin (vitamin B12)-independent methionine synthase MetE, N-terminal (1)

Cobalt ABC transporter CbiQ, permease subunit (1)

Cobalt transport protein (3)

Cobalt transport protein CbiN (1)

Cobaltochelatase/ferrochelatase CbiX/SirB (1)

Cobaltochelatase/ferrochelatase, CbiX/SirB long form (1)

Cobinamide kinase/cobinamide phosphate guanyltransferase (2)

Cobyric acid synthase CobQ (1)

Cobyrinic acid a,c-diamide synthase (5)

Cobyrinic acid a,c-diamide synthase CbiA (1)

CocE/NonD hydrolase (1)

Coenzyme A biosynthesis protein (1)

Coenzyme A transferase (6)

Coenzyme A transferase active site (1)

Coenzyme A transferase binding site (2)

Cof protein (5)

Cold shock protein (8)

Cold shock, CspA (6)

Cold-shock protein, DNA-binding (6)

Collagen binding (1)

Collagen triple helix repeat (2)

Collagen-binding surface protein Cna-like, B region (2)

ComEC/Rec2-related protein (1)

Competence protein ComEA helix-hairpin-helix region (1)

Competence-damaged protein (1)

Concanavalin A-like lectin/glucanase (2)

Concanavalin A-like lectin/glucanase, subgroup (1)

Concentrative nucleoside transporter (3)

Condensation domain (21)

Conserved carboxylase region (1)

Conserved hypothetical porotein YiiM, 3-alpha (1)

Conserved hypothetical protein 103 (1)

Conserved hypothetical protein 11 (1)

Conserved hypothetical protein 1125 (1)

Conserved hypothetical protein 1212 (1)

Conserved hypothetical protein 1440 (1)

Conserved hypothetical protein 147 (2)

Conserved hypothetical protein 1563 (2)

Conserved hypothetical protein 1655 (1)

Conserved hypothetical protein 2058 (1)

Conserved hypothetical protein 2206 (1)

Conserved hypothetical protein 2241, phage tail region protein (2)

Conserved hypothetical protein 2243 (2)

Conserved hypothetical protein 245 (1)

Conserved hypothetical protein 255 (1)

Conserved hypothetical protein 282 (1)

Conserved hypothetical protein 370 (1)

Conserved hypothetical protein 423 (2)

Conserved hypothetical protein 48 (2)

Conserved hypothetical protein 488 (1)

Conserved hypothetical protein 698 (1)

Conserved hypothetical protein 730 (1)

Conserved hypothetical protein 91 (1)

Conserved hypothetical protein 92 (1)

Conserved hypothetical protein 95 (2)

Conserved hypothetical protein CHP00159 (1)

Conserved hypothetical protein CHP02452 (1)

Conserved hypothetical protein CHP02464 (2)

Conserved hypothetical protein MG423 (3)

Conserved hypothetical protein Tiny_TM (1)

Conserved hypothetical protein, ArsC related (2)

Conserved hypothetical protein, CofD related (1)

Conserved hypothetical protein, F390 synthetase-related (1)

Conserved hypothetical protein, YfcH (1)

Conserved hypothetical protein, integral membrane YwzB (1)

CopG-like DNA-binding (1)

Copper amine oxidase, N-terminal (19)

Copper centre Cu(A) (3)

Copper ion binding protein (1)

Copper ion-binding (3)

Copper resistance D (1)

Copper resistance protein CopC, core (1)

Copper resistance protein CopC/internalin, immunoglobulin-like (1)

Copper-containing nitrite reductase, N-terminal (1)

Creatinase (4)

Crossover junction endodeoxyribonuclease RuvC (1)

Crotonase, core (10)

Cupin 1 (2)

Cupin 2, conserved barrel (11)

Cupin, RmlC-type (23)

Cupredoxin (11)

Curculin-like (mannose-binding) lectin (1)

CutC (1)

Cyclic nucleotide-binding (10)

Cyclic peptide transporter (1)

Cyclophilin-like (3)

Cys/Met metabolism, pyridoxal phosphate-dependent enzyme (8)

Cystathionine beta-synthase, core (16)

Cysteine desulphurase related, unknown function (1)

Cysteine desulphurases, SufS (1)

Cysteine synthase A (2)

Cysteine synthase K/M (2)

Cysteine synthase/cystathionine beta-synthase P-phosphate-binding site (3)

Cysteine-rich region, CCG (3)

Cysteinyl-tRNA synthetase, class Ia (1)

Cysteinyl-tRNA synthetase, class Ia, C-terminal (1)

Cysteinyl-tRNA synthetase, class Ia, DALR (1)

Cysteinyl-tRNA synthetase, class Ia, N-terminal (1)

Cytidine deaminase, homotetrameric (1)

Cytidylate kinase (1)

Cytidylate kinase region (1)

Cytidyltransferase-related (3)

Cytidylyltransferase (4)

Cytochrome C oxidase subunit II, transmembrane region (3)

Cytochrome C oxidase subunit IV prokaryotic (3)

Cytochrome P450 (2)

Cytochrome P450, B-class (1)

Cytochrome P450, E-class, group I (1)

Cytochrome aa3 quinol oxidase, subunit II (2)

Cytochrome b/b6, C-terminal (1)

Cytochrome b/b6, N-terminal (1)

Cytochrome b6 (1)

Cytochrome bd ubiquinol oxidase, subunit I (2)

Cytochrome bd ubiquinol oxidase, subunit II (1)

Cytochrome c assembly protein (2)

Cytochrome c biogenesis protein, transmembrane region (1)

Cytochrome c oxidase caa3 type, assembly factor CtaG (2)

Cytochrome c oxidase subunit II C-terminal (5)

Cytochrome c oxidase, subunit I (5)

Cytochrome c oxidase, subunit I bacterial type (1)

Cytochrome c oxidase, subunit II (1)

Cytochrome c oxidase, subunit III (4)

Cytochrome c region (6)

Cytochrome c, Bacillus subtilis c550-related (1)

Cytochrome c, class I (6)

Cytochrome c, monohaem (6)

Cytochrome o ubiquinol oxidase subunit II (2)

Cytochrome o ubiquinol oxidase subunit IV (2)

Cytochrome o ubiquinol oxidase, subunit III (1)

Cytochrome oxidase assembly (1)

Cytotoxic necrotizing factor-like, catalytic (1)

D-3-phosphoglycerate dehydrogenase (1)

D-3-phosphogylcerate Dehydrogenase (1)

D-alanine--D-alanine ligase (3)

D-alanine--D-alanine ligase, C-terminal (3)

D-alanine--D-alanine ligase, N-terminal (3)

D-alanine--D-alanine ligase/VANA/B/C (3)

D-amino acid aminotransferase (1)

D-arabinono-1,4-lactone oxidase (1)

D-hydantoinase (1)

D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (2)

D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region (2)

D-serine ammonia-lyase (1)

D-tyrosyl-tRNA(Tyr) deacylase (1)

D12 class N6 adenine-specific DNA methyltransferase (1)

DAHP synthetase I/KDSA (1)

DALR anticodon binding (2)

DEAD-like helicases, N-terminal (19)

DHHA2 (1)

DNA alkylation repair enzyme (1)

DNA breaking-rejoining enzyme, catalytic core (6)

DNA glycosylase (5)

DNA glycosylase, G/T mismatch (1)

DNA gyrase, subunit A (1)

DNA gyrase, subunit B (1)

DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel (2)

DNA helicase (recombination ), AddA type (1)

DNA helicase, ATP-dependent, Ku type (1)

DNA helicase, ATP-dependent, PcrA type (1)

DNA helicase, ATP-dependent, RecG (1)

DNA helicase, ATP-dependent, RecQ type (2)

DNA helicase, ATP-dependent, RecQ type, bacterial (1)

DNA helicase, DnaB type (3)

DNA helicase, DnaB-like, C-terminal (3)

DNA helicase, DnaB-like, N-terminal (3)

DNA helicase, Holliday junction RuvA type, C-terminal domain III (1)

DNA helicase, Holliday junction RuvA type, central, bacterial (1)

DNA helicase, Holliday junction RuvA type, domain I, bacterial (1)

DNA helicase, Holliday junction RuvB type (1)

DNA helicase, Holliday junction RuvB type, C-terminal (1)

DNA helicase, Holliday junction RuvB type, N-terminal (1)

DNA helicase, RecD/TraA type (1)

DNA helicase, UvrD-like, C terminal (4)

DNA helicase, UvrD/REP type (5)

DNA internalization-related competence protein ComEC/Rec2 (1)

DNA methylase N-4/N-6 (2)

DNA mismatch repair protein (1)

DNA mismatch repair protein MutS, C-terminal (3)

DNA mismatch repair protein MutS, N-terminal (1)

DNA mismatch repair protein, C-terminal (1)

DNA mismatch repair protein, N-terminal (1)

DNA mismatch repair, MutL/HexB/PMS1 (1)

DNA photolyase, FAD- binding N-terminal (1)

DNA photolyase, FAD-binding (1)

DNA photolyase, N-terminal (1)

DNA polymerase A (1)

DNA polymerase III clamp loader subunit, C-terminal (2)

DNA polymerase III, alpha subunit (1)

DNA polymerase III, alpha subunit, Gram-positive type (1)

DNA polymerase III, beta chain (1)

DNA polymerase III, delta (1)

DNA polymerase III, delta prime subunit (1)

DNA polymerase III, delta subunit (1)

DNA polymerase III, epsilon subunit (3)

DNA polymerase III, subunits gamma and tau (1)

DNA polymerase LigD, polymerase domain (1)

DNA polymerase, beta-like region (3)

DNA primase catalytic core, N-terminal (1)

DNA primase, DnaG (1)

DNA primase, small subunit (1)

DNA repair protein RadA (1)

DNA repair protein RadC (1)

DNA repair protein RecN (1)

DNA topoisomerase I, bacterial-type (1)

DNA topoisomerase III, bacterial-type (2)

DNA topoisomerase IV, subunit A, Gram-positive (1)

DNA topoisomerase, type IA (3)

DNA topoisomerase, type IA, DNA-binding (3)

DNA topoisomerase, type IA, bacterial/archaeal (2)

DNA topoisomerase, type IA, central (3)

DNA topoisomerase, type IA, central region, subdomain 1 (3)

DNA topoisomerase, type IA, central region, subdomain 3 (3)

DNA topoisomerase, type IA, domain 2 (3)

DNA topoisomerase, type IA, zn finger (3)

DNA topoisomerase, type IIA, central (4)

DNA topoisomerase, type IIA, subunit A or C-terminal (2)

DNA topoisomerase, type IIA, subunit A or C-terminal, alpha-beta (2)

DNA topoisomerase, type IIA, subunit A, alpha-helical (2)

DNA topoisomerase, type IIA, subunit B (2)

DNA topoisomerase, type IIA, subunit B or N-terminal (2)

DNA topoisomerase, type IIA, subunit B or N-terminal, alpha-beta (2)

DNA topoisomerase, type IIA, subunit B, C-terminal (2)

DNA topoisomerase, type IIA, subunit B, conserved region (2)

DNA topoisomerase, type IIA, subunit B, region 2 (2)

DNA-3-methyladenine glycosylase I (1)

DNA-binding protein Dps (2)

DNA-directed DNA polymerase (1)

DNA-directed DNA polymerase B (1)

DNA-directed RNA polymerase I, subunit 2 (1)

DNA-directed RNA polymerase delta subunit (1)

DNA-directed RNA polymerase, alpha subunit (1)

DNA-directed RNA polymerase, beta subunit (1)

DNA-directed RNA polymerase, subunit beta-prime (1)

DNA/RNA helicase, ATP-dependent, DEAH-box type (1)

DNA/RNA helicase, C-terminal (19)

DNA/RNA helicase, DEAD/DEAH box type, N-terminal (11)

DNA/pantothenate metabolism flavoprotein, C-terminal (1)

DRTGG (1)

DSBA oxidoreductase (1)

Dak phosphatase (1)

DbpA, RNA-binding (1)

DegT/DnrJ/EryC1/StrS aminotransferase (2)

DegV (2)

Dehydrogenase, E1 component (4)

Dehydrogenase, multihelical (14)

Dehydroquinase, class II (1)

Delta 1-pyrroline-5-carboxylate reductase (3)

Delta crystallin (6)

Delta endotoxin, C-terminal (1)

Delta endotoxin, N-terminal (1)

Delta-lactam-biosynthetic de-N-acetylase (1)

DeoxyUTP pyrophosphatase (1)

DeoxyUTP pyrophosphatase subfamily 1 (1)

Deoxynucleoside kinase (2)

Deoxyribodipyrimidine photolyase, class 1 (1)

Deoxyribonuclease/rho motif-related TRAM (6)

Deoxyribose-phosphate aldolase (1)

Deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase (1)

Deoxyxylulose-5-phosphate synthase (1)

Dephospho-CoA kinase (1)

Dethiobiotin synthase (1)

Di-trans-poly-cis-decaprenylcistransferase (1)

Diacylglycerol kinase, catalytic region (2)

Diaminopimelate decarboxylase (1)

Diaminopimelate epimerase (2)

Diaminopropionate ammonia-lyase (1)

Dihydrodipicolinate reductase (1)

Dihydrodipicolinate reductase, bacterial and plant (1)

Dihydrodipicolinate synthase subfamily (2)

Dihydrodipicolinate synthetase (2)

Dihydrofolate reductase (1)

Dihydrofolate reductase region (1)

Dihydrolipoamide dehydrogenase (5)

Dihydroneopterin aldolase (1)

Dihydroneopterin aldolase family (1)

Dihydroorotase (2)

Dihydroorotase multifunctional complex type (1)

Dihydroorotase region (2)

Dihydroorotate dehydrogenase, class 1, core (1)

Dihydroorotate dehydrogenase, class 2 (1)

Dihydroorotate dehydrogenase, classes 1 and 2 (1)

Dihydroorotate dehydrogenase, core (3)

Dihydropteroate synthase (1)

Dihydropteroate synthase, DHPS (2)

Dihydropteroate synthase-like (3)

Dihydrouridine synthase TIM-barrel protein nifR3 (1)

Dihydrouridine synthase, DuS (1)

Dihydroxy-acid and 6-phosphogluconate dehydratase (1)

Dihydroxy-acid dehydratase (1)

Dimeric alpha-beta barrel (15)

DinB (5)

Dipicolinic acid synthetase, subunit A (1)

Dipicolinic acid synthetase, subunit B (1)

Disulphide bond formation protein DsbB (1)

Disulphide oxidoreductase C BdbC (1)

DivIVA (1)