Clone Information : G10-001-217 / BB1FE1L10024F04
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| Cell envelope and cellular processes |
| Cell wall |
| Transformation/competence |
| Transport/binding proteins and lipoproteins |
| Sensors (signal transduction) |
| Membrane bioenergetics (electron transport chain and ATP synthase) |
| Mobility and chemotaxis |
| Protein secretion |
| Cell division |
| Sporulation |
| Germination |
| Intermediary metabolism |
| Metabolism of carbohydrates and related molecules |
| Specific pathways |
| Main glycolytic pathways |
| TCA cycle |
| Metabolism of amino acids and related molecules |
| Metabolism of nucleotides and nucleic acids |
| Metabolism of lipids |
| Metabolism of coenzymes and prosthetic groups |
| Metabolism of phosphate |
| Metabolism of sulfur |
| Information pathways |
| DNA replication |
| DNA restriction/modification and repair |
| DNA recombination |
| DNA packaging and segregation |
| RNA synthesis |
| Initiation |
| Regulation |
| Elongation |
| Termination |
| RNA modification |
| Protein synthesis |
| Ribosomal proteins |
| Aminoacyl-tRNA synthetases |
| Initiation |
| Elongation |
| Termination |
| Protein modification |
| Protein folding |
| Other functions |
| Adaptation to atypical conditions |
| Detoxification |
| Antibiotic production |
| Phage-related functions |
| Transposon and IS |
| Miscellaneous |
| Similar to unknown proteins |
| Homologous to unknown proteins |
| Partially similar to unknown proteins |
| No similarity |
Clone information
| NBRC No. | G10-001-217 |
|---|---|
| clone name | BB1FE1L10024F04 |
| organism | Brevibacillus brevis NBRC 100599 |
| replicon | chromosome |
| start position | 5,842,375 |
| stop position | 5,886,637 |
| vector | pCC1FOS |
| cloning site | Eco72 I |
| resistance | Chloramphenicol |
List of genes covered by this clone (41 CDSs, 0 tRNAs, 0 rRNAs)
CDS
| ID | start | stop | direction | length(bp) | annotation |
|---|---|---|---|---|---|
| BBR47_55290 | 5,843,352 | 5,844,599 | + | 1,248 | conserved hypothetical membrane protein |
| BBR47_55300 | 5,844,678 | 5,845,325 | + | 648 | hypothetical protein |
| BBR47_55310 | 5,848,028 | 5,845,380 | - | 2,649 | hypothetical protein |
| BBR47_55320 | 5,849,260 | 5,848,103 | - | 1,158 | conserved hypothetical protein |
| BBR47_55330 | 5,849,468 | 5,850,274 | + | 807 | putative formamidopyrimidine-DNA glycosylase |
| BBR47_55340 | 5,851,195 | 5,850,287 | - | 909 | conserved hypothetical protein |
| BBR47_55350 | 5,851,338 | 5,851,748 | + | 411 | hypothetical protein |
| BBR47_55360 | 5,851,783 | 5,852,424 | + | 642 | thiamine pyrophosphokinase |
| BBR47_55370 | 5,853,193 | 5,852,504 | - | 690 | uracil-DNA glycosylase |
| BBR47_55380 | 5,853,417 | 5,853,932 | + | 516 | hypothetical protein |
| BBR47_55390 | 5,854,136 | 5,855,029 | + | 894 | conserved hypothetical protein |
| BBR47_55400 | 5,855,106 | 5,855,429 | + | 324 | conserved hypothetical protein |
| BBR47_55410 | 5,856,948 | 5,855,668 | - | 1,281 | probable transcriptional regulator |
| BBR47_55420 | 5,858,354 | 5,857,146 | - | 1,209 | probable methionine gamma-lyase |
| BBR47_55430 | 5,860,295 | 5,858,574 | - | 1,722 | putative dehydrogenase |
| BBR47_55440 | 5,861,060 | 5,860,311 | - | 750 | putative dehydrogenase |
| BBR47_55450 | 5,861,208 | 5,861,903 | + | 696 | hypothetical protein |
| BBR47_55460 | 5,862,791 | 5,861,943 | - | 849 | conserved hypothetical protein |
| BBR47_55470 | 5,863,276 | 5,863,704 | + | 429 | conserved hypothetical protein |
| BBR47_55480 | 5,865,108 | 5,863,774 | - | 1,335 | putrescine importer |
| BBR47_55490 | 5,866,897 | 5,865,230 | - | 1,668 | glutaminyl-tRNA synthetase |
| BBR47_55500 | 5,867,594 | 5,866,977 | - | 618 | hypothetical protein |
| BBR47_55510 | 5,867,810 | 5,867,935 | + | 126 | hypothetical protein |
| BBR47_55520 | 5,868,105 | 5,869,823 | + | 1,719 | putative gamma-glutamyltranspeptidase |
| BBR47_55530 | 5,869,904 | 5,871,892 | + | 1,989 | probable methyl-accepting chemotaxis protein |
| BBR47_55540 | 5,872,674 | 5,871,955 | - | 720 | glycerophosphoryl diester phosphodiesterase |
| BBR47_55550 | 5,874,033 | 5,872,705 | - | 1,329 | glycerol-3-phosphate-binding periplasmic protein |
| BBR47_55560 | 5,874,893 | 5,874,066 | - | 828 | SN-glycerol-3-phosphate transport system permease protein |
| BBR47_55570 | 5,875,876 | 5,874,920 | - | 957 | SN-glycerol-3-phosphate transport system permease protein |
| BBR47_55580 | 5,876,943 | 5,875,876 | - | 1,068 | SN-glycerol-3-phosphate transport ATP-binding protein |
| BBR47_55590 | 5,877,612 | 5,876,950 | - | 663 | pyrophosphatase |
| BBR47_55600 | 5,878,189 | 5,877,590 | - | 600 | probable glycerol uptake operon antiterminator regulatory protein |
| BBR47_55610 | 5,879,825 | 5,878,638 | - | 1,188 | putative transporter |
| BBR47_55620 | 5,880,920 | 5,879,892 | - | 1,029 | conserved hypothetical protein |
| BBR47_55630 | 5,881,286 | 5,881,005 | - | 282 | probable transcriptional regulator |
| BBR47_55640 | 5,881,498 | 5,881,851 | + | 354 | hypothetical protein |
| BBR47_55650 | 5,881,854 | 5,882,297 | + | 444 | hypothetical membrane protein |
| BBR47_55660 | 5,883,080 | 5,882,358 | - | 723 | putative purine nucleoside phosphorylase |
| BBR47_55670 | 5,883,720 | 5,883,082 | - | 639 | conserved hypothetical protein |
| BBR47_55680 | 5,884,702 | 5,883,788 | - | 915 | ABC transporter permease protein |
| BBR47_55690 | 5,885,759 | 5,884,689 | - | 1,071 | ABC transporter permease protein |
Distribution of Our Microbial Genomic DNA clones
We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.
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