Please make javascript effective. Clone Information : G18-001-122 / SP1FE13L00046F02
Genomic map
Cell envelope and cellular processes cell wall / transformation & competence transport / binding protein & lipoprotein sensor membrane bioenergetics mobility and chemotaxis secretion cell division sporulation Intermedialy metabolism metabolism of carbohydrates and related molecules specific pathways main glycolytic pathways TCA cycle metabolism of amino acids and related molecules metabolism of nucleotides and nucleic acids metabolism of lipids metabolism of coenzymes metabolism of phosphate metabolism of sulfur Information pathways DNA replication DNA modification & repair DNA recombination DNA packaging & segregation RNA synthesis RNA initiation regulation RNA elongation termination RNA modification protein synthesis ribosomal proteins aminoacyl-tRNA transferases initiation elongation termination protein modification protein folding Other functions adaptation of atypical condition detoxification antibiotic production phage related transposon miscellaneous similar to unknown proteins no similarity
Clone information
NBRC No.
G18-001-122
clone name
SP1FE13L00046F02
organism
Sphingobium japonicum UT26S (= NBRC 101211 )
replicon
chromosome1
start position
2,762,780
stop position
2,799,331
vector
pCC1FOS
cloning site
Eco72 I
resistance
Chloramphenicol
List of genes covered by this clone (34 CDSs, 0 tRNAs, 0 rRNAs)
CDS
ID
start
stop
direction
length(bp)
annotation
SJA_C1-27610 2,764,146
2,764,754
+
609
hypothetical protein
SJA_C1-27620 2,765,046
2,764,759
-
288
pterin-4-alpha-carbinolamine dehydratase
SJA_C1-27630 2,765,133
2,765,558
+
426
conserved hypothetical protein
SJA_C1-27640 2,765,555
2,766,163
+
609
heme exporter ATP-binding protein CcmA
SJA_C1-27650 2,766,160
2,766,807
+
648
heme exporter membrane protein CcmB
SJA_C1-27660 2,767,071
2,767,967
+
897
putative permease
SJA_C1-27670 2,768,259
2,767,978
-
282
chorismate mutase
SJA_C1-27680 2,768,403
2,769,443
+
1,041
octaprenyl-diphosphate synthase
SJA_C1-27690 2,769,568
2,770,347
+
780
putative permease
SJA_C1-27700 2,770,368
2,772,845
+
2,478
ATP-dependent helicase HrpB
SJA_C1-27710 2,772,904
2,773,182
+
279
putative oxidoreductase
SJA_C1-27720 2,773,881
2,773,327
-
555
conserved hypothetical protein
SJA_C1-27730 2,773,963
2,774,205
+
243
acyl carrier protein
SJA_C1-27740 2,774,355
2,775,572
+
1,218
8-amino-7-oxononanoate synthase
SJA_C1-27750 2,775,695
2,777,686
+
1,992
signal transduction histidine kinase
SJA_C1-27760 2,778,524
2,777,643
-
882
hypothetical protein
SJA_C1-27770 2,778,780
2,779,553
+
774
hypothetical protein
SJA_C1-27780 2,780,232
2,779,585
-
648
conserved hypothetical protein
SJA_C1-27790 2,781,857
2,780,229
-
1,629
glycine dehydrogenase subunit 2
SJA_C1-27800 2,783,313
2,781,955
-
1,359
glycine dehydrogenase subunit 1
SJA_C1-27810 2,783,809
2,783,438
-
372
glycine cleavage system H protein
SJA_C1-27820 2,785,040
2,783,871
-
1,170
aminomethyltransferase
SJA_C1-27830 2,786,619
2,785,432
-
1,188
dGTPase
SJA_C1-27840 2,788,382
2,786,658
-
1,725
conserved hypothetical protein
SJA_C1-27850 2,790,029
2,788,560
-
1,470
cell division protein FtsZ
SJA_C1-27860 2,791,427
2,790,141
-
1,287
cell division protein FtsA
SJA_C1-27870 2,792,381
2,791,434
-
948
cell division protein FtsQ
SJA_C1-27880 2,793,339
2,792,374
-
966
D-alanine-D-alanine ligase
SJA_C1-27890 2,794,283
2,793,336
-
948
UDP-N-acetylmuramate dehydrogenase
SJA_C1-27900 2,794,477
2,794,280
-
198
hypothetical protein
SJA_C1-27910 2,795,898
2,794,477
-
1,422
UDP-N-acetylmuramate-alanine ligase
SJA_C1-27920 2,796,041
2,795,895
-
147
hypothetical protein
SJA_C1-27930 2,797,153
2,796,038
-
1,116
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
SJA_C1-27940 2,798,403
2,797,201
-
1,203
cell division protein FtsW
Distribution of Our Microbial Genomic DNA clones
We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at
http://www.nbrc.nite.go.jp/e/mdna-e.html .
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List of genes covered by this clone (34 CDSs, 0 tRNAs, 0 rRNAs)