Please make javascript effective. Clone Information : G18-001-155 / SP1FE13L00045F09
Genomic map
Cell envelope and cellular processes cell wall / transformation & competence transport / binding protein & lipoprotein sensor membrane bioenergetics mobility and chemotaxis secretion cell division sporulation Intermedialy metabolism metabolism of carbohydrates and related molecules specific pathways main glycolytic pathways TCA cycle metabolism of amino acids and related molecules metabolism of nucleotides and nucleic acids metabolism of lipids metabolism of coenzymes metabolism of phosphate metabolism of sulfur Information pathways DNA replication DNA modification & repair DNA recombination DNA packaging & segregation RNA synthesis RNA initiation regulation RNA elongation termination RNA modification protein synthesis ribosomal proteins aminoacyl-tRNA transferases initiation elongation termination protein modification protein folding Other functions adaptation of atypical condition detoxification antibiotic production phage related transposon miscellaneous similar to unknown proteins no similarity
Clone information
NBRC No.
G18-001-155
clone name
SP1FE13L00045F09
organism
Sphingobium japonicum UT26S (= NBRC 101211 )
replicon
chromosome1
start position
3,499,710
stop position
18,843
vector
pCC1FOS
cloning site
Eco72 I
resistance
Chloramphenicol
List of genes covered by this clone (31 CDSs, 0 tRNAs, 0 rRNAs)
CDS
ID
start
stop
direction
length(bp)
annotation
SJA_C1-35180 3,502,042
3,500,720
-
1,323
putative nucleoside permease
SJA_C1-35190 3,504,773
3,502,443
-
2,331
DNA segregation ATPase FtsK
SJA_C1-35200 3,505,486
3,504,995
-
492
diamine N-acetyltransferase
SJA_C1-35210 3,506,405
3,505,497
-
909
putative permease
SJA_C1-35220 3,507,582
3,506,422
-
1,161
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
SJA_C1-35230 3,509,065
3,507,761
-
1,305
long-chain fatty acid transport protein
SJA_C1-35240 3,510,872
3,509,463
-
1,410
phosphomannomutase
SJA_C1-35250 3,511,329
3,510,892
-
438
DnaJ-class molecular chaperone
SJA_C1-35260 3,512,135
3,511,329
-
807
ParA-like protein
SJA_C1-35270 3,512,245
3,513,090
+
846
pantoate-beta-alanine ligase
SJA_C1-35280 3,513,624
3,513,184
-
441
putative membrane protein
SJA_C1-35290 3,514,688
3,513,627
-
1,062
uroporphyrinogen decarboxylase
SJA_C1-00010 154
975
+
822
conserved hypothetical protein
SJA_C1-00020 980
1,573
+
594
Maf-like protein
SJA_C1-00030 1,570
2,391
+
822
shikimate 5-dehydrogenase
SJA_C1-00040 2,411
3,004
+
594
dephospho-CoA kinase
SJA_C1-00050 3,036
3,728
+
693
DNA polymerase III epsilon subunit
SJA_C1-00060 3,824
4,420
+
597
sigma 54
SJA_C1-00070 4,466
5,008
+
543
PTS system nitrogen regulatory IIA component
SJA_C1-00080 4,968
5,477
+
510
conserved hypothetical protein
SJA_C1-00090 5,506
5,817
+
312
conserved hypothetical protein
SJA_C1-00100 5,995
6,642
+
648
N-acetylmuramoyl-L-alanine amidase
SJA_C1-00110 6,743
7,237
+
495
conserved hypothetical protein
SJA_C1-00120 7,836
7,273
-
564
thiamine monophosphate synthase
SJA_C1-00130 7,854
8,600
+
747
conserved hypothetical protein
SJA_C1-00140 11,343
8,578
-
2,766
TonB-dependent receptor-like protein
SJA_C1-00150 12,193
11,534
-
660
putative ICC-like phosphoesterase
SJA_C1-00160 12,247
13,095
+
849
putative sulfurtransferase
SJA_C1-00170 15,993
13,582
-
2,412
Lhr-like helicase
SJA_C1-00180 16,264
17,601
+
1,338
cystathionine beta-lyase/cystathionine gamma-synthase
SJA_C1-00190 17,598
18,527
+
930
putative dehydrogenase
Distribution of Our Microbial Genomic DNA clones
We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at
http://www.nbrc.nite.go.jp/e/mdna-e.html .
open/close all
List of genes covered by this clone (31 CDSs, 0 tRNAs, 0 rRNAs)