Clone Information : G20-001-148 / KS1E11L00035C07
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| Cell envelope and cellular processes |
| cell wall / transformation & competence |
| transport / binding protein & lipoprotein |
| sensor |
| membrane bioenergetics |
| mobility and chemotaxis |
| secretion |
| cell division |
| sporulation |
| Intermediary metabolism |
| metabolism of carbohydrates and related molecules |
| specific pathways |
| main glycolytic pathways |
| TCA cycle |
| metabolism of amino acids and related molecules |
| metabolism of nucleotides and nucleic acids |
| metabolism of lipids |
| metabolism of coenzymes |
| metabolism of phosphate |
| metabolism of sulfur |
| Information pathways |
| DNA replication |
| DNA modification & repair |
| DNA recombination |
| DNA packaging & segregation |
| RNA synthesis |
| RNA initiation |
| regulation |
| RNA elongation |
| termination |
| RNA modification |
| protein synthesis |
| ribosomal proteins |
| aminoacyl-tRNA transferases |
| initiation |
| elongation |
| termination |
| protein modification |
| protein folding |
| Other functions |
| adaptation of atypical condition |
| detoxification |
| antibiotic production |
| phage related |
| transposon |
| miscellaneous |
| similar to unknown proteins |
| no similarity |
Clone information
| NBRC No. | G20-001-148 |
|---|---|
| clone name | KS1E11L00035C07 |
| organism | Kitasatospora setae NBRC 14216T |
| replicon | chromosome |
| start position | 3,663,768 |
| stop position | 3,701,828 |
| vector | pCC1FOS |
| cloning site | Eco72 I |
| resistance | Chloramphenicol |
List of genes covered by this clone (39 CDSs, 0 tRNAs, 0 rRNAs)
CDS
| ID | start | stop | direction | length(bp) | annotation |
|---|---|---|---|---|---|
| KSE_32620 | 3,665,621 | 3,664,536 | - | 1,086 | hypothetical protein |
| KSE_32630 | 3,666,672 | 3,665,674 | - | 999 | putative diaminopimelate epimerase |
| KSE_32640 | 3,667,675 | 3,666,794 | - | 882 | hypothetical protein |
| KSE_32650 | 3,668,291 | 3,668,055 | - | 237 | hypothetical protein |
| KSE_32660 | 3,669,160 | 3,668,288 | - | 873 | putative transcriptional regulator |
| KSE_32670 | 3,669,430 | 3,669,909 | + | 480 | hypothetical protein |
| KSE_32680 | 3,669,955 | 3,671,259 | + | 1,305 | putative UDP-N-acetylglucosamine 1-carboxyvinyltransferase |
| KSE_32690 | 3,671,256 | 3,672,482 | + | 1,227 | putative phosphodiesterase |
| KSE_32700 | 3,672,479 | 3,673,018 | + | 540 | putative deoxycytidine triphosphate deaminase |
| KSE_32710 | 3,673,015 | 3,673,551 | + | 537 | putative hydrolase |
| KSE_32720 | 3,673,548 | 3,674,663 | + | 1,116 | putative glycosyltransferase |
| KSE_32730 | 3,674,748 | 3,675,791 | + | 1,044 | putative peptidase S12 family protein |
| KSE_32740 | 3,675,983 | 3,676,189 | + | 207 | hypothetical protein |
| KSE_32750 | 3,677,311 | 3,676,352 | - | 960 | hypothetical protein |
| KSE_32760 | 3,677,853 | 3,677,527 | - | 327 | hypothetical protein |
| KSE_32770 | 3,679,009 | 3,678,095 | - | 915 | hypothetical protein |
| KSE_32780 | 3,680,835 | 3,679,114 | - | 1,722 | hypothetical protein |
| KSE_32790 | 3,681,275 | 3,680,832 | - | 444 | hypothetical protein |
| KSE_32800 | 3,682,750 | 3,681,791 | - | 960 | hypothetical protein |
| KSE_32810 | 3,682,814 | 3,683,371 | + | 558 | hypothetical protein |
| KSE_32820 | 3,683,785 | 3,685,743 | + | 1,959 | putative recombinase |
| KSE_32830 | 3,685,876 | 3,685,670 | - | 207 | hypothetical protein |
| KSE_32840 | 3,686,513 | 3,685,920 | - | 594 | hypothetical protein |
| KSE_32850 | 3,687,307 | 3,686,516 | - | 792 | putative phosphopantetheinyl transferase |
| KSE_32860 | 3,688,226 | 3,686,988 | - | 1,239 | hypothetical protein |
| KSE_32865 | 3,688,207 | 3,688,677 | + | 471 | hypothetical protein |
| KSE_32870 | 3,689,167 | 3,688,751 | - | 417 | hypothetical protein |
| KSE_32880 | 3,690,195 | 3,689,338 | - | 858 | putative protease HtpX |
| KSE_32890 | 3,691,863 | 3,690,301 | - | 1,563 | putative NADH-quinone oxidoreductase subunit N |
| KSE_32900 | 3,693,389 | 3,691,863 | - | 1,527 | putative NADH-quinone oxidoreductase subunit M |
| KSE_32910 | 3,695,577 | 3,693,571 | - | 2,007 | putative NADH-quinone oxidoreductase subunit L |
| KSE_32920 | 3,695,930 | 3,695,574 | - | 357 | putative NADH-quinone oxidoreductase subunit K |
| KSE_32930 | 3,696,642 | 3,695,932 | - | 711 | putative NADH-quinone oxidoreductase subunit J |
| KSE_32940 | 3,697,217 | 3,696,639 | - | 579 | putative NADH-quinone oxidoreductase subunit I |
| KSE_32950 | 3,698,176 | 3,697,217 | - | 960 | putative NADH-quinone oxidoreductase subunit H |
| KSE_32960 | 3,699,276 | 3,698,173 | - | 1,104 | putative NADH dehydrogenase |
| KSE_32970 | 3,699,902 | 3,699,273 | - | 630 | putative NADH-quinone oxidoreductase subunit B |
| KSE_32980 | 3,700,300 | 3,699,893 | - | 408 | putative NADH-quinone oxidoreductase subunit A |
| KSE_32990 | 3,700,559 | 3,701,764 | + | 1,206 | putative two-component system sensor kinase |
Distribution of Our Microbial Genomic DNA clones
We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.
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