CDS Information : ACMV_06390

Display	1000bp 10000bp 100000bp Clone

Acidiphilium multivorum AIU301 (= NBRC 100883) chromosome	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Acidiphilium multivorum AIU301 (= NBRC 100883)
Replicon	chromosome
Start / Stop / Direction	724,118 / 722,889 / -
Location	complement(722889..724118)
Type	CDS
Length	1,230 bp (409 aa)

Product	isocitrate dehydrogenase Synonym: oxalosuccinate decarboxylase
Gene name	icd
Functional category	Metabolism - Carbohydrate Metabolism
EC number	1.1.1.42
Note
KEGG pathway	map:00020 KO:K00031 map:00480 KO:K00031 map:00720 KO:K00031 map:01061 KO:K00031 map:01062 KO:K00031 map:01063 KO:K00031 map:01064 KO:K00031 map:01065 KO:K00031 map:01066 KO:K00031 map:01070 KO:K00031 map:01100 KO:K00031 map:04146 KO:K00031
Sequence feature
References	Family/Domain:IPR001804 Uniprot:P21954 Pubmed:1989987

BLASTP Database:UniProtKB:2010_04 show BLAST table	1 E=0 A5FW07_ACICJ Isocitrate dehydrogenase (NADP) Alignment 2 E=0 C7JDY1_ACEP3 Isocitrate dehydrogenase Alignment 3 E=0 C7L883_ACEPA Isocitrate dehydrogenase Alignment 4 E=0 C7KYF9_ACEPA Isocitrate dehydrogenase Alignment 5 E=0 C7KP44_ACEPA Isocitrate dehydrogenase Alignment
HAMAP	No significant hit
InterPro Database:interpro:26.0	IPR001804 Isocitrate/isopropylmalate dehydrogenase (Family) PF00180   Iso_dh G3DSA:3.40.718.10   IDH_IMDH PS00470   IDH_IMDH IPR004790 Isocitrate dehydrogenase NADP-dependent, eukaryotic (Family) PIRSF000108   IDH_NADP TIGR00127   nadp_idh_euk IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site (Conserved_site) PS00470   IDH_IMDH IPR024084 Isopropylmalate dehydrogenase-like domain (Domain) PF00180   Iso_dh G3DSA:3.40.718.10   IDH_IMDH
SignalP	No significant hit
TMHMM	No significant hit
SOSUI	No significant hit

size of protein	409 amino acids
molecular mass	45,768.28 Da
pI	6.13
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 9 (37aa) 6.4 (26aa) 7.3 (30aa) 7.1 (29aa) 4.2 (17aa) 1.7 (7aa) 4.6 (19aa) 2.7 (11aa) 7.3 (30aa) 4.4 (18aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 6.6 (27aa) 1 (4aa) 3.4 (14aa) 2.4 (10aa) 3.9 (16aa) 7.3 (30aa) 2 (8aa) 4.9 (20aa) 7.6 (31aa) 6.1 (25aa)

>ACMV_06390 isocitrate dehydrogenase
ATGGCCAAGATCAAGGTTAAGAACCCGATCGTCGAGATGGACGGCGACGAGATGACCCGG
ATCATCTGGGGGTTCATCAAGGACAAGCTGATCCTGCCCTATCTCGATGTCGACCTGAAA
TACTACGATCTCGGGATCGAGAACCGCGATGCCACGGACGACAAGGTGACGGTCGACTCG
GCGCTGGCAACGAAGGAATACGGCGTCGCGGTGAAGTGCGCGACGATCACGCCGGACGAG
GCGCGCGTCAAGGAATTCAATCTCAAGCAGATGTGGCGCAGCCCGAACGGGACGATCCGC
AACATCCTCGACGGCACGATCTTCCGCGAGCCGATCATCTGCGCGAACGTGCCGCGCCTG
GTGCCGCACTGGTCGCAGCCGATCGTGATCGGCCGCCATGCCTATGGCGACATCTACCGC
GCCGCCGAAACCAAGATCCCCGGCCCGGGCAAGGTGCAGCTCTCCTACATCCCGGCCGAT
GGCAGCAAGCCGCTGATCCTCGACGTGCACGATTTCAAGGGCCCCGGCGTCGCGCTCGGC
ATCCACAACACCAAGGCCTCGATCGAGGGCTTCGCGCGGGCGAGCTTCAATTACGGGCTG
GCGCGGAACTATCCGGTCTATCTCTCGACCAAGAACACCATCCTCAAGGCCTATGACGGC
ATGTTCAAGGACGTGTTCCAGGAGATCTTCGACGCCGAGTTCAAGGCGGAGTTCGACAAG
CGCGGCCTGACCTACGAGCACCGGCTGATCGACGACATGGTCGCCTCGGCGCTGAAGTGG
AACGGCGGCTATATCTGGGCCTGCAAGAACTATGACGGCGATGTGGAGAGCGACATCGTC
GCGCAGGGCTTCGGCAGCCTCGGGCTGATGACCTCGGTGCTGATGAGCCCGGATGGCAAG
ACGGTGGAGAGCGAGGCGGCGCACGGCACCGTGACCCGCCACTATCGCGAGCACCAGAAG
GGCCGCCCGACCTCGACCAACCCGATCGCCTCGATCTTCGCCTGGACCCGCGGCCTCGCC
TATCGCGGCAAGTTCGACGAGACGCCCGAGGTGACCGAGTTCGCCGAGACGCTGGAGCGC
GTCTGCGTCGAGACGGTGGAAAGCGGGTTCATGACCAAGGATCTCGCGCTGCTGATCTCG
AAGGACCAGCCCTGGATGACCACGCAGGACTTCCTCGCCAAGCTCGACGAGAACCTGCAG
GCGGCGATGGCGAAGCGCCAGGCCGCGTGA


>ACMV_06390 isocitrate dehydrogenase
MAKIKVKNPIVEMDGDEMTRIIWGFIKDKLILPYLDVDLKYYDLGIENRDATDDKVTVDS
ALATKEYGVAVKCATITPDEARVKEFNLKQMWRSPNGTIRNILDGTIFREPIICANVPRL
VPHWSQPIVIGRHAYGDIYRAAETKIPGPGKVQLSYIPADGSKPLILDVHDFKGPGVALG
IHNTKASIEGFARASFNYGLARNYPVYLSTKNTILKAYDGMFKDVFQEIFDAEFKAEFDK
RGLTYEHRLIDDMVASALKWNGGYIWACKNYDGDVESDIVAQGFGSLGLMTSVLMSPDGK
TVESEAAHGTVTRHYREHQKGRPTSTNPIASIFAWTRGLAYRGKFDETPEVTEFAETLER
VCVETVESGFMTKDLALLISKDQPWMTTQDFLAKLDENLQAAMAKRQAA

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.