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CDS Information : ACMV_08240

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close this sectionGenomic map

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Acidiphilium multivorum AIU301 (= NBRC 100883) chromosome

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Overview 
Genome

close this sectionLocation

Organism Acidiphilium multivorum AIU301 (= NBRC 100883)
Replicon chromosome
Start / Stop / Direction 933,057 / 931,792 / -
Location complement(931792..933057)
Type CDS
Length 1,266 bp (421 aa)

close this sectionAnnotation

Product ribulose bisphosphate carboxylase
Gene name rbcL
Functional category Metabolism
- Carbohydrate Metabolism
EC number 4.1.1.39
Note
KEGG pathway map:00630 KO:K01601
map:00710 KO:K01601
Sequence feature
References Family/Domain:IPR000685
Uniprot:Q58632 Pubmed:12730164

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=0A5FXF1_ACICJRibulose 1,5-bisphosphate carboxylase large subunitAlignment
2E=1e-175B8IMG3_METNORibulose-1,5-bisphosphate carboxylase/oxygenase large subunitAlignment
3E=1e-166B0U7K1_METS4Ribulose-bisphosphate carboxylaseAlignment
4E=1e-150Q12HD2_POLSJRibulose 1,5-bisphosphate carboxylase large subunitAlignment
5E=1e-149Q1YDM7_MOBASRibulose-1,5-bisphosphate carboxylase/oxygenase large subunitAlignment
HAMAP No significant hit
InterPro
Database:interpro:26.0
IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal (Domain)
 [135-418]  3.1e-93 G3DSA:3.20.20.110
G3DSA:3.20.20.110   no description
 [136-418]  1.7e-87 SSF51649
SSF51649   RuBisCo, C-terminal domain
 [144-418]  7.1e-36 PF00016
PF00016   RuBisCO_large
 [182-190]  PS00157
PS00157   RUBISCO_LARGE
IPR000685 Ribulose bisphosphate carboxylase, large chain (Family)
 [182-190]  PS00157
PS00157   RUBISCO_LARGE
 [4-134]  1.1e-22 G3DSA:3.30.70.150
G3DSA:3.30.70.150   no description
 [135-418]  3.1e-93 G3DSA:3.20.20.110
G3DSA:3.20.20.110   no description
 [144-418]  7.1e-36 PF00016
PF00016   RuBisCO_large
IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal (Domain)
 [4-135]  1.8e-26 SSF54966
SSF54966   RuBisCO, large subunit, small (N-terminal) domain
 [4-134]  1.1e-22 G3DSA:3.30.70.150
G3DSA:3.30.70.150   no description
IPR020878 Ribulose bisphosphate carboxylase, large chain, active site (Active_site)
 [182-190]  PS00157
PS00157   RUBISCO_LARGE
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 421 amino acids
molecular mass 43,897.99 Da
pI 6.96
aa composition
AlaValLeuIlePheTrpProMetGlySer
16.6
(70aa)
7.8
(33aa)
9.3
(39aa)
3.1
(13aa)
3.3
(14aa)
1.4
(6aa)
6.7
(28aa)
2.6
(11aa)
10.7
(45aa)
6.2
(26aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
4
(17aa)
1
(4aa)
2.6
(11aa)
1.7
(7aa)
1
(4aa)
1.9
(8aa)
2.9
(12aa)
7.4
(31aa)
5
(21aa)
5
(21aa)

open this sectionSequence