CDS Information : ACMV_08240

Display	1000bp 10000bp 100000bp Clone

Acidiphilium multivorum AIU301 (= NBRC 100883) chromosome	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Acidiphilium multivorum AIU301 (= NBRC 100883)
Replicon	chromosome
Start / Stop / Direction	933,057 / 931,792 / -
Location	complement(931792..933057)
Type	CDS
Length	1,266 bp (421 aa)

Product	ribulose bisphosphate carboxylase
Gene name	rbcL
Functional category	Metabolism - Carbohydrate Metabolism
EC number	4.1.1.39
Note
KEGG pathway	map:00630 KO:K01601 map:00710 KO:K01601
Sequence feature
References	Family/Domain:IPR000685 Uniprot:Q58632 Pubmed:12730164

BLASTP Database:UniProtKB:2010_04 show BLAST table	1 E=0 A5FXF1_ACICJ Ribulose 1,5-bisphosphate carboxylase large subunit Alignment 2 E=1e-175 B8IMG3_METNO Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit Alignment 3 E=1e-166 B0U7K1_METS4 Ribulose-bisphosphate carboxylase Alignment 4 E=1e-150 Q12HD2_POLSJ Ribulose 1,5-bisphosphate carboxylase large subunit Alignment 5 E=1e-149 Q1YDM7_MOBAS Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit Alignment
HAMAP	No significant hit
InterPro Database:interpro:26.0	IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal (Domain) G3DSA:3.20.20.110   no description SSF51649   RuBisCo, C-terminal domain PF00016   RuBisCO_large PS00157   RUBISCO_LARGE IPR000685 Ribulose bisphosphate carboxylase, large chain (Family) PS00157   RUBISCO_LARGE G3DSA:3.30.70.150   no description G3DSA:3.20.20.110   no description PF00016   RuBisCO_large IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal (Domain) SSF54966   RuBisCO, large subunit, small (N-terminal) domain G3DSA:3.30.70.150   no description IPR020878 Ribulose bisphosphate carboxylase, large chain, active site (Active_site) PS00157   RUBISCO_LARGE
SignalP	No significant hit
TMHMM	No significant hit
SOSUI	No significant hit

size of protein	421 amino acids
molecular mass	43,897.99 Da
pI	6.96
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 16.6 (70aa) 7.8 (33aa) 9.3 (39aa) 3.1 (13aa) 3.3 (14aa) 1.4 (6aa) 6.7 (28aa) 2.6 (11aa) 10.7 (45aa) 6.2 (26aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 4 (17aa) 1 (4aa) 2.6 (11aa) 1.7 (7aa) 1 (4aa) 1.9 (8aa) 2.9 (12aa) 7.4 (31aa) 5 (21aa) 5 (21aa)

>ACMV_08240 ribulose bisphosphate carboxylase
GTGAGTGGCGCGGAACGCATCGAAGCCGATTACCTGATCGAGACCGCGTTCGACCCCGGC
CACGCCGCCGCGGCGATGGCCGGCGAGCAGTCGAGCGGCACCTTCGTGCCGGTGCCCGGC
GAAACCCCCGAACTCAAGGCGCGCGCCGCGGCACGGGTCGAGCGGCTCGATGTCCTGGAA
ACGGTCGGCTCGCCCTCCCTGCCCGGCGCCGGAACCCCGCGCGGCGCGTCGCCGCCGGTC
ATCCGCCGCGCCGCCGTCACCCTTTCCTGGCCGGTGGACAATCTCGGCCCGTCGCTGCCC
AATCTCGTCGCGACCGTCGCCGGCAATCTCTTCGAACTGCGCCAGTTCTCCGGCCTGCGC
CTGCTCGACCTGCGGCTGCCCGCGAGCTTCGCCGCCGCCAATCCCGGCGTGCGCTTCGGC
ATCCCCGGCACGCGGCGGCTTGCCGGCGTCGAGGGGCGGCCGCTGATCGGCACCATCGTC
AAGCCCAGCGTCGGCTTCGATGCCGGGCAGACCGCGGCGCTGGTCGCCACCCTCTGCGAG
GCCGGCATCGACTTCATCAAGGACGACGAGTTGCAGGCCGACGGCCCCGCCTGCCCGTTC
GAGGCCCGCGCCCGCGCGGTGATGCGCGTCGTCAACGATCATGCCGAGCGAACCGGAAAG
AAGGTGATGTTCGCCTTCAACCTGACCGGCGAGGTCGACGAGATGCGCCGCCGGCACGAC
CTCGTGCGCGAGCTCGGCGGCACCTGCGTGATGGCGAGCCTCAATTCCGTGGGCGTCAGC
GGCTTCCTCGCGCTGTCGCGCCACGCCGCGCTGCCGGTCCACGCGCATCGCAACGGCTGG
GGCGCGCTGTCGCGGCACCCGCTGCTGGGCTGGTCCTATGTCGCCTGGCAGAAGATCTGG
CGCCTCGCCGGCGCCGACCACATGCATGTGAACGGCCTGCGCAACAAGTTCTCCGAGGAT
GACGACAGCGTCATCGCCTCCGCGCGCGCCTGTCTCACCCCGATGTCCGACGCGGCGCCG
AACGTCGTCATGCCGGTCTTCTCCTCCGGCCAGTCGGTCCGCCAGGCGGGCGACACCTAC
GCGGCGCTCGGCTCGGCCGACCTGATCTACGCCGCCGGCGGCGGCATCATGGGCCATCCC
GGCGGGCCGGCCGAAGGCGTGGCGGCCTTGCGCGCGGCGTGGGACGCGGCGATGGCGGGC
ATTCCCGCCGCCGAGCACGCGAAGACGCACCCGGCGCTGGCCCGGGCGCTGGAGGGCGCG
TCCTGA


>ACMV_08240 ribulose bisphosphate carboxylase
MSGAERIEADYLIETAFDPGHAAAAMAGEQSSGTFVPVPGETPELKARAAARVERLDVLE
TVGSPSLPGAGTPRGASPPVIRRAAVTLSWPVDNLGPSLPNLVATVAGNLFELRQFSGLR
LLDLRLPASFAAANPGVRFGIPGTRRLAGVEGRPLIGTIVKPSVGFDAGQTAALVATLCE
AGIDFIKDDELQADGPACPFEARARAVMRVVNDHAERTGKKVMFAFNLTGEVDEMRRRHD
LVRELGGTCVMASLNSVGVSGFLALSRHAALPVHAHRNGWGALSRHPLLGWSYVAWQKIW
RLAGADHMHVNGLRNKFSEDDDSVIASARACLTPMSDAAPNVVMPVFSSGQSVRQAGDTY
AALGSADLIYAAGGGIMGHPGGPAEGVAALRAAWDAAMAGIPAAEHAKTHPALARALEGA
S

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.