CDS Information : ACMV_10880

Display	1000bp 10000bp 100000bp Clone

Acidiphilium multivorum AIU301 (= NBRC 100883) chromosome	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Acidiphilium multivorum AIU301 (= NBRC 100883)
Replicon	chromosome
Start / Stop / Direction	1,230,894 / 1,230,466 / -
Location	complement(1230466..1230894)
Type	CDS
Length	429 bp (142 aa)

Product	ribulose bisphosphate carboxylase small chain
Gene name	cbbS
Functional category	Metabolism - Carbohydrate Metabolism
EC number	4.1.1.39
Note
KEGG pathway	map:00630 KO:K01602 map:00710 KO:K01602
Sequence feature
References	Family/Domain:IPR000894 Uniprot:P09658 Pubmed:2820933

BLASTP Database:UniProtKB:2010_04 show BLAST table	1 E=2e-80 A5FWR2_ACICJ Ribulose 1,5-bisphosphate carboxylase small subunit Alignment 2 E=1e-59 A5E994_BRASB Ribulose 1,5-bisphosphate carboxylase small subunit Alignment 3 E=1e-58 D2MCS5_RHOPA Ribulose-bisphosphate carboxylase Alignment 4 E=4e-58 Q6N9I9_RHOPA Ribulose-bisphosphate carboxylase small chain Alignment 5 E=4e-58 B3Q7E2_RHOPT Ribulose-bisphosphate carboxylase Alignment
HAMAP	No significant hit
InterPro Database:interpro:26.0	IPR000894 Ribulose bisphosphate carboxylase, small chain (Domain) SSF55239   RuBisCO_small G3DSA:3.30.190.10   RuBisCO_small PF00101   RuBisCO_small IPR000894 Ribulose bisphosphate carboxylase, small chain (Family) SSF55239   RuBisCO_small G3DSA:3.30.190.10   RuBisCO_small PF00101   RuBisCO_small
SignalP	No significant hit
TMHMM	No significant hit
SOSUI	No significant hit

size of protein	142 amino acids
molecular mass	16,616.77 Da
pI	5.26
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 7 (10aa) 2.8 (4aa) 7 (10aa) 5.6 (8aa) 4.2 (6aa) 2.8 (4aa) 4.9 (7aa) 4.2 (6aa) 5.6 (8aa) 5.6 (8aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 6.3 (9aa) 2.8 (4aa) 2.8 (4aa) 4.2 (6aa) 4.9 (7aa) 2.8 (4aa) 1.4 (2aa) 9.9 (14aa) 8.5 (12aa) 6.3 (9aa)

>ACMV_10880 ribulose bisphosphate carboxylase small chain
ATGAGACTGACCCAGGGCTGCTTTTCGTTTCTTCCCGATCTGACCGATGAACAGATCAGC
CGCCAGATCCAGTACTGCCTCGACAAGGGCTGGGCGGTGAACCTCGAATATACCGACGAC
CCGCACCCGCGGAATACCTACTGGGAAATGTGGGGCCTGCCGATGTTCGACATCCGCGAT
GCCAAGGCGATCATGTCCGAACTCGCGGACTGCCGGCGGATTCACGATGATTGCTATATC
CGCCTCTCGGCGTTCGACGCCACCAACACATGGGAGTCGCTCCGCATTTCCTTCATCGTG
CAGCGGCCGAAGGACGAACCCGGCTTCATGCTGACACGGAGCGAGGCCGCCGGCCGCACC
ATGCGCTACGAAACCCGCGCCTATGTCGTCCAGAAACCCGAAGGCGCGCGCTATGGAAAT
TCCGGGTGA


>ACMV_10880 ribulose bisphosphate carboxylase small chain
MRLTQGCFSFLPDLTDEQISRQIQYCLDKGWAVNLEYTDDPHPRNTYWEMWGLPMFDIRD
AKAIMSELADCRRIHDDCYIRLSAFDATNTWESLRISFIVQRPKDEPGFMLTRSEAAGRT
MRYETRAYVVQKPEGARYGNSG

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.