CDS Information : ACMV_12190

Display	1000bp 10000bp 100000bp Clone

Acidiphilium multivorum AIU301 (= NBRC 100883) chromosome	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Acidiphilium multivorum AIU301 (= NBRC 100883)
Replicon	chromosome
Start / Stop / Direction	1,371,815 / 1,372,762 / +
Location	1371815..1372762
Type	CDS
Length	948 bp (315 aa)

Product	tetraacyldisaccharide 4'-kinase Synonym: lipid A 4'-kinase
Gene name	lpxK
Functional category	Metabolism - Lipid Metabolism
EC number	2.7.1.130
Note
KEGG pathway
Sequence feature
References	HAMAP:MF_00409

BLASTP Database:UniProtKB:2010_04 show BLAST table	1 E=1e-167 A5FW89_ACICJ Lipid-A-disaccharide synthase Alignment 2 E=8e-73 LPXK_GLUDA Tetraacyldisaccharide 4'-kinase Lipid A 4'-kinase Alignment 3 E=3e-72 Q8VMU7_METCH Tetraacyldisaccharide 4'-kinase Alignment 4 E=3e-72 LPXK_METC4 Tetraacyldisaccharide 4'-kinase Lipid A 4'-kinase Alignment 5 E=1e-71 LPXK_RHORT Tetraacyldisaccharide 4'-kinase Lipid A 4'-kinase Alignment
HAMAP Database:HAMAP:20090211	MF_00409   LPXK_MF_00409
InterPro Database:interpro:26.0	IPR003758 Tetraacyldisaccharide-1-P 4'-kinase (Family) TIGR00682   lpxK: tetraacyldisaccharide 4'-kinase MF_00409   LPXK_MF_00409 PF02606   LpxK
SignalP	No significant hit
TMHMM	No significant hit
SOSUI	No significant hit

size of protein	315 amino acids
molecular mass	32,095.89 Da
pI	10.59
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 22.9 (72aa) 5.7 (18aa) 11.4 (36aa) 2.9 (9aa) 4.8 (15aa) 0.3 (1aa) 7.3 (23aa) 0.6 (2aa) 11.1 (35aa) 1.9 (6aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 5.7 (18aa) 1 (3aa) 1 (3aa) 0.6 (2aa) 0.3 (1aa) 1.6 (5aa) 1.9 (6aa) 9.8 (31aa) 6 (19aa) 3.2 (10aa)

>ACMV_12190 tetraacyldisaccharide 4'-kinase
ATGCGCGCCCCCGCCTTCTGGACCACCGACGCCTTCCCGGCGCCGCTCCTCGCCCCGCTC
GGCGCGATCACGCGCGCGCTGACCGCCCGGCGCGTCGCCCGGCCGGGATTCCGCTCCGGC
GCGCGCGTCTTCTGCGCCGGCAATGCCGGGGTCGGCGGCGCCGGCAAGACCATCCTCGCG
CGGCACCTGCTCGCCCACCTCGCCGACCGGGGCGAGACGGTCTTCGCCCTCACCCGCGGG
CATGGCGGGCGCCTCGCCGGGCCGCTGCGGGTCGACCCCGCCCGGCACGGCGCCGCCGAG
GTGGGCGACGAGGCGCTGCTCCTCGCCGCGACCGCGCCGACCATCGTCGCCCGCGACCGC
GCGGCCGGCGCCGCCTTCGCGGTCGCCGCCGGCGCGACCGCCATCGTCATGGATGACGGG
CTGCAGAACCCCGATCCGGTGAAAACCGCGTCGTTTCTCGTCATCGATGGCGGGGCCGGC
TTCGGCAACGGGCGGCTGCTGCCGGCAGGGCCGCTGCGCGAGCCGGTCGAAGCAGCCGCC
CGGCGCTGCGCCGCGGCGGTGCTGATCGGCGCCGACCGCACCGGCGCCCGCGCCGCGCTG
CCGCCATCCCTGCCCGTGCTCACCGCCCGCCTCGTCACCGATGCCGGGCAGCTCGCCGGC
GCCCGCGTGCTCGGCTTCGCCGGGATCGGCCGGCCGGAGAAATTCTTCGAATCACTCAGC
GATGCCGGCGCCGAGATCGCCGGCACGCTGCCCTTCCCCGACCATCACGCCTATCGCCCG
GCCGATCTCGCCCGGCTCGACGCCGAGGCAAGCCGCCTCGGCGCCCGCCTCGCCACCACC
GCGAAGGACGCGGTGAAACTGCCGCCGGCATTCCGCGCACGCTGCGCGGTGATCGAGGCG
GGGCTTGCCTTCGACGACCCGGCCGCGCTTGATCGGTTCCTGACATGA


>ACMV_12190 tetraacyldisaccharide 4'-kinase
MRAPAFWTTDAFPAPLLAPLGAITRALTARRVARPGFRSGARVFCAGNAGVGGAGKTILA
RHLLAHLADRGETVFALTRGHGGRLAGPLRVDPARHGAAEVGDEALLLAATAPTIVARDR
AAGAAFAVAAGATAIVMDDGLQNPDPVKTASFLVIDGGAGFGNGRLLPAGPLREPVEAAA
RRCAAAVLIGADRTGARAALPPSLPVLTARLVTDAGQLAGARVLGFAGIGRPEKFFESLS
DAGAEIAGTLPFPDHHAYRPADLARLDAEASRLGARLATTAKDAVKLPPAFRARCAVIEA
GLAFDDPAALDRFLT

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.