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CDS Information : ACMV_21920

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close this sectionGenomic map

Display Clone

Acidiphilium multivorum AIU301 (= NBRC 100883) chromosome

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Overview 
Genome
Clone

close this sectionLocation

Organism Acidiphilium multivorum AIU301 (= NBRC 100883)
Replicon chromosome
Start / Stop / Direction 2,414,709 / 2,413,522 / -
Location complement(2413522..2414709)
Type CDS
Length 1,188 bp (395 aa)

close this sectionAnnotation

Product elongation factor Tu
Gene name tuf
Functional category Information Pathways
- Translation
EC number
Note
KEGG pathway
Sequence feature
References HAMAP:MF_00118_B

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=0EFTU_ACICJElongation factor TuAlignment
2E=0EFTU_GRABCElongation factor TuAlignment
3E=0EFTU_MAGSAElongation factor TuAlignment
4E=0Q6N0C2_9PROTElongation factor TuAlignment
5E=0EFTU_GLUDAElongation factor TuAlignment
HAMAP
Database:HAMAP:20090211
 [1-395]  61.693 MF_00118_B
MF_00118_B   EFTU_MF_00118_B
InterPro
Database:interpro:26.0
IPR000795 Protein synthesis factor, GTP-binding (Domain)
 [14-27]  3.69999438558106e-24 PR00315 [58-66]  3.69999438558106e-24 PR00315 [78-88]  3.69999438558106e-24 PR00315 [94-105]  3.69999438558106e-24 PR00315 [131-140]  3.69999438558106e-24 PR00315
PR00315   ELONGATNFCT
 [51-66]  PS00301
PS00301   EFACTOR_GTP
 [10-203]  2.4e-58 PF00009
PF00009   GTP_EFTU
IPR004160 Translation elongation factor EFTu/EF1A, C-terminal (Domain)
 [299-393]  5.89999999999994e-34 PF03143
PF03143   GTP_EFTU_D3
IPR004161 Translation elongation factor EFTu/EF1A, domain 2 (Domain)
 [226-295]  4.3e-15 PF03144
PF03144   GTP_EFTU_D2
IPR004541 Translation elongation factor Tu (Family)
 [1-395]  TIGR00485
TIGR00485   EF-Tu
IPR005225 Small GTP-binding protein domain (Domain)
 [10-184]  2.59999946718995e-08 TIGR00231
TIGR00231   small_GTP
IPR009000 Translation elongation and initiation factors/Ribosomal, beta-barrel (Domain)
 [204-303]  1.8e-36 SSF50447
SSF50447   Translat_factor
IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (Domain)
 [303-395]  9.3e-36 SSF50465
SSF50465   Elong_init_C
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 395 amino acids
molecular mass 42,628.74 Da
pI 5.2
aa composition
AlaValLeuIlePheTrpProMetGlySer
9.4
(37aa)
10.1
(40aa)
6.8
(27aa)
6.3
(25aa)
3.3
(13aa)
0
(0aa)
5.3
(21aa)
3.3
(13aa)
9.6
(38aa)
4.1
(16aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
7.3
(29aa)
0.8
(3aa)
2.5
(10aa)
1.8
(7aa)
2.3
(9aa)
4.8
(19aa)
2.5
(10aa)
5.8
(23aa)
6.1
(24aa)
7.8
(31aa)

open this sectionSequence

close this sectionDistribution of Our Microbial Genomic DNA clones

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.