CDS Information : ACMV_32110

Display	1000bp 10000bp 100000bp Clone

Acidiphilium multivorum AIU301 (= NBRC 100883) chromosome	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Acidiphilium multivorum AIU301 (= NBRC 100883)
Replicon	chromosome
Start / Stop / Direction	3,493,155 / 3,492,082 / -
Location	complement(3492082..3493155)
Type	CDS
Length	1,074 bp (357 aa)

Product	alanine racemase
Gene name	alr
Functional category	Metabolism - Amino Acid Metabolism
EC number	5.1.1.1
Note
KEGG pathway
Sequence feature
References	HAMAP:MF_01201

BLASTP Database:UniProtKB:2010_04 show BLAST table	1 E=0 ALR_ACICJ Alanine racemase Alignment 2 E=2e-94 Q0BPY6_GRABC Alanine racemase Alignment 3 E=2e-82 A8U1T1_9PROT Alanine racemase Alignment 4 E=3e-81 B1ZEY2_METPB Alanine racemase Alignment 5 E=1e-80 B1LZ28_METRJ Alanine racemase Alignment
HAMAP Database:HAMAP:20090211	MF_01201   ALR_MF_01201
InterPro Database:interpro:26.0	IPR000821 Alanine racemase region (Domain) PR00992   ALARACEMASE MF_01201   ALR_MF_01201 PS00395   ALANINE_RACEMASE TIGR00492   alr: alanine racemase IPR001608 Alanine racemase, N-terminal (Domain) PF01168   Ala_racemase_N IPR009006 Alanine racemase/group IV decarboxylase, C-terminal (Domain) SSF50621   Alanine racemase C-terminal domain-like G3DSA:2.40.37.10   no description IPR011079 Alanine racemase, C-terminal (Domain) PF00842   Ala_racemase_C IPR020622 Alanine racemase, pyridoxal-phosphate attachment site (Binding_site) PS00395   ALANINE_RACEMASE
SignalP	No significant hit
TMHMM	No significant hit
SOSUI	No significant hit

size of protein	357 amino acids
molecular mass	37,257.53 Da
pI	6.8
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 17.9 (64aa) 4.8 (17aa) 11.2 (40aa) 5.3 (19aa) 2.5 (9aa) 1.4 (5aa) 7.3 (26aa) 1.7 (6aa) 10.4 (37aa) 4.5 (16aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 5.6 (20aa) 0.8 (3aa) 2.8 (10aa) 1.1 (4aa) 2 (7aa) 0.8 (3aa) 2.5 (9aa) 7.8 (28aa) 5 (18aa) 4.5 (16aa)

>ACMV_32110 alanine racemase
ATGAACCACCCGACCCTGACCATCGACCCCGGCGCCGTCGCCGCCAACTGGCAGGCGCTG
GCCGCCCGCCATGCGGGGGAGGTCGCCGGCGTGGTGAAGGCGGATGCCTACGGACTCGGC
GCGGCGCTGATCGCCCCTGCCCTCGCCGCTGCCGGCTGCCGCAGCTTTTTCGTCGCCACG
CTGGATGAGGCCCTTTCCCTGCGCGCCCTGTTGCCGGCGGCGCGGATCGGCGTGCTCAAT
GGCTGCCCGCCCGGCGAGGAGGAAACGATGCGCGCGCGGGAGCTGAGGCCGGTTCTGGGC
TCGCTCGCGGCCTGCGCGCGCTGGCGCGGCGCCGCTGGCGATGACGAGGCGCCGCCTTCG
TTCCTGCATCTCGATACCGGGATGAACCGGCTCGGCCTCGATCGTGACGAGGCGGCCCAT
CTCATCGCCCATCCGACTCTTCTCGACGGGCTGGGCCTGACGCATGTGATGACGCATCTG
GTCGCCGCGGAGGAGCCGGATGCGTCGGCGAATGCCGCGCAGCGCGAGCGTTTCGCCGCT
TTCGCCGCGCGGTTCCCCTGGCTGCGGACCAGCCTTGCCAACTCCTCGGGCCTGTTTCTC
GGCCCTGGGTTCGGCTCCGACCTCGCGCGGCCGGGCTATGCGCTCTATGGCGGCAACCCG
ACACCGACGGCGGCGAATCCGATGCGCCCGGCCATCGCCCTCGCCGCCCCCATCCTGCAG
ATCCGCGCGATCGCTTCGGGCGAGACCGTCGGCTACAACGGCACCTGGCGGGCGGCGCGG
CCCTCGCGTATCGCGACGATCGGCGTCGGCTATGCCGATGGGTTGCCGCGGTCGCTGTCG
AACCGGCTGACGGCGCGCTGGCAGGGGAAGATCATCCCGGTCGCGGGCAGGCTGTCGATG
GACCTGACGACGTTCGACGTCACCGAACATCCCGACATCGCGCCCGGCGACGTCATCGAG
TTGATCGGCCCGGGCCATGACATCGATGCCATCGCCGCCGAGGCCGGCACGATCGGTTAC
GAGATTCTGACCTCGCTCGGCCCGCGCTATCGGCGGGTCGTGAAATCGGTATAA


>ACMV_32110 alanine racemase
MNHPTLTIDPGAVAANWQALAARHAGEVAGVVKADAYGLGAALIAPALAAAGCRSFFVAT
LDEALSLRALLPAARIGVLNGCPPGEEETMRARELRPVLGSLAACARWRGAAGDDEAPPS
FLHLDTGMNRLGLDRDEAAHLIAHPTLLDGLGLTHVMTHLVAAEEPDASANAAQRERFAA
FAARFPWLRTSLANSSGLFLGPGFGSDLARPGYALYGGNPTPTAANPMRPAIALAAPILQ
IRAIASGETVGYNGTWRAARPSRIATIGVGYADGLPRSLSNRLTARWQGKIIPVAGRLSM
DLTTFDVTEHPDIAPGDVIELIGPGHDIDAIAAEAGTIGYEILTSLGPRYRRVVKSV

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.