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CDS Information : ACMV_32740

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close this sectionGenomic map

Display Clone

Acidiphilium multivorum AIU301 (= NBRC 100883) chromosome

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Overview 
Genome
Clone

close this sectionLocation

Organism Acidiphilium multivorum AIU301 (= NBRC 100883)
Replicon chromosome
Start / Stop / Direction 3,556,373 / 3,559,705 / +
Location 3556373..3559705
Type CDS
Length 3,333 bp (1,110 aa)

close this sectionAnnotation

Product trehalose synthase
Gene name
Functional category Metabolism
- Carbohydrate Metabolism
EC number
Note
KEGG pathway
Sequence feature
References Uniprot:Q689D8 Pubmed:16052332

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=0A5G2P3_ACICJTrehalose synthaseAlignment
2E=0Q0BU53_GRABCTrehalose synthaseAlignment
3E=0C3KAW9_PSEFSPutative trehalose synthase proteinAlignment
4E=0Q3KD79_PSEPFPutative trehalose synthase proteinAlignment
5E=0Q4KCQ4_PSEF5Trehalose synthase/maltokinase, putativeAlignment
HAMAP No significant hit
InterPro
Database:interpro:26.0
IPR006047 Glycosyl hydrolase, family 13, catalytic region (Domain)
 [43-396]  4.5e-67 PF00128
PF00128   Alpha-amylase
IPR006589 Glycosyl hydrolase, family 13, subfamily, catalytic region (Domain)
 [28-427]  3.3e-101 SM00642
SM00642   no description
IPR012810 Trehalose synthase/alpha-amylase, N-terminal (Domain)
 [19-561]  TIGR02456
TIGR02456   treS_nterm: trehalose synthase
IPR012811 Trehalose synthase/probable maltokinase, C-terminal (Domain)
 [576-1098]  5.3e-188 TIGR02457
TIGR02457   TreS_Cterm: trehalose synthase-fused proba
IPR013781 Glycoside hydrolase, catalytic core (Domain)
 [16-475]  1.1e-118 G3DSA:3.20.20.80
G3DSA:3.20.20.80   no description
IPR017853 Glycoside hydrolase, catalytic core (Domain)
 [25-476]  5.2e-135 SSF51445
SSF51445   (Trans)glycosidases
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 1110 amino acids
molecular mass 125,529.78 Da
pI 5.59
aa composition
AlaValLeuIlePheTrpProMetGlySer
11
(122aa)
5.8
(64aa)
10
(111aa)
5.8
(64aa)
4
(44aa)
2.2
(24aa)
5.9
(65aa)
2.6
(29aa)
7.1
(79aa)
3.8
(42aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
4.2
(47aa)
0.6
(7aa)
2.4
(27aa)
3.2
(36aa)
3.4
(38aa)
1.6
(18aa)
2.4
(27aa)
9.9
(110aa)
7.9
(88aa)
6.1
(68aa)

open this sectionSequence

close this sectionDistribution of Our Microbial Genomic DNA clones

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.