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CDS Information : ANT_04510

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close this sectionGenomic map

Display Clone

Anaerolinea thermophila UNI-1T (= NBRC 100420T) chromosome

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close this sectionLocation

Organism Anaerolinea thermophila UNI-1T (= NBRC 100420T)
Replicon chromosome
Start / Stop / Direction 485,316 / 486,098 / +
Location 485316..486098
Type CDS
Length 783 bp (260 aa)

close this sectionAnnotation

Product putative 2-oxoglutarate ferredoxin oxidoreductase beta subunit
Gene name
Functional category Metabolism
- Carbohydrate Metabolism
EC number 1.2.7.3
Note
KEGG pathway map:00020 KO:K00175
map:00720 KO:K00175
Sequence feature
References Uniprot:O68229 Pubmed:9495749

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=4e-96A0LEZ9_SYNFMThiamine pyrophosphate enzyme domain protein TPP-bindingAlignment
2E=2e-95A7NPX9_ROSCSThiamine pyrophosphate protein domain protein TPP-bindingAlignment
3E=3e-94A5UT16_ROSS1Thiamine pyrophosphate enzyme domain protein TPP-bindingAlignment
4E=1e-93Q0AX48_SYNWWPutative keto/oxoacid ferredoxin oxidoreductase, beta subunitAlignment
5E=3e-93Q3AEK2_CARHZPutative keto/oxoacid ferredoxin oxidoreductase, beta subunitAlignment
HAMAP No significant hit
InterPro
Database:interpro:26.0
IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding (Domain)
 [58-208]  3.3e-23 PF02775
PF02775   TPP_enzyme_C
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 260 amino acids
molecular mass 28,519.66 Da
pI 5.83
aa composition
AlaValLeuIlePheTrpProMetGlySer
11.2
(29aa)
9.2
(24aa)
6.2
(16aa)
5.8
(15aa)
3.5
(9aa)
1.2
(3aa)
5.8
(15aa)
4.6
(12aa)
8.5
(22aa)
3.8
(10aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
6.5
(17aa)
1.5
(4aa)
3.1
(8aa)
3.5
(9aa)
3.8
(10aa)
1.9
(5aa)
3.1
(8aa)
6.2
(16aa)
4.6
(12aa)
6.2
(16aa)

open this sectionSequence

close this sectionCovered clones

NBRC No. clone name start stop length(bp)
G21-001-020 AT1FE70L00001A07 461,561 502,486 40,926
G21-001-021 AT1FE70L00008H12 483,825 520,028 36,204

close this sectionDistribution of Our Microbial Genomic DNA clones

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.