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CDS Information : ANT_13110

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close this sectionGenomic map

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Anaerolinea thermophila UNI-1T (= NBRC 100420T) chromosome

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Proteome 

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Organism Anaerolinea thermophila UNI-1T (= NBRC 100420T)
Replicon chromosome
Start / Stop / Direction 1,472,714 / 1,473,826 / +
Location 1472714..1473826
Type CDS
Length 1,113 bp (370 aa)

close this sectionAnnotation

Product alanine racemase
Gene name alr
Functional category Metabolism
- Amino Acid Metabolism
EC number 5.1.1.1
Note
KEGG pathway map:00252 KO:K01775
map:00473 KO:K01775
Sequence feature
References HAMAP:MF_01201

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=9e-87ALR_SYMTHAlanine racemaseAlignment
2E=3e-84B2A571_NATTJAlanine racemaseAlignment
3E=9e-83D3EFV3_9BACIAlanine racemaseAlignment
4E=6e-81Q2RGI3_MOOTAAlanine racemaseAlignment
5E=9e-81B9LF03_CHLSYAlanine racemaseAlignment
HAMAP No significant hit
InterPro
Database:interpro:26.0
IPR000821 Alanine racemase region (Domain)
 [5-369]  32.658 MF_01201
MF_01201   ALR_MF_01201
 [29-45]  5.9e-52 PR00992 [65-83]  5.9e-52 PR00992 [126-138]  5.9e-52 PR00992 [160-171]  5.9e-52 PR00992 [203-230]  5.9e-52 PR00992 [259-274]  5.9e-52 PR00992 [295-312]  5.9e-52 PR00992 [351-364]  5.9e-52 PR00992
PR00992   ALARACEMASE
 [34-44]  PS00395
PS00395   ALANINE_RACEMASE
 [6-370]  3.2e-121 TIGR00492
TIGR00492   alr: alanine racemase
IPR001608 Alanine racemase, N-terminal (Domain)
 [12-230]  6.9e-57 PF01168
PF01168   Ala_racemase_N
IPR009006 Alanine racemase/group IV decarboxylase, C-terminal (Domain)
 [230-368]  2.5e-42 G3DSA:2.40.37.10
G3DSA:2.40.37.10   no description
 [234-368]  2.1e-56 SSF50621
SSF50621   Alanine racemase C-terminal domain-like
IPR011079 Alanine racemase, C-terminal (Domain)
 [243-369]  1.5e-41 PF00842
PF00842   Ala_racemase_C
IPR020622 Alanine racemase, pyridoxal-phosphate attachment site (Binding_site)
 [34-44]  PS00395
PS00395   ALANINE_RACEMASE
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 370 amino acids
molecular mass 40,757.58 Da
pI 7.19
aa composition
AlaValLeuIlePheTrpProMetGlySer
12.4
(46aa)
9.2
(34aa)
8.9
(33aa)
4.6
(17aa)
1.9
(7aa)
2.2
(8aa)
5.1
(19aa)
2.4
(9aa)
9.2
(34aa)
3.2
(12aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
4.1
(15aa)
1.1
(4aa)
3
(11aa)
4.3
(16aa)
3.8
(14aa)
2.7
(10aa)
3.5
(13aa)
7.6
(28aa)
4.1
(15aa)
6.8
(25aa)

open this sectionSequence