small fontnormal fontlarge fontmail to

CDS Information : ANT_14160

close allopen/close all

close this sectionGenomic map

Display Clone

Anaerolinea thermophila UNI-1T (= NBRC 100420T) chromosome

Legend Jump
Overview 
Genome
Proteome 
Clone

close this sectionLocation

Organism Anaerolinea thermophila UNI-1T (= NBRC 100420T)
Replicon chromosome
Start / Stop / Direction 1,579,924 / 1,580,496 / +
Location 1579924..1580496
Type CDS
Length 573 bp (190 aa)

close this sectionAnnotation

Product thymidine kinase
Gene name tdk
Functional category Metabolism
- Nucleotide Metabolism
EC number 2.7.1.21
Note
KEGG pathway map:00240 KO:K00857
Sequence feature
References HAMAP:MF_00124

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=3e-68Q2BG37_9BACIThymidine kinaseAlignment
2E=7e-68KITH_BACA2Thymidine kinaseAlignment
3E=3e-67KITH_THETNThymidine kinaseAlignment
4E=4e-67KITH_BACLDThymidine kinaseAlignment
5E=1e-66KITH_BACSUThymidine kinaseAlignment
HAMAP No significant hit
InterPro
Database:interpro:26.0
IPR001267 Thymidine kinase (Family)
 [172-185]  PS00603
PS00603   TK_CELLULAR_TYPE
 [6-185]  5e-57 PF00265
PF00265   TK
 [5-189]  7.5e-83 PIRSF035805
PIRSF035805   Thymidine kinase
IPR020633 Thymidine kinase, conserved site (Conserved_site)
 [172-185]  PS00603
PS00603   TK_CELLULAR_TYPE
IPR020634 Thymidine kinase, subgroup (Family)
 [4-189]  35.392 MF_00124
MF_00124   KITH_MF_00124
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 190 amino acids
molecular mass 21,143.35 Da
pI 6.94
aa composition
AlaValLeuIlePheTrpProMetGlySer
8.9
(17aa)
11.6
(22aa)
4.7
(9aa)
7.4
(14aa)
3.7
(7aa)
0.5
(1aa)
4.7
(9aa)
3.2
(6aa)
6.8
(13aa)
6.3
(12aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
3.2
(6aa)
1.6
(3aa)
1.1
(2aa)
4.2
(8aa)
2.1
(4aa)
5.8
(11aa)
2.1
(4aa)
7.9
(15aa)
5.3
(10aa)
8.9
(17aa)

open this sectionSequence

close this sectionCovered clones

NBRC No. clone name start stop length(bp)
G21-001-062 AT1FE70L00008D07 1,574,365 1,615,161 40,797

close this sectionDistribution of Our Microbial Genomic DNA clones

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.