CDS Information : AO090001000337

Display	1000bp 10000bp 100000bp Clone

Aspergillus oryzae RIB40 (= NBRC 100959) chromosome2	Legend Jump
Contig Overview  Genome Proteome  Clone

Center position	SC001SC003	change
ID		change
Gene name		change

Organism	Aspergillus oryzae RIB40 (= NBRC 100959)
Replicon	chromosome2
Contig	SC001
Start / Stop / Direction	851,246 / 850,566 / -
Location	complement(join(850566..850882, 850956..851018, 851105..851246))
Type	CDS
Length	522 bp (173 aa)
Intron	851104..851019, 850955..850883

Product	glycine cleavage system H protein (lipoate-binding)
Gene name
Functional category	Metabolism - [E] Amino acid transport and metabolism
EC number
Note
KEGG pathway
Sequence feature
References

Proteome results	2D-PAGE YPD_liquid (1) 2D-PAGE YPD_liquid (3) 2D-PAGE YPD_filter (1) 2D-PAGE YPD_filter (3) 1D-PAGE-LC YPD_liquid 1D-PAGE-LC YPD_filter MDLC YPD_liquide MDLC YPD_filter Show sequence

RefSeq	XP_001818870.1 : N-term changed (-364)
GI	169768800 : N-term changed (-364)
GeneID	5990841 : N-term changed (-364)

BLASTP Database:UniProtKB:2010_04 show BLAST table	1 E=2e-94 Q2UNJ7_ASPOR Glycine cleavage system H protein Alignment 2 E=4e-93 B8NJM4_ASPFN Glycine cleavage system H protein Alignment 3 E=2e-73 Q0D0X9_ASPTN Glycine cleavage system H protein Alignment 4 E=5e-73 A1CPR4_ASPCL Glycine cleavage system H protein Alignment 5 E=1e-71 A2QR11_ASPNC Catalytic activity: Alignment
HAMAP	No significant hit
InterPro	No significant hit
SignalP	Bacteria, Gram-positive    Eukaryota    Bacteria, Gram-negative
TMHMM	No significant hit
SOSUI	No significant hit

size of protein	173 amino acids
molecular mass	18,523.81 Da
pI	4.44
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 13.3 (23aa) 10.4 (18aa) 6.9 (12aa) 4.6 (8aa) 3.5 (6aa) 1.2 (2aa) 5.2 (9aa) 1.2 (2aa) 5.2 (9aa) 11 (19aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 2.9 (5aa) 0.6 (1aa) 3.5 (6aa) 1.2 (2aa) 1.7 (3aa) 6.9 (12aa) 1.2 (2aa) 3.5 (6aa) 5.8 (10aa) 10.4 (18aa)

>AO090001000337 glycine cleavage system H protein (lipoate-binding)
ATGTCTGCCATCGCCAGATCCGTCCGCCCCTTCGCCTCTCGCGTGCTTTCCCAGAAGCTC
CCTCTGGCCGCCGCATGCAGGGTTTCGCCCGCAACTGCTTTCCCGCGGGGAAGTGTTAGG
AACTTCTCCCAAAGCCCATTCATGGAGCTGAAGAAGTACACCGAGTCTCACGAATGGATT
GAGTTGGCCGCTGACGGCAAGACTGCCAAGGTCGGAATTACAGAGTACGCTGCCCATTCC
TTGGGCGACGTTGTGTTCGTTGAGCTTCCTGAGGTCGACGCCGAGGTCAGCGCCGGGGAA
CCCGTTGGAGCTGTAGAGTCTGTCAAGTCGGCTTCCGACGTCAACTCTCCTGTCAGCGGT
AAGGTGATCAACGTCAACTCAATTCTGGAGGATAAGGCCAAGTTCATCAACGAGAGCCCC
GAGGGTGACGCCTGGATCGCTGAGATCGAGGTCAAGGACGCCTCAGAGCTTGACAACCTG
CTTGATGCCAAGGCCTACAAGGAAACCCTTGGTGATGAGTAG


>AO090001000337 glycine cleavage system H protein (lipoate-binding)
MSAIARSVRPFASRVLSQKLPLAAACRVSPATAFPRGSVRNFSQSPFMELKKYTESHEWI
ELAADGKTAKVGITEYAAHSLGDVVFVELPEVDAEVSAGEPVGAVESVKSASDVNSPVSG
KVINVNSILEDKAKFINESPEGDAWIAEIEVKDASELDNLLDAKAYKETLGDE


>AO090001000337 with intron
ATGTCTGCCATCGCCAGATCCGTCCGCCCCTTCGCCTCTCGCGTGCTTTCCCAGAAGCTC
CCTCTGGCCGCCGCATGCAGGGTTTCGCCCGCAACTGCTTTCCCGCGGGGAAGTGTTAGG
AACTTCTCCCAAAGCCCATTCAGTAAGGATCTTTCCGAGTTTCCTTCAGAAGGGCATTGA
GATGTCGTATATCAGTTACAAATACTAATATTTTATGAAATGTTGCAGTGGAGCTGAAGA
AGTACACCGAGTCTCACGAATGGATTGAGTTGGCCGCTGACGGCAAGACTGGTGAGTTCA
TAAACGGCGACACATGGCACATTCTAGCCTCAATGCGCATGTTATGCTTACAATGAATGA
ATAGCCAAGGTCGGAATTACAGAGTACGCTGCCCATTCCTTGGGCGACGTTGTGTTCGTT
GAGCTTCCTGAGGTCGACGCCGAGGTCAGCGCCGGGGAACCCGTTGGAGCTGTAGAGTCT
GTCAAGTCGGCTTCCGACGTCAACTCTCCTGTCAGCGGTAAGGTGATCAACGTCAACTCA
ATTCTGGAGGATAAGGCCAAGTTCATCAACGAGAGCCCCGAGGGTGACGCCTGGATCGCT
GAGATCGAGGTCAAGGACGCCTCAGAGCTTGACAACCTGCTTGATGCCAAGGCCTACAAG
GAAACCCTTGGTGATGAGTAG

NBRC No.	clone name	start	stop	length(bp)
G07-001-075	B051F07	700,466	876,037	175,572
G07-001-076	B075G04	732,834	888,295	155,462
G07-001-077	B087D05	748,155	854,320	106,166
G07-001-078	B060G06	779,739	869,173	89,435
G07-001-079	B011A11	798,569	960,488	161,920
G07-001-080	B017E06	798,577	864,138	65,562
G07-001-081	B081G12	798,614	851,988	53,375
G07-001-082	B010H06	799,059	851,988	52,930
G07-001-083	B010G01	812,466	893,733	81,268
G07-001-084	B006H04	845,406	960,455	115,050

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.