Please make javascript effective.
CDS Information : AO090001000635
open/close allGenomic map
Information storage and processing [J] Translation, ribosomal structure and biogenesis [A] RNA processing and modification [K] Transcription [L] Replication, recombination and repair [B] Chromatin structure and dynamics Cellular processes and signaling [D] Cell cycle control, cell division, chromosome partitioning [O] Posttranslational modification, protein turnover, chaperones [Y] Nuclear structure [V] Defense mechanisms [T] Signal transduction mechanisms [M] Cell wall/membrane/envelope biogenesis [N] Cell motility [Z] Cytoskeleton [W] Extracellular structures [U] Intracellular trafficking, secretion, and vesicular transport Metabolism [C] Energy production and conversion [G] Carbohydrate transport and metabolism [E] Amino acid transport and metabolism [F] Nucleotide transport and metabolism [H] Coenzyme transport and metabolism [I] Lipid transport and metabolism [P] Inorganic ion transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism Poorly characterized [R] General function prediction only [S] Function unknown Bi-functional protein Unannotated
Location
Organism
Aspergillus oryzae RIB40 (= NBRC 100959 )
Replicon
chromosome2
Contig
SC001
Start / Stop / Direction
1,673,716 / 1,677,256 / +
Location
join(1673716..1673754, 1675573..1675610, 1675673..1675698, 1675803..1677256)
Type
CDS
Length
1,557 bp (518 aa)
Intron 1673755..1675572, 1675611..1675672, 1675699..1675802
Annotation
Product
predicted protein
Gene name
Functional category
Unannotated
EC number
Note
KEGG pathway
Sequence feature
References
Proteome
Proteome results
2D-PAGE YPD_liquid (1)
1D-PAGE-LC YPD_liquid
1D-PAGE-LC YPD_filter
Show sequence
Related links to external database
Computational search results
BLASTPDatabase:UniProtKB:2010_04
HAMAP
No significant hit
InterPro
No significant hit
SignalP
No significant hit
TMHMM
No significant hit
SOSUI
No significant hit
Calculated information (Amino acid sequence)
size of protein
518 amino acids
molecular mass
56,455.64 Da
pI
4.5
aa composition
Ala Val Leu Ile Phe Trp Pro Met Gly Ser
9.3 (48aa) 6 (31aa) 5.2 (27aa) 3.5 (18aa) 4.1 (21aa) 1.2 (6aa) 4.1 (21aa) 2.7 (14aa) 7.9 (41aa) 10.4 (54aa)
Thr Cys Asn Gln Tyr Lys His Arg Asp Glu
5.6 (29aa) 2.7 (14aa) 5.4 (28aa) 2.5 (13aa) 5.6 (29aa) 6.9 (36aa) 0.4 (2aa) 3.1 (16aa) 9.1 (47aa) 4.4 (23aa)
Sequence
>AO090001000635 predicted protein
ATGTCAACGAGAAGGTCCCGCCTCCTTGCTGATGCTGAGGGGAACAAACTCTTCTATTCC
AACAATGGCACTGAATTCTTCATCCGTGGTGTTGCCTATCAGCGCTACGGTAACGAATCC
AACGGCGACTACACCGACCCTCTGTCCGACCCCAAGAAGTGCGAGCGTGATATCCCTTAC
CTGAAGGAACTGCGGACCAACGTCATCCGTACCTATGCCGTTGACCCCAAGGCCGACCAC
ACTGAGTGCATGAAGATGCTTGACGACGCCGGCATCTACCTTATCACCGATCTGTCCTCC
CCTTCGGAGTCGATCAACCGTAACGACCCCAAGTGGGACGTGGACCTGTACTCCCGCTAC
ACTAGCGTTGTCGATGCCTTCGCCAACTACACCAATGTTATTGGTTTCTTTGCCGGTAAC
GAGGTCGCCAACGACAAGAACAATACCAACTCTATTGCATTCGTCAAGGGCGCTGTTCGT
GACATGAAGAAGTATATCAAGGCCAAGAAGTACCGTGAATCCCTGCTCATCGGTTACGCC
ACCGACGATGACGCTAGCATCCGTGATGACCTGAAGAACTACCTCGTTTGCGGTGAGAGC
GATGCCATGATCGACATGTTCGGTTACAACATCTACGAATGGTGCGGCGATTCGTCCTTC
GAGACCTCTGGTTACAAGGAGCGCACTGAGGAATTCAAGGATTTCCCTGTTCCGGCATTC
TTCTCCGAGTATGGATGCAACGACCCTAAACCTCGCAAGTTCACCGATACCCCTGTCCTG
TACGGCCCCAAGATGAACAACGTCTGGAGCGGTGGTATCGTCTACATGTACTTCCAGGAG
GCCAACGACTATGGATTGGTGAAGGTCGATGGTGACAGCGTCAAGACTCGCGATGACTTC
TCTAACCTCTCTGAGCAAATCCAGAAGGCCACTGCCACTGGCGTCAACAGCGCCAGCTAC
ACTGCCCCTGCTGCTGCTACCGCATCCTGCCCTGCGGTTGGCAAGGACTGGGAAGCCACC
AGTGAACTCCCTCCTTCTCCTAACCCGGATCTGTGCTCCTGCATGGTTGATTCCTTGTCT
TGCGTCGTTAAGGATTCCGTCAAGGAAGACGACTACGAGGACCTGTTTAACTACATCTGC
GCCAAGGATGGAATGTGCGATGGTATCCAGAAGGACGGCACCAAGGGCAAGTACGGAGCG
TACAGTGTGTGCTCTCCCAAGCAGCAGCTCTCCTTCGTCATGAACCAGTGGTACGAGAAG
AGCTCCAACAAAGACCAAGCCTGTGACTTCAATGGTTCGGGCCACACCCAGAGCGCCTCC
AAGAGCGATGGCCAGTGCTCTGACCTGCTGAAGCAGGCCGGCAGCGCTGGTACTGGCAGT
GTCACCGCTTCTCCCACTGCCGGAAGTGCCGCCGCTGGCAGCACCTCCTCTTCCACCTCC
AGCGCCGACAGCGCTGCCGGTGCCGTGAGCCCAATGGCCGTCAAGGTTGGCGGTTGGCAG
TTCGGAGCTTACATCATGACTGCCTTTGTTGCCGGTGCTGGAATGCTCCTGCTGTAA
>AO090001000635 predicted protein
MSTRRSRLLADAEGNKLFYSNNGTEFFIRGVAYQRYGNESNGDYTDPLSDPKKCERDIPY
LKELRTNVIRTYAVDPKADHTECMKMLDDAGIYLITDLSSPSESINRNDPKWDVDLYSRY
TSVVDAFANYTNVIGFFAGNEVANDKNNTNSIAFVKGAVRDMKKYIKAKKYRESLLIGYA
TDDDASIRDDLKNYLVCGESDAMIDMFGYNIYEWCGDSSFETSGYKERTEEFKDFPVPAF
FSEYGCNDPKPRKFTDTPVLYGPKMNNVWSGGIVYMYFQEANDYGLVKVDGDSVKTRDDF
SNLSEQIQKATATGVNSASYTAPAAATASCPAVGKDWEATSELPPSPNPDLCSCMVDSLS
CVVKDSVKEDDYEDLFNYICAKDGMCDGIQKDGTKGKYGAYSVCSPKQQLSFVMNQWYEK
SSNKDQACDFNGSGHTQSASKSDGQCSDLLKQAGSAGTGSVTASPTAGSAAAGSTSSSTS
SADSAAGAVSPMAVKVGGWQFGAYIMTAFVAGAGMLLL
>AO090001000635 with intron
ATGTCAACGAGAAGGTCCCGCCTCCTTGCTGATGCTGAGGTATGATTCTTGACGTCACTT
CGGTCCTTAGTGGATTTTGTCCTTCATGGTCACTTTACACCCTGTAAATTATGTACGCAC
AAAGTGATGGAGGGTTAAATCTCAATTTTTAATTGTTTTTTATTTTCCTTCCTGCAGGCC
CATGGGTTCCATGTAGGCTGTACCTATATATTCATGGGGTCAGGTTTGGACAGACGTTAA
GGTTTTCTGAAACCAAACAGAAATACTTCGTACATCTAATTACATTCAAAGGACAGGCCT
TCGTTTACATCAGACAAAGCAAGTCTAAAATCTTTACTCCGTCTTCACGATGCAATGGAC
TGATACCGAGTATTTTTATCTTATTATTAAAGGCAGTGAAAAATTTTCCCGCCACCAGTG
TTTCGGTCAGCTTCAATGGGTGGACCCCTTTCAGGGTCACGACCCTCGACATTGGAGAGT
AAGACCCTGCCATTGGACCTCTCAGGTGTCCAAGGGTGTGTTCCTGGTAATCACAATGTA
TTGTGGGTGTTATCCGTGTTACCAACCTGAGTAAGCCCTGTACCGTACGTTTATCCCTGC
GGTCCATGCCGACCGGGGCGTCAGATAGGCTACCTTTCTAGAAAGGAAAACAACACATTG
ATGTGATATATAATTCTTGACTACTTGATCAATGTTTTGTGTTACACCAAAGTAATTATC
GCCTGGCTTGAACCAAGTCCTGAAGTACCTCATTAGACAGGCAAAAAGAGGCCAAGGGAC
TTCGGCCCCACCGGTCAAGAATCACAAGCAATTATTGGCAGGGAACAAGACACAGAGCCA
AGGTCGGGACCGGGTGTAATACAGCGTAAGATTGGTGATACAGGGCCGAGGGGACCATCG
TGACCAATTAAGGGTCAGTCTCCACCGACTAGTTTCAGGGCCCACATGTACTAGTTGGGC
TACCCTGAAGTTAAAGGGTCCAGTCATTGGGCAAAGTAAAAAGTATGTACCGAATCCCAG
TGTCCCGAGTGCTCCGTTGGCGTTTATTCTTAGGAATTAGAGGCATGAACGCAGTGGATG
AATGACTACTACAGAATCTGTTCCCTTTTGATCCACTGGCATTCGTGCCTTGGCCAGGAC
TATGAAGAAGATGGCAGCGAGACAATGACATGGGATGGACACCAGTTGCCATGATTCATG
CGGTGGGTTTTCAATATTTTGATGTTGATCATTATTATTACGTCGTTGCCTGTTATAAAA
CAACGAACCAAACAGGTCAAACAGGGCGATTGATTCTATTCTAAGTAAGACAGGCCAGAC
AGACTAAACCTCAGGCTCCTCTCGGCCCCCCCCTTTCCCACTCCTGTCCATTCTTCCTTT
CTCCGTCGCCTCCTCGCCTCCTGCTATTTCTTGTTTCTTATTCTTCCCTATCACTTCCTT
CCCTCGTTACATACCTCTTTGGATACTTTTTTTTTTTTATTTCCCGCAATTCCATTCCAC
GGCTCAGTGTTTCAGCCGTCAGTCACTCGTTGTAGTATATATACTCTTCTAGACTTTCTC
AATCCACTCCGCGATTGTTATTTCATTAATTCGACCTGATATCACTGGGTCTGCAGATCA
AGTTGATCAATCCCTCGTTGTCTTCCGCTGCAGATCATTAACTGTCGTCGCTGCGGCTGG
TATACGTTTGAACGACTGTCAATAGATTCTCATCATGAAGGCCGCATTTGCTCTTGCCGG
GGCTTCGCTCGTGGGCAGCGTCCTGGCGACCTTGCCTGCCATCGAGTCGAAGGTAGTCAT
CAGGTGTTGCGCTTGTCGCGGTCGCATTCATGGCTAACTTGGGAAATTCTGCCTTAGGGG
AACAAACTCTTCTATTCCAACAATGGCACTGAATTGTAAGTGGAAAACCCCTGGCGCTCA
AAGCATCGGTGAGATGGCGGAACTAATATGATATTAGCTTCATCCGTGGTGTTGCCTATC
AGCGTATGTTCCATGCCGGAAAATCTTGAGTCGAGGTAATTGGACTGGGAACTAATGTTG
ATCTATAGAGGAATATTCTTCCAATGGCACCAGCAGCTCCAGCACAGGCTACGGTAACGA
ATCCAACGGCGACTACACCGACCCTCTGTCCGACCCCAAGAAGTGCGAGCGTGATATCCC
TTACCTGAAGGAACTGCGGACCAACGTCATCCGTACCTATGCCGTTGACCCCAAGGCCGA
CCACACTGAGTGCATGAAGATGCTTGACGACGCCGGCATCTACCTTATCACCGATCTGTC
CTCCCCTTCGGAGTCGATCAACCGTAACGACCCCAAGTGGGACGTGGACCTGTACTCCCG
CTACACTAGCGTTGTCGATGCCTTCGCCAACTACACCAATGTTATTGGTTTCTTTGCCGG
TAACGAGGTCGCCAACGACAAGAACAATACCAACTCTATTGCATTCGTCAAGGGCGCTGT
TCGTGACATGAAGAAGTATATCAAGGCCAAGAAGTACCGTGAATCCCTGCTCATCGGTTA
CGCCACCGACGATGACGCTAGCATCCGTGATGACCTGAAGAACTACCTCGTTTGCGGTGA
GAGCGATGCCATGATCGACATGTTCGGTTACAACATCTACGAATGGTGCGGCGATTCGTC
CTTCGAGACCTCTGGTTACAAGGAGCGCACTGAGGAATTCAAGGATTTCCCTGTTCCGGC
ATTCTTCTCCGAGTATGGATGCAACGACCCTAAACCTCGCAAGTTCACCGATACCCCTGT
CCTGTACGGCCCCAAGATGAACAACGTCTGGAGCGGTGGTATCGTCTACATGTACTTCCA
GGAGGCCAACGACTATGGATTGGTGAAGGTCGATGGTGACAGCGTCAAGACTCGCGATGA
CTTCTCTAACCTCTCTGAGCAAATCCAGAAGGCCACTGCCACTGGCGTCAACAGCGCCAG
CTACACTGCCCCTGCTGCTGCTACCGCATCCTGCCCTGCGGTTGGCAAGGACTGGGAAGC
CACCAGTGAACTCCCTCCTTCTCCTAACCCGGATCTGTGCTCCTGCATGGTTGATTCCTT
GTCTTGCGTCGTTAAGGATTCCGTCAAGGAAGACGACTACGAGGACCTGTTTAACTACAT
CTGCGCCAAGGATGGAATGTGCGATGGTATCCAGAAGGACGGCACCAAGGGCAAGTACGG
AGCGTACAGTGTGTGCTCTCCCAAGCAGCAGCTCTCCTTCGTCATGAACCAGTGGTACGA
GAAGAGCTCCAACAAAGACCAAGCCTGTGACTTCAATGGTTCGGGCCACACCCAGAGCGC
CTCCAAGAGCGATGGCCAGTGCTCTGACCTGCTGAAGCAGGCCGGCAGCGCTGGTACTGG
CAGTGTCACCGCTTCTCCCACTGCCGGAAGTGCCGCCGCTGGCAGCACCTCCTCTTCCAC
CTCCAGCGCCGACAGCGCTGCCGGTGCCGTGAGCCCAATGGCCGTCAAGGTTGGCGGTTG
GCAGTTCGGAGCTTACATCATGACTGCCTTTGTTGCCGGTGCTGGAATGCTCCTGCTGTA
A
Covered clones
NBRC No.
clone name
start
stop
length(bp)
G07-001-160
B013A05
1,563,087
1,749,366
186,280
G07-001-161
B034H11
1,563,134
1,740,625
177,492
G07-001-164
B025A01
1,588,481
1,735,236
146,756
G07-001-167
B026F11
1,590,270
1,681,256
90,987
G07-001-168
B012H11
1,594,036
1,698,582
104,547
G07-001-170
B089H04
1,606,053
1,685,680
79,628
G07-001-171
B028H12
1,606,080
1,757,099
151,020
G07-001-173
B033E12
1,606,153
1,759,642
153,490
G07-001-174
B072A07
1,608,775
1,751,587
142,813
G07-001-175
B090C11
1,625,686
1,796,236
170,551
G07-001-176
B096B01
1,641,947
1,699,925
57,979
G07-001-177
B028F02
1,660,212
1,752,199
91,988
G07-001-178
B079B06
1,663,480
1,800,032
136,553
G07-001-179
B064B07
1,669,621
1,757,098
87,478
Distribution of Our Microbial Genomic DNA clones
We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at
http://www.nbrc.nite.go.jp/e/mdna-e.html .