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CDS Information : AO090003000190
open/close allGenomic map
Information storage and processing [J] Translation, ribosomal structure and biogenesis [A] RNA processing and modification [K] Transcription [L] Replication, recombination and repair [B] Chromatin structure and dynamics Cellular processes and signaling [D] Cell cycle control, cell division, chromosome partitioning [O] Posttranslational modification, protein turnover, chaperones [Y] Nuclear structure [V] Defense mechanisms [T] Signal transduction mechanisms [M] Cell wall/membrane/envelope biogenesis [N] Cell motility [Z] Cytoskeleton [W] Extracellular structures [U] Intracellular trafficking, secretion, and vesicular transport Metabolism [C] Energy production and conversion [G] Carbohydrate transport and metabolism [E] Amino acid transport and metabolism [F] Nucleotide transport and metabolism [H] Coenzyme transport and metabolism [I] Lipid transport and metabolism [P] Inorganic ion transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism Poorly characterized [R] General function prediction only [S] Function unknown Bi-functional protein Unannotated
Location
Organism
Aspergillus oryzae RIB40 (= NBRC 100959 )
Replicon
chromosome2
Contig
SC003
Start / Stop / Direction
508,458 / 507,538 / -
Location
complement(join(507538..508230, 508291..508458))
Type
CDS
Length
861 bp (286 aa)
Intron 508290..508231
Annotation
Product
predicted protein
Gene name
Functional category
Unannotated
EC number
Note
KEGG pathway
Sequence feature
References
Computational search results
BLASTPDatabase:UniProtKB:2010_04
HAMAP
No significant hit
InterPro
No significant hit
SignalP
No significant hit
TMHMM
SOSUI
Calculated information (Amino acid sequence)
size of protein
286 amino acids
molecular mass
31,615.26 Da
pI
8.64
aa composition
Ala Val Leu Ile Phe Trp Pro Met Gly Ser
8.4 (24aa) 5.6 (16aa) 10.8 (31aa) 6.6 (19aa) 3.1 (9aa) 1.4 (4aa) 7 (20aa) 2.1 (6aa) 7.3 (21aa) 9.1 (26aa)
Thr Cys Asn Gln Tyr Lys His Arg Asp Glu
6.6 (19aa) 1.7 (5aa) 3.8 (11aa) 2.8 (8aa) 6.6 (19aa) 1.7 (5aa) 4.2 (12aa) 5.2 (15aa) 3.1 (9aa) 2.4 (7aa)
Sequence
>AO090003000190 predicted protein
ATGCGATCCAAACCCAGATCCGTGAAACCATCGGCGTACCCTGCAATACCATTTCATTCC
ATCCGCGCTGTGGGCTTTATTTCCACTCTGGTTGTCGGTATCATTCTAGCCGTCTTCATC
TACAACCTCCATCAAGGTGGTTTCAAACTTCCTTGGGCATTCCTGGTCCTCCTGATAGCC
GTTATCCTTTCCCTTCTTAATTACGTCCTAACTACCATAACCCACTGTTGCTATGGCCTC
TCGCCGCGTCTATCACTCCTATCGAATACGATCTGTCTCCTTCTCTGGCTCATCTCCCTC
GGTCTACTGAGCTGGAGCATGTCGCATACGATCCTGACTACCTGCAACGCCACATACTGG
GCTACTTCTACCGGTATCACCGTTTGCCGGATATACAAGGCATTGTTCGCCTTCACTGTC
TTGGGAAATATCTCGTACATCGCTGCCATCGCCCTCGATGTTATCGTACGCAGACGTCAG
ACTCGTCTGGGTGAGTACGACCCCATGGCCAGCAACCCGGCCTTGAACGATTACAAGATG
CACGATCGCAGCAGTAGTGTTTTGTCGGGAGGCATGGGCCCTTACGGTGGACTCGAGGAA
CAACATCCCGCTTTTCGCTCGAATAATCACGCAGATGAAGTCTACAATGATATCCCTGCT
CCGGGTAATTACGCCGGTCAGACGATGCCCCCGCCTGTATATGGTGCTAGCTCCACCCTT
GAGCAGCATCATGGTGGCGAGGCACAGGATTATTATCAACCAACGCCTACTCGTCCTCGT
GTCCGATTCAGCGCTTATGGACATGACGGGTACAGTCACCCGTCAGAGCAGACGCATTAT
GATCCTGCGGCATATAGATGA
>AO090003000190 predicted protein
MRSKPRSVKPSAYPAIPFHSIRAVGFISTLVVGIILAVFIYNLHQGGFKLPWAFLVLLIA
VILSLLNYVLTTITHCCYGLSPRLSLLSNTICLLLWLISLGLLSWSMSHTILTTCNATYW
ATSTGITVCRIYKALFAFTVLGNISYIAAIALDVIVRRRQTRLGEYDPMASNPALNDYKM
HDRSSSVLSGGMGPYGGLEEQHPAFRSNNHADEVYNDIPAPGNYAGQTMPPPVYGASSTL
EQHHGGEAQDYYQPTPTRPRVRFSAYGHDGYSHPSEQTHYDPAAYR
>AO090003000190 with intron
ATGCGATCCAAACCCAGATCCGTGAAACCATCGGCGTACCCTGCAATACCATTTCATTCC
ATCCGCGCTGTGGGCTTTATTTCCACTCTGGTTGTCGGTATCATTCTAGCCGTCTTCATC
TACAACCTCCATCAAGGTGGTTTCAAACTTCCTTGGGCATTCCTGGTCGTAAGTCTCGCA
TGACAGCCCACAGCTTCAAAAAATGTAACTAATATAAACACACCCTAG CTCCTGATAGCC
GTTATCCTTTCCCTTCTTAATTACGTCCTAACTACCATAACCCACTGTTGCTATGGCCTC
TCGCCGCGTCTATCACTCCTATCGAATACGATCTGTCTCCTTCTCTGGCTCATCTCCCTC
GGTCTACTGAGCTGGAGCATGTCGCATACGATCCTGACTACCTGCAACGCCACATACTGG
GCTACTTCTACCGGTATCACCGTTTGCCGGATATACAAGGCATTGTTCGCCTTCACTGTC
TTGGGAAATATCTCGTACATCGCTGCCATCGCCCTCGATGTTATCGTACGCAGACGTCAG
ACTCGTCTGGGTGAGTACGACCCCATGGCCAGCAACCCGGCCTTGAACGATTACAAGATG
CACGATCGCAGCAGTAGTGTTTTGTCGGGAGGCATGGGCCCTTACGGTGGACTCGAGGAA
CAACATCCCGCTTTTCGCTCGAATAATCACGCAGATGAAGTCTACAATGATATCCCTGCT
CCGGGTAATTACGCCGGTCAGACGATGCCCCCGCCTGTATATGGTGCTAGCTCCACCCTT
GAGCAGCATCATGGTGGCGAGGCACAGGATTATTATCAACCAACGCCTACTCGTCCTCGT
GTCCGATTCAGCGCTTATGGACATGACGGGTACAGTCACCCGTCAGAGCAGACGCATTAT
GATCCTGCGGCATATAGATGA
Covered clones
NBRC No.
clone name
start
stop
length(bp)
G07-003-049
B088A03
355,498
544,134
188,637
G07-003-053
B032B07
375,312
544,247
168,936
G07-003-054
B075C03
388,082
545,928
157,847
G07-003-055
B065E12
391,489
576,270
184,782
G07-003-056
B046H03
403,865
522,489
118,625
G07-003-057
B025D08
418,438
546,098
127,661
G07-003-063
B036F04
448,718
572,987
124,270
G07-003-064
B062D12
458,855
522,757
63,903
G07-003-065
B027B06
476,765
662,159
185,395
G07-003-066
B079C12
478,445
544,188
65,744
G07-003-067
B093E03
478,485
529,526
51,042
G07-003-068
B009F12
493,433
545,921
52,489
G07-003-069
B064G04
500,623
596,839
96,217
G07-003-070
B048B03
504,289
576,305
72,017
G07-003-071
B068B01
504,330
703,713
199,384
G07-003-072
B048E09
506,579
692,844
186,266
Distribution of Our Microbial Genomic DNA clones
We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at
http://www.nbrc.nite.go.jp/e/mdna-e.html .