small fontnormal fontlarge fontmail to

CDS Information : AO090003000693

close allopen/close all

close this sectionGenomic map

Display Clone

Aspergillus oryzae RIB40 (= NBRC 100959) chromosome2

Legend Jump
Contig
Overview 
Genome
Proteome 
Clone

close this sectionLocation

Organism Aspergillus oryzae RIB40 (= NBRC 100959)
Replicon chromosome2
Contig SC003
Start / Stop / Direction 1,874,093 / 1,875,492 / +
Location join(1874093..1874191, 1874282..1874432, 1874492..1875146, 1875204..1875492)
Type CDS
Length 1,194 bp (397 aa)
Intron1874192..1874281, 1874433..1874491, 1875147..1875203

close this sectionAnnotation

Product aspartyl protease
Gene name
Functional category Cellular processes and signaling
- [O] Posttranslational modification, protein turnover, chaperones
EC number
Note
KEGG pathway
Sequence feature
References

close this sectionProteome

Proteome results
2D-PAGE YPD_liquid (1)
2D-PAGE YPD_filter (1)
1D-PAGE-LC YPD_liquid
1D-PAGE-LC YPD_filter
MDLC YPD_liquide
MDLC YPD_filter
Show sequence

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=0Q8NKB2_ASPORAspartyl protease
Pepsinogen
Alignment
2E=0B8N3P1_ASPFNAspartic endopeptidase Pep2Alignment
3E=0Q00070_ASPNGPepsinogenAlignment
4E=0A2QDI4_ASPNCAspartic protease pepE-Aspergillus nigerAlignment
5E=0A1CKP1_ASPCLAspartic endopeptidase Pep2Alignment
HAMAP No significant hit
InterPro No significant hit
SignalP
 [1-17]  0.999 Signal
Eukaryota   
 [1-19]  0.925 Signal
Bacteria, Gram-negative   
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 397 amino acids
molecular mass 43,135.81 Da
pI 4.53
aa composition
AlaValLeuIlePheTrpProMetGlySer
6.5
(26aa)
6.5
(26aa)
11.1
(44aa)
5.3
(21aa)
5.3
(21aa)
0.8
(3aa)
4.5
(18aa)
1.5
(6aa)
9.6
(38aa)
8.1
(32aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
5.5
(22aa)
1.3
(5aa)
4.5
(18aa)
3
(12aa)
4
(16aa)
6.5
(26aa)
1.5
(6aa)
1.8
(7aa)
8.1
(32aa)
4.5
(18aa)

open this sectionSequence

close this sectionCovered clones

NBRC No. clone name start stop length(bp)
G07-003-241 B019C05 1,744,340 1,890,966 146,627
G07-003-243 B093C05 1,752,830 1,894,440 141,611
G07-003-247 B009G12 1,833,691 1,903,382 69,692
G07-003-248 B028G04 1,847,288 1,903,384 56,097
G07-003-249 B055D12 1,848,568 1,958,338 109,771
G07-003-250 B015C12 1,867,551 1,946,788 79,238
G07-003-251 B082C08 1,873,195 2,039,012 165,818

close this sectionDistribution of Our Microbial Genomic DNA clones

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.