CDS Information : AO090003001227

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Aspergillus oryzae RIB40 (= NBRC 100959) chromosome2	Legend Jump
Contig Overview  Genome Proteome  Clone

Center position	SC001SC003	change
ID		change
Gene name		change

Organism	Aspergillus oryzae RIB40 (= NBRC 100959)
Replicon	chromosome2
Contig	SC003
Start / Stop / Direction	3,345,053 / 3,344,158 / -
Location	complement(join(3344158..3344192, 3344259..3344471, 3344528..3344653, 3344871..3344943, 3345051..3345053))
Type	CDS
Length	450 bp (149 aa)
Intron	3345050..3344944, 3344870..3344654, 3344527..3344472, 3344258..3344193

Product	calmodulin and related proteins (EF-Hand superfamily)
Gene name
Functional category	Cellular processes and signaling - [T] Signal transduction mechanisms
EC number
Note
KEGG pathway
Sequence feature
References

Proteome results	2D-PAGE YPD_liquid (1) 2D-PAGE YPD_liquid (3) 2D-PAGE YPD_filter (1) 2D-PAGE YPD_filter (3) 1D-PAGE-LC YPD_liquid 1D-PAGE-LC YPD_filter Show sequence

BLASTP Database:UniProtKB:2010_04 show BLAST table	1 E=1e-75 Q71KR2_PARBR Calmodulin Alignment 2 E=1e-75 Q52QR9_ASPFL Calmodulin A Alignment 3 E=1e-75 Q4WPQ1_ASPFU Calmodulin Alignment 4 E=1e-75 C8VLM3_EMENI Calmodulin (CaM) [Source:UniProtKB/Swiss-Prot;Acc:P60204] Alignment 5 E=1e-75 C6HQZ4_AJECH Calmodulin Alignment
HAMAP	No significant hit
InterPro	No significant hit
SignalP	No significant hit
TMHMM	No significant hit
SOSUI	No significant hit

size of protein	149 amino acids
molecular mass	17,173.99 Da
pI	4
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 5.4 (8aa) 5.4 (8aa) 6 (9aa) 5.4 (8aa) 5.4 (8aa) 0 (0aa) 1.3 (2aa) 6.7 (10aa) 4.7 (7aa) 7.4 (11aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 6 (9aa) 0 (0aa) 4.7 (7aa) 4.7 (7aa) 2 (3aa) 4.7 (7aa) 0.7 (1aa) 6 (9aa) 10.7 (16aa) 12.8 (19aa)

>AO090003001227 calmodulin and related proteins (EF-Hand superfamily)
ATGGCCGACTCTTTGACTGAAGAACAGGTCTCCGAGTACAAGGAGGCCTTCTCCCTATTC
GTAAGTAGTTATCGTCGCCAGATCACCACCAAGGAGTTGGGCACTGTCATGCGCTCTCTG
GGCCAAAACCCCTCTGAGTCGGAACTCCAGGACATGATTAACGAGGTTGACGCCGACAAC
AATGGCACCATTGACTTCCCTGAGTTCCTGACGATGATGGCGAGAAAGATGAAGGATACC
GACTCTGAGGAGGAGATCCGGGAGGCTTTCAAGGTTTTCGACCGCGATAACAACGGCTTC
ATCTCCGCTGCCGAATTGCGTCACGTCATGACCTCCATCGGCGAGAAGCTTACCGATGAC
GAAGTTGATGAGATGATCCGCGAGGCGGATCAGGATGGTGACGGCCGGATTGACTACAAC
GAGTTTGTCCAGCTCATGATGCAAAAATAA


>AO090003001227 calmodulin and related proteins (EF-Hand superfamily)
MADSLTEEQVSEYKEAFSLFVSSYRRQITTKELGTVMRSLGQNPSESELQDMINEVDADN
NGTIDFPEFLTMMARKMKDTDSEEEIREAFKVFDRDNNGFISAAELRHVMTSIGEKLTDD
EVDEMIREADQDGDGRIDYNEFVQLMMQK


>AO090003001227 with intron
ATGGTATGCCATTCTTATTTCCACCGTGCTCAGTTGTGTTTAAAATCCCCCACTTTGCGG
GGCAGATGGCCTGGCATTCTGAACGAAATTGCTGACAGCGCATCGTCTAGGCCGACTCTT
TGACTGAAGAACAGGTCTCCGAGTACAAGGAGGCCTTCTCCCTATTCGTAAGTAGTTATC
GTCGTTCGTGAAAATTGGTTTTGTTAGTCGTCATGATTTGAACACAAGCTGACTTGGCTT
TTCTTGGGTTTCCTATAGGACAAGGACGGTGATGGTTAGTACAGTTTATTTATTCATTCT
CCCATCAAATGCGATCAATATGTTTTAGCCGCCATAATTTTATCCAGTTTCTGTTCGATC
GGCTGAAGTCTTGGCATTGATGAATTGACTTGATATGCAGGCCAGATCACCACCAAGGAG
TTGGGCACTGTCATGCGCTCTCTGGGCCAAAACCCCTCTGAGTCGGAACTCCAGGACATG
ATTAACGAGGTTGACGCCGACAACAATGGCACCATTGACTTCCCTGGTACGAGACGGCTT
CCGTACGATTCATAAATGAAATAGCTGTTAATGTTCAAATAGAGTTCCTGACGATGATGG
CGAGAAAGATGAAGGATACCGACTCTGAGGAGGAGATCCGGGAGGCTTTCAAGGTTTTCG
ACCGCGATAACAACGGCTTCATCTCCGCTGCCGAATTGCGTCACGTCATGACCTCCATCG
GCGAGAAGCTTACCGATGACGAAGTTGATGAGATGATCCGCGAGGCGGATCAGGATGGTG
ACGGCCGGATTGACTGTACGTTTCGCGAAGCCCACCCAGACCCATTGCGGCTGTAAAAAT
GGTGATACTGACCGATTTTAGACAACGAGTTTGTCCAGCTCATGATGCAAAAATAA

NBRC No.	clone name	start	stop	length(bp)
G07-003-410	B087E07	3,272,932	3,429,510	156,579
G07-003-411	B071H05	3,272,934	3,424,989	152,056
G07-003-413	B074D11	3,287,434	3,385,801	98,368
G07-003-415	B070C04	3,290,375	3,360,877	70,503
G07-003-416	B076A09	3,296,774	3,365,420	68,647
G07-003-417	B065E04	3,299,726	3,365,417	65,692
G07-003-418	B020B10	3,302,611	3,457,888	155,278
G07-003-419	B087B08	3,306,289	3,360,878	54,590
G07-003-420	B012B08	3,328,139	3,413,020	84,882

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.