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CDS Information : AO090011000521
open/close allGenomic map
Information storage and processing [J] Translation, ribosomal structure and biogenesis [A] RNA processing and modification [K] Transcription [L] Replication, recombination and repair [B] Chromatin structure and dynamics Cellular processes and signaling [D] Cell cycle control, cell division, chromosome partitioning [O] Posttranslational modification, protein turnover, chaperones [Y] Nuclear structure [V] Defense mechanisms [T] Signal transduction mechanisms [M] Cell wall/membrane/envelope biogenesis [N] Cell motility [Z] Cytoskeleton [W] Extracellular structures [U] Intracellular trafficking, secretion, and vesicular transport Metabolism [C] Energy production and conversion [G] Carbohydrate transport and metabolism [E] Amino acid transport and metabolism [F] Nucleotide transport and metabolism [H] Coenzyme transport and metabolism [I] Lipid transport and metabolism [P] Inorganic ion transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism Poorly characterized [R] General function prediction only [S] Function unknown Bi-functional protein Unannotated
Location
Organism
Aspergillus oryzae RIB40 (= NBRC 100959 )
Replicon
chromosome7
Contig
SC011
Start / Stop / Direction
1,313,672 / 1,315,209 / +
Location
join(1313672..1314714, 1315113..1315209)
Type
CDS
Length
1,140 bp (379 aa)
Intron 1314715..1315112
Annotation
Product
predicted protein
Gene name
Functional category
Unannotated
EC number
Note
KEGG pathway
Sequence feature
References
Related links to external database
Computational search results
BLASTPDatabase:UniProtKB:2010_04
HAMAP
No significant hit
InterPro
No significant hit
SignalP
No significant hit
TMHMM
No significant hit
SOSUI
No significant hit
Calculated information (Amino acid sequence)
size of protein
379 amino acids
molecular mass
41,498.98 Da
pI
9.53
aa composition
Ala Val Leu Ile Phe Trp Pro Met Gly Ser
10.3 (39aa) 4.5 (17aa) 9 (34aa) 3.2 (12aa) 3.2 (12aa) 1.1 (4aa) 6.1 (23aa) 1.8 (7aa) 6.6 (25aa) 11.3 (43aa)
Thr Cys Asn Gln Tyr Lys His Arg Asp Glu
4.7 (18aa) 2.9 (11aa) 3.7 (14aa) 5.8 (22aa) 3.7 (14aa) 5.3 (20aa) 3.4 (13aa) 6.1 (23aa) 4.2 (16aa) 3.2 (12aa)
Sequence
>AO090011000521 predicted protein
ATGTCTGCTCAATCGAGCGTTGAGATCATTCCTCCGACTGTCCCACAGACGTCTGGCGGC
GCAAAGACTAAGCAACCGAAGGCTTCTAAGAAGAAGCCAAACCCGGCGAAGAAAGACCTC
CTATTTCGTACTGTGGGCGAGTCCCTTGCGAGTCAACTCTTCAGCCACTCGAAGCTACAT
AATACATGCACTTGTTGTGCACTCGCTGCGGATCATCAACGGGATCAGGGTTTCTTACTT
CCACCAGCGGCACATCCTACGCATGACGCAAGATCCCGCCGTTGTGGCAGCAGCTGTTGT
GGGAGTAGCAGCAGCAGCCAAACTCTTGTGGAACCCACATCAGACTCAGATGCGCTATCC
TCTCGTTATTCCTCGAACACATACGGTCGTTCAAGCTCCGAATCATCCTTACCTCTAGGA
CGCGCCGGGTTCGTACCGCTGTCCAAGTCGACATCCTTACCGCAGATCAACCTACCCGGT
CGAGATCATATGGACAATGCCGAAGTTTTGGAGAGATTAGCCGGGCGCTATGGGAAAGTC
TCACATATGGTAATACTCGACCGAAGTTACAATTTCTTCCTTAACAAAGCCCGAACCGGG
GCTTTGTGTTATAAGGTGCAAAATCAGGTAGCAATAGTCGCAGGAGACCCCTTATGTGAG
CCGTATCTGTTTTCCGATATACTGGACGAGTTCAAGGCATATCGAAAGCAGTTTCACTGG
GGAATTGCTTTTATGGGGGCCAGCGACAGTCTAGTCAAGCATGCGCGACGGCAACATTGG
GCCACATTACAATTTGGTGCCGAGCGTGTGCTTAATCCAATGACGAACGATGTGCTTATG
GAGCGAAGTGGCAAGCGAATCATCGTCCAAAACAAACAACTCCTCAATCCAGACAAAGGT
GGGATTACCTTAGGTGCTTACGCTCCAGCATACGGGGCAGACCCGTCCCTACAGAGTGAG
CTAATGGGCATTTACGAATCATGGCGGCATCAACGCAACCAGGCCGCCGCCGCAGCCCAG
GCTTTTATTACCGTTTACAACCCGTGTCCCTGGACTGCGACATATGCTTGCCATGGTCCA
TATGGCCAATATCAGCATTCGCAAGCTTGTTCGCTCCGAAGCAAAGTCCGCCTCGCATAA
>AO090011000521 predicted protein
MSAQSSVEIIPPTVPQTSGGAKTKQPKASKKKPNPAKKDLLFRTVGESLASQLFSHSKLH
NTCTCCALAADHQRDQGFLLPPAAHPTHDARSRRCGSSCCGSSSSSQTLVEPTSDSDALS
SRYSSNTYGRSSSESSLPLGRAGFVPLSKSTSLPQINLPGRDHMDNAEVLERLAGRYGKV
SHMVILDRSYNFFLNKARTGALCYKVQNQVAIVAGDPLCEPYLFSDILDEFKAYRKQFHW
GIAFMGASDSLVKHARRQHWATLQFGAERVLNPMTNDVLMERSGKRIIVQNKQLLNPDKG
GITLGAYAPAYGADPSLQSELMGIYESWRHQRNQAAAAAQAFITVYNPCPWTATYACHGP
YGQYQHSQACSLRSKVRLA
>AO090011000521 with intron
ATGTCTGCTCAATCGAGCGTTGAGATCATTCCTCCGACTGTCCCACAGACGTCTGGCGGC
GCAAAGACTAAGCAACCGAAGGCTTCTAAGAAGAAGCCAAACCCGGCGAAGAAAGACCTC
CTATTTCGTACTGTGGGCGAGTCCCTTGCGAGTCAACTCTTCAGCCACTCGAAGCTACAT
AATACATGCACTTGTTGTGCACTCGCTGCGGATCATCAACGGGATCAGGGTTTCTTACTT
CCACCAGCGGCACATCCTACGCATGACGCAAGATCCCGCCGTTGTGGCAGCAGCTGTTGT
GGGAGTAGCAGCAGCAGCCAAACTCTTGTGGAACCCACATCAGACTCAGATGCGCTATCC
TCTCGTTATTCCTCGAACACATACGGTCGTTCAAGCTCCGAATCATCCTTACCTCTAGGA
CGCGCCGGGTTCGTACCGCTGTCCAAGTCGACATCCTTACCGCAGATCAACCTACCCGGT
CGAGATCATATGGACAATGCCGAAGTTTTGGAGAGATTAGCCGGGCGCTATGGGAAAGTC
TCACATATGGTAATACTCGACCGAAGTTACAATTTCTTCCTTAACAAAGCCCGAACCGGG
GCTTTGTGTTATAAGGTGCAAAATCAGGTAGCAATAGTCGCAGGAGACCCCTTATGTGAG
CCGTATCTGTTTTCCGATATACTGGACGAGTTCAAGGCATATCGAAAGCAGTTTCACTGG
GGAATTGCTTTTATGGGGGCCAGCGACAGTCTAGTCAAGCATGCGCGACGGCAACATTGG
GCCACATTACAATTTGGTGCCGAGCGTGTGCTTAATCCAATGACGAACGATGTGCTTATG
GAGCGAAGTGGCAAGCGAATCATCGTCCAAAACAAACAACTCCTCAATCCAGACAAAGGT
GGGATTACCTTAGGTGCTTACGCTCCAGCATACGGGGCAGACCCGTCCCTACAGAGTGAG
CTAATGGGCATTTACGAATCATGGCGGCATCAACGCAACCAGGCCGCCGCCGCAGCCCAG
GCTTTTATTACCGTTTACAACCCGTTCGACTTTCCTAATCTGATGATCTATATATATACC
CGTGGCCCCGATGGTGTCGCTAACGGATTTGCGGCGCTTCGTCGGGTTGGTGCCAACGAA
GGATATCATCTTGACCCCTGCATCGCGGCCCCCGGAGCACCCAAAGGGATTAGTGACTTG
CTGGCTTACGCAGCCATGGCGCTTCTCAATCAAATGAATATATCTTACCTCAGTCTCGGA
TACGAACCTCTTACGATCCTGGGCGATGTGACGGGCTTACCATCGGCCATTGAGAAGATT
ACGCGGTCGTTATACCGTCACACCTTCCAACGATTACCGATAGGAGGGAAAAAGGCATAT
CATGACAAGTTCCGCCCCGACCCGTTCTTGGACTCAGAGTTATACTTGGTGTTTCCATCA
G GTGTCCCTGGACTGCGACATATGCTTGCCATGGTCCATATGGCCAATATCAGCATTCGC
AAGCTTGTTCGCTCCGAAGCAAAGTCCGCCTCGCATAA
Covered clones
NBRC No.
clone name
start
stop
length(bp)
G07-011-124
B082B04
1,143,597
1,342,940
199,344
G07-011-130
B021E02
1,229,059
1,412,483
183,425
G07-011-132
B027D05
1,230,559
1,361,297
130,739
G07-011-137
B080G03
1,239,206
1,337,658
98,453
G07-011-138
B071C08
1,256,884
1,378,417
121,534
G07-011-139
B026F08
1,263,749
1,409,164
145,416
G07-011-140
B058G02
1,263,768
1,331,130
67,363
G07-011-141
B047F02
1,294,689
1,412,484
117,796
G07-011-142
B080C09
1,300,786
1,379,811
79,026
G07-011-143
B076D08
1,300,790
1,407,344
106,555
G07-011-144
B087D03
1,308,205
1,407,250
99,046
G07-011-145
B049F10
1,312,847
1,500,192
187,346
Distribution of Our Microbial Genomic DNA clones
We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at
http://www.nbrc.nite.go.jp/e/mdna-e.html .