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CDS Information : AO090011000566
open/close allGenomic map
Information storage and processing [J] Translation, ribosomal structure and biogenesis [A] RNA processing and modification [K] Transcription [L] Replication, recombination and repair [B] Chromatin structure and dynamics Cellular processes and signaling [D] Cell cycle control, cell division, chromosome partitioning [O] Posttranslational modification, protein turnover, chaperones [Y] Nuclear structure [V] Defense mechanisms [T] Signal transduction mechanisms [M] Cell wall/membrane/envelope biogenesis [N] Cell motility [Z] Cytoskeleton [W] Extracellular structures [U] Intracellular trafficking, secretion, and vesicular transport Metabolism [C] Energy production and conversion [G] Carbohydrate transport and metabolism [E] Amino acid transport and metabolism [F] Nucleotide transport and metabolism [H] Coenzyme transport and metabolism [I] Lipid transport and metabolism [P] Inorganic ion transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism Poorly characterized [R] General function prediction only [S] Function unknown Bi-functional protein Unannotated
Location
Organism
Aspergillus oryzae RIB40 (= NBRC 100959 )
Replicon
chromosome7
Contig
SC011
Start / Stop / Direction
1,428,972 / 1,428,122 / -
Location
complement(join(1428122..1428406, 1428463..1428537, 1428604..1428778, 1428842..1428972))
Type
CDS
Length
666 bp (221 aa)
Intron 1428841..1428779, 1428603..1428538, 1428462..1428407
Annotation
Product
predicted protein
Gene name
Functional category
Metabolism - [F] Nucleotide transport and metabolism
EC number
Note
KEGG pathway
Sequence feature
References
Related links to external database
Computational search results
BLASTPDatabase:UniProtKB:2010_04
HAMAP
No significant hit
InterPro
No significant hit
SignalP
No significant hit
TMHMM
No significant hit
SOSUI
No significant hit
Calculated information (Amino acid sequence)
size of protein
221 amino acids
molecular mass
24,414.62 Da
pI
4.76
aa composition
Ala Val Leu Ile Phe Trp Pro Met Gly Ser
10.9 (24aa) 9.5 (21aa) 8.6 (19aa) 4.1 (9aa) 5 (11aa) 1.8 (4aa) 6.3 (14aa) 1.4 (3aa) 6.8 (15aa) 4.1 (9aa)
Thr Cys Asn Gln Tyr Lys His Arg Asp Glu
3.2 (7aa) 0.9 (2aa) 5.4 (12aa) 4.1 (9aa) 1.4 (3aa) 5 (11aa) 2.7 (6aa) 4.5 (10aa) 5.4 (12aa) 9 (20aa)
Sequence
>AO090011000566 predicted protein
ATGAGCAACCCAGTACCACTGCGTATCGCTGTTCTCGTCAACACGCCCCCTAATAACGAG
TTCTGGAATGATGTGAACGAGGCATATCGTGCTGCTTTTCAAGCCGTTGCACCAGACGCC
CAGATTGACATTGGAGGCAAAGCGGACGCCTCCTCTTCTGAGCCCTGGGTTCTAGGCGTG
CTAGACTTCCTGCGTAAAACAGCGCGGGAATCACCCAATACCAAGATTCTAGGTATCTGT
TGGGGTCACCAGGCTATTTCAAGGGCATTCGGGGGAGCGGTGCGAGCTGTGCCTACAGGT
CCGATTGCTGGCGTTGAAGATGTAAAGTTGACAGATGCCGGGAAGAAGTTCTTTGCTTGT
GCCCCAGGCATTGAATCTTATAGATTGCCGGAGTTTCATGTACGAGAGGTAGCAAAACCT
GGATTAGGATTTGTTCACTTGGCTGAAAACCATGAAATGTTTGTGAATCAAGAGAATACG
GTCTTGTCGTTCCAAGCACATCCAGAGGTCCAGGCCGCACTCGCCAAGAAGATGTTGTTG
GAAGAGGACGATGTTTACAATGGCAATCTTTCCCAGCAAGAGCTCGAGGATCATCTGAAA
AAGCTCGATCAGCCAACAGATGGGTTTGAGGTGCTGAGACGGGTGATTGAGTGGGTGGAG
GAGTGA
>AO090011000566 predicted protein
MSNPVPLRIAVLVNTPPNNEFWNDVNEAYRAAFQAVAPDAQIDIGGKADASSSEPWVLGV
LDFLRKTARESPNTKILGICWGHQAISRAFGGAVRAVPTGPIAGVEDVKLTDAGKKFFAC
APGIESYRLPEFHVREVAKPGLGFVHLAENHEMFVNQENTVLSFQAHPEVQAALAKKMLL
EEDDVYNGNLSQQELEDHLKKLDQPTDGFEVLRRVIEWVEE
>AO090011000566 with intron
ATGAGCAACCCAGTACCACTGCGTATCGCTGTTCTCGTCAACACGCCCCCTAATAACGAG
TTCTGGAATGATGTGAACGAGGCATATCGTGCTGCTTTTCAAGCCGTTGCACCAGACGCC
CAGATTGACATGTACGACCCTGTCTTTCAAGGCAACTTTCCCGATCCCCAACACTACGAC
CTGATCGTCCTAAG TGGAGGCAAAGCGGACGCCTCCTCTTCTGAGCCCTGGGTTCTAGGC
GTGCTAGACTTCCTGCGTAAAACAGCGCGGGAATCACCCAATACCAAGATTCTAGGTATC
TGTTGGGGTCACCAGGCTATTTCAAGGGCATTCGGGGGAGCGGTGCGAGCTGTGCCTACA
GGTCCGATTGTAAGTACATTAATTGGTTAGTGACGCACTAGAGAAAGCCATAAGCTCATA
CTCGGTTTATCCTAG GCTGGCGTTGAAGATGTAAAGTTGACAGATGCCGGGAAGAAGTTC
TTTGCTTGTGCCCCAGGCATTGAATCTTATGTGCGTGTTCCGTTGATTTCCCATCCGTCG
ATTTTCCTACTAATCAACCTCCTCAG AGATTGCCGGAGTTTCATGTACGAGAGGTAGCAA
AACCTGGATTAGGATTTGTTCACTTGGCTGAAAACCATGAAATGTTTGTGAATCAAGAGA
ATACGGTCTTGTCGTTCCAAGCACATCCAGAGGTCCAGGCCGCACTCGCCAAGAAGATGT
TGTTGGAAGAGGACGATGTTTACAATGGCAATCTTTCCCAGCAAGAGCTCGAGGATCATC
TGAAAAAGCTCGATCAGCCAACAGATGGGTTTGAGGTGCTGAGACGGGTGATTGAGTGGG
TGGAGGAGTGA
Covered clones
NBRC No.
clone name
start
stop
length(bp)
G07-011-145
B049F10
1,312,847
1,500,192
187,346
G07-011-153
B006F01
1,385,316
1,558,284
172,969
G07-011-154
B050B08
1,411,206
1,470,719
59,514
G07-011-155
B042B05
1,411,874
1,502,501
90,628
G07-011-156
B074F10
1,411,918
1,515,371
103,454
G07-011-157
B062E09
1,412,482
1,492,461
79,980
G07-011-158
B067E04
1,424,401
1,530,621
106,221
G07-011-159
B081E05
1,427,552
1,500,225
72,674
Distribution of Our Microbial Genomic DNA clones
We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at
http://www.nbrc.nite.go.jp/e/mdna-e.html .