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CDS Information : AO090011000572
open/close allGenomic map
Information storage and processing [J] Translation, ribosomal structure and biogenesis [A] RNA processing and modification [K] Transcription [L] Replication, recombination and repair [B] Chromatin structure and dynamics Cellular processes and signaling [D] Cell cycle control, cell division, chromosome partitioning [O] Posttranslational modification, protein turnover, chaperones [Y] Nuclear structure [V] Defense mechanisms [T] Signal transduction mechanisms [M] Cell wall/membrane/envelope biogenesis [N] Cell motility [Z] Cytoskeleton [W] Extracellular structures [U] Intracellular trafficking, secretion, and vesicular transport Metabolism [C] Energy production and conversion [G] Carbohydrate transport and metabolism [E] Amino acid transport and metabolism [F] Nucleotide transport and metabolism [H] Coenzyme transport and metabolism [I] Lipid transport and metabolism [P] Inorganic ion transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism Poorly characterized [R] General function prediction only [S] Function unknown Bi-functional protein Unannotated
Location
Organism
Aspergillus oryzae RIB40 (= NBRC 100959 )
Replicon
chromosome7
Contig
SC011
Start / Stop / Direction
1,441,331 / 1,439,200 / -
Location
complement(join(1439200..1440718, 1440783..1440950, 1441015..1441331))
Type
CDS
Length
2,004 bp (667 aa)
Intron 1441014..1440951, 1440782..1440719
Annotation
Product
permeases of the major facilitator superfamily
Gene name
Functional category
Poorly characterized - [R] General function prediction only
EC number
Note
KEGG pathway
Sequence feature
References
Related links to external database
Computational search results
BLASTPDatabase:UniProtKB:2010_04
HAMAP
No significant hit
InterPro
No significant hit
SignalP
No significant hit
TMHMM
SOSUI
Calculated information (Amino acid sequence)
size of protein
667 amino acids
molecular mass
75,133.32 Da
pI
7.33
aa composition
Ala Val Leu Ile Phe Trp Pro Met Gly Ser
9.1 (61aa) 6.4 (43aa) 9 (60aa) 4.6 (31aa) 6.3 (42aa) 3 (20aa) 4.6 (31aa) 3.4 (23aa) 8.4 (56aa) 6.6 (44aa)
Thr Cys Asn Gln Tyr Lys His Arg Asp Glu
4.2 (28aa) 0.9 (6aa) 3.1 (21aa) 3.1 (21aa) 5.2 (35aa) 6 (40aa) 2.8 (19aa) 3.3 (22aa) 4.5 (30aa) 5.1 (34aa)
Sequence
>AO090011000572 permeases of the major facilitator superfamily
ATGGCCGACTTTGGACCTCGTGCCCCCCATGGGCCCGATATGTCGGGGACTCACAATCCC
CTCGAGGACATGGATCATCACGAGAAGGGTGCTTTCGATGCGCTGATTCGCCCCGATGAC
AGCTATACTCCGGAAGGTACCTACTGGGCCGATCTGCCCCTCCTCAAGAAAGTCAAGTTC
GTGAGCTCCTATGATGCGAAGGAAGCCAAGCGCGAACTAGGCGGCATCTGGGAAATGATG
AAGCAAGATCCCTTGTCGCCCGTTTCTTATTACTTCAAGAACATGGTGCTTCCCGGTGCT
GGTCTCGGTCTAGAGGGTTACGTGCTCTTCTCCATCGGAAACGTTAAGCCTCTCTTCCAG
GCCGCCTTCAAGTCGTGTTGGAAGGATCATAAAATCTGCAATGCACAATGGCTCAACGCC
ATCGATTACCTCGAAATTATCGGTATCATTGTGGGTCAGATCTTAGTTGGTATTGTCGGT
GATTGGCTTGGTCGTCGTTGGGGTTTGATTCAGGATGCTGCTATCATGTTTATCGGTCTG
ATCATGCTTACCGCTGCTTGGGGTGTGACCCAGAATGGCTGGGTGATCTGCTACGCTTGG
TCACTGTTCTTCTACGGTATTGGTGTTGGTGGCGAATATCCTATGACCGCAACTAGTGGT
ATGGAGAATGCCGTTGGCTCTGGAAAAGTCTCGACCAAGGAGGACCGTCTTCACCGCGGT
AGGAAGGTCACTAGCGCTTTCCTGATGCAAGGTTGGGGTCAGTTCTTCAACCAGGTTATT
CTCATCATCTTGCTGCTCTGCTTCCACCATGGCAGCGGTAACCCTCCCTACTCGTCTGTG
TCCGCTCAATGGGTGTACCGTGTTTCCTTTGCCATTCCTGCGGTGGGTACTTTGTGGCTG
GTCTACTACCGTGCCTACCACATGAAGGCTGCTAGCAAGCAGTTGGCGGCGGCCAAGAAG
AAGGCATCCGTCACCGGCTACGATTTCAACTCTCTTGCACTGACCTTCAAGTACTTTGGA
CCCCGTATCCTGGCGACTGCTGGTGGTTGGTTCGCCAACGATGTCTTTTTCTACGGCAAC
AAGCTCTTCCAGTCGGAATTCATCTCGGTCATCAGCCCAGCCTCCAAGTCGATCATGCCA
ACCTGGCTGTGGAACTTGTGCAACGTGGGTGTCTCGCTGGTCGGCTACTATCTCGCCTCG
TTCCTCATCGACAACAAGCTCTACGGCCGCAAGTGGATGCAGATGGTCGGTTTTCTGATG
TGTTTCGTCCTCTTCGTTGTTCCCGCCTTCCACTACAAGTACTACACCTCGCCAGAGCAC
ATCAAGGAGTTCCAGACCATGTACTTCCTGAGTTCCTTCTTCAACCAGTTTGGCCCTAAC
TCGGTCACCTTCCTGGTTGCAGCCGAGGTCTTTCCCACTCCTATTCGTGCCACCGCCCAC
GGTCTTTCTGCCGCCGCCGGTAAGGCTGGTGCCCTTTTGGCGTCAGTTTTGTACAACTAC
ATCGACACGCAGACCAAGTTCTACGTGGTTCCCTGGTTTGGTCTTGCAGGCATGGTCCTG
ACCTACGTCTTCCTCCCCGACACCACTGGTCTGGATCTCAAGGAACAGGAGCGTCGCTGG
CAGTACATCCGTGACGGCCGTGAGCACGAGTACCACGGCCCTGCTGTTCACCCGAAGCAC
TTGTCCCTCTGGGAACGCCTGATGGGCAAGGGCAAGCTCTACGATGCTGATGCCGATTAC
AAGCAGAAGGTTGAGGAGTATCGTGCCGAATGGGAGTCTGCAATGGCTGCTCGTATTGCC
GAGAAGGAGAAGGGTGAAGAACTCGCCATGGATACTGACGAGAGCCTCTTGGAAGGACAC
GTTCACTCGTACTTTCATCGGACTAGCCCTATGTTCCGCCCGATGGAGCAGAATGCGAAG
TCGGATAACTTCGCTCTGCCTCCCGCGGCCCAGGAAGATGACTCGACCGTGTCTTTCAAC
GAAAAGTCTGAAAAATCCACCTGA
>AO090011000572 permeases of the major facilitator superfamily
MADFGPRAPHGPDMSGTHNPLEDMDHHEKGAFDALIRPDDSYTPEGTYWADLPLLKKVKF
VSSYDAKEAKRELGGIWEMMKQDPLSPVSYYFKNMVLPGAGLGLEGYVLFSIGNVKPLFQ
AAFKSCWKDHKICNAQWLNAIDYLEIIGIIVGQILVGIVGDWLGRRWGLIQDAAIMFIGL
IMLTAAWGVTQNGWVICYAWSLFFYGIGVGGEYPMTATSGMENAVGSGKVSTKEDRLHRG
RKVTSAFLMQGWGQFFNQVILIILLLCFHHGSGNPPYSSVSAQWVYRVSFAIPAVGTLWL
VYYRAYHMKAASKQLAAAKKKASVTGYDFNSLALTFKYFGPRILATAGGWFANDVFFYGN
KLFQSEFISVISPASKSIMPTWLWNLCNVGVSLVGYYLASFLIDNKLYGRKWMQMVGFLM
CFVLFVVPAFHYKYYTSPEHIKEFQTMYFLSSFFNQFGPNSVTFLVAAEVFPTPIRATAH
GLSAAAGKAGALLASVLYNYIDTQTKFYVVPWFGLAGMVLTYVFLPDTTGLDLKEQERRW
QYIRDGREHEYHGPAVHPKHLSLWERLMGKGKLYDADADYKQKVEEYRAEWESAMAARIA
EKEKGEELAMDTDESLLEGHVHSYFHRTSPMFRPMEQNAKSDNFALPPAAQEDDSTVSFN
EKSEKST
>AO090011000572 with intron
ATGGCCGACTTTGGACCTCGTGCCCCCCATGGGCCCGATATGTCGGGGACTCACAATCCC
CTCGAGGACATGGATCATCACGAGAAGGGTGCTTTCGATGCGCTGATTCGCCCCGATGAC
AGCTATACTCCGGAAGGTACCTACTGGGCCGATCTGCCCCTCCTCAAGAAAGTCAAGTTC
GTGAGCTCCTATGATGCGAAGGAAGCCAAGCGCGAACTAGGCGGCATCTGGGAAATGATG
AAGCAAGATCCCTTGTCGCCCGTTTCTTATTACTTCAAGAACATGGTGCTTCCCGGTGCT
GGTCTCGGTCTAGAGGGGTAAGTACTGTCTCCATTGCGAGCGCCTCAGAACTGGTCGGAC
GCTAACCCATGAGCGCTCTAG TTACGTGCTCTTCTCCATCGGAAACGTTAAGCCTCTCTT
CCAGGCCGCCTTCAAGTCGTGTTGGAAGGATCATAAAATCTGCAATGCACAATGGCTCAA
CGCCATCGATTACCTCGAAATTATCGGTATCATTGTGGGTCAGATCTTAGTTGGTATTGT
CGGTGATTGGTATGCACTTCTTCTATTGGATGCTTATGATTGGTCGGCAATGGGTTTTCT
AACGGGTTTCTAG GCTTGGTCGTCGTTGGGGTTTGATTCAGGATGCTGCTATCATGTTTA
TCGGTCTGATCATGCTTACCGCTGCTTGGGGTGTGACCCAGAATGGCTGGGTGATCTGCT
ACGCTTGGTCACTGTTCTTCTACGGTATTGGTGTTGGTGGCGAATATCCTATGACCGCAA
CTAGTGGTATGGAGAATGCCGTTGGCTCTGGAAAAGTCTCGACCAAGGAGGACCGTCTTC
ACCGCGGTAGGAAGGTCACTAGCGCTTTCCTGATGCAAGGTTGGGGTCAGTTCTTCAACC
AGGTTATTCTCATCATCTTGCTGCTCTGCTTCCACCATGGCAGCGGTAACCCTCCCTACT
CGTCTGTGTCCGCTCAATGGGTGTACCGTGTTTCCTTTGCCATTCCTGCGGTGGGTACTT
TGTGGCTGGTCTACTACCGTGCCTACCACATGAAGGCTGCTAGCAAGCAGTTGGCGGCGG
CCAAGAAGAAGGCATCCGTCACCGGCTACGATTTCAACTCTCTTGCACTGACCTTCAAGT
ACTTTGGACCCCGTATCCTGGCGACTGCTGGTGGTTGGTTCGCCAACGATGTCTTTTTCT
ACGGCAACAAGCTCTTCCAGTCGGAATTCATCTCGGTCATCAGCCCAGCCTCCAAGTCGA
TCATGCCAACCTGGCTGTGGAACTTGTGCAACGTGGGTGTCTCGCTGGTCGGCTACTATC
TCGCCTCGTTCCTCATCGACAACAAGCTCTACGGCCGCAAGTGGATGCAGATGGTCGGTT
TTCTGATGTGTTTCGTCCTCTTCGTTGTTCCCGCCTTCCACTACAAGTACTACACCTCGC
CAGAGCACATCAAGGAGTTCCAGACCATGTACTTCCTGAGTTCCTTCTTCAACCAGTTTG
GCCCTAACTCGGTCACCTTCCTGGTTGCAGCCGAGGTCTTTCCCACTCCTATTCGTGCCA
CCGCCCACGGTCTTTCTGCCGCCGCCGGTAAGGCTGGTGCCCTTTTGGCGTCAGTTTTGT
ACAACTACATCGACACGCAGACCAAGTTCTACGTGGTTCCCTGGTTTGGTCTTGCAGGCA
TGGTCCTGACCTACGTCTTCCTCCCCGACACCACTGGTCTGGATCTCAAGGAACAGGAGC
GTCGCTGGCAGTACATCCGTGACGGCCGTGAGCACGAGTACCACGGCCCTGCTGTTCACC
CGAAGCACTTGTCCCTCTGGGAACGCCTGATGGGCAAGGGCAAGCTCTACGATGCTGATG
CCGATTACAAGCAGAAGGTTGAGGAGTATCGTGCCGAATGGGAGTCTGCAATGGCTGCTC
GTATTGCCGAGAAGGAGAAGGGTGAAGAACTCGCCATGGATACTGACGAGAGCCTCTTGG
AAGGACACGTTCACTCGTACTTTCATCGGACTAGCCCTATGTTCCGCCCGATGGAGCAGA
ATGCGAAGTCGGATAACTTCGCTCTGCCTCCCGCGGCCCAGGAAGATGACTCGACCGTGT
CTTTCAACGAAAAGTCTGAAAAATCCACCTGA
Covered clones
NBRC No.
clone name
start
stop
length(bp)
G07-011-145
B049F10
1,312,847
1,500,192
187,346
G07-011-153
B006F01
1,385,316
1,558,284
172,969
G07-011-154
B050B08
1,411,206
1,470,719
59,514
G07-011-155
B042B05
1,411,874
1,502,501
90,628
G07-011-156
B074F10
1,411,918
1,515,371
103,454
G07-011-157
B062E09
1,412,482
1,492,461
79,980
G07-011-158
B067E04
1,424,401
1,530,621
106,221
G07-011-159
B081E05
1,427,552
1,500,225
72,674
Distribution of Our Microbial Genomic DNA clones
We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at
http://www.nbrc.nite.go.jp/e/mdna-e.html .