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CDS Information : AO090011000579

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close this sectionGenomic map

Display Clone

Aspergillus oryzae RIB40 (= NBRC 100959) chromosome7

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Contig
Overview 
Genome
Proteome 
Clone

close this sectionLocation

Organism Aspergillus oryzae RIB40 (= NBRC 100959)
Replicon chromosome7
Contig SC011
Start / Stop / Direction 1,466,041 / 1,468,405 / +
Location join(1466041..1466267, 1466321..1466402, 1466465..1467988, 1468049..1468405)
Type CDS
Length 2,190 bp (729 aa)
Intron1466268..1466320, 1466403..1466464, 1467989..1468048

close this sectionAnnotation

Product thioredoxin/protein disulfide isomerase
Gene name
Functional category Cellular processes and signaling
- [O] Posttranslational modification, protein turnover, chaperones
EC number
Note
KEGG pathway
Sequence feature
References

close this sectionRelated links to external database

RefSeqXP_001826192.1 : N-term changed (+2008)
GI169783460 : N-term changed (+2008)
GeneID5998295 : N-term changed (+2008)

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=0Q2U056_ASPORThioredoxin/protein disulfide isomeraseAlignment
2E=0B8NB27_ASPFNDisulfide isomerase, putativeAlignment
3E=0Q0CXS0_ASPTNPutative uncharacterized proteinAlignment
4E=0A2QD55_ASPNCContig An02c0170, complete genome.Alignment
5E=0Q4X1B1_ASPFUDisulfide isomerase, putativeAlignment
HAMAP No significant hit
InterPro No significant hit
SignalP
 [1-20]  0.992 Signal
Bacteria, Gram-positive   
 [1-20]  1 Signal
Eukaryota   
 [1-20]  1 Signal
Bacteria, Gram-negative   
TMHMM
 [665-687]  Transmembrane (o-i)
Transmembrane 1   
SOSUI
 [4-26]  Transmembrane [660-682]  Transmembrane
Transmembrane 2   

close this sectionCalculated information (Amino acid sequence)

size of protein 729 amino acids
molecular mass 81,570.44 Da
pI 7.34
aa composition
AlaValLeuIlePheTrpProMetGlySer
8.1
(59aa)
6.2
(45aa)
8.8
(64aa)
4.4
(32aa)
5.1
(37aa)
1.9
(14aa)
5.3
(39aa)
1.5
(11aa)
7.1
(52aa)
7.5
(55aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
5.2
(38aa)
1.2
(9aa)
4.1
(30aa)
2.9
(21aa)
2.9
(21aa)
6.9
(50aa)
1.8
(13aa)
6
(44aa)
6.3
(46aa)
6.7
(49aa)

open this sectionSequence

close this sectionCovered clones

NBRC No. clone name start stop length(bp)
G07-011-145 B049F10 1,312,847 1,500,192 187,346
G07-011-153 B006F01 1,385,316 1,558,284 172,969
G07-011-154 B050B08 1,411,206 1,470,719 59,514
G07-011-155 B042B05 1,411,874 1,502,501 90,628
G07-011-156 B074F10 1,411,918 1,515,371 103,454
G07-011-157 B062E09 1,412,482 1,492,461 79,980
G07-011-158 B067E04 1,424,401 1,530,621 106,221
G07-011-159 B081E05 1,427,552 1,500,225 72,674
G07-011-160 B007B09 1,444,020 1,557,507 113,488
G07-011-161 B091G12 1,444,632 1,517,477 72,846
G07-011-162 B053E07 1,444,637 1,502,495 57,859
G07-011-163 B089D09 1,449,927 1,605,848 155,922
G07-011-164 B040F12 1,449,932 1,506,565 56,634
G07-011-165 B088B05 1,449,964 1,502,906 52,943

close this sectionDistribution of Our Microbial Genomic DNA clones

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.