CDS Information : AO090012000189

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Aspergillus oryzae RIB40 (= NBRC 100959) chromosome4	Legend Jump
Contig Overview  Genome Proteome  Clone

Center position	SC012SC102SC166	change
ID		change
Gene name		change

Organism	Aspergillus oryzae RIB40 (= NBRC 100959)
Replicon	chromosome4
Contig	SC012
Start / Stop / Direction	468,770 / 470,751 / +
Location	join(468770..469009, 469276..469785, 469840..470751)
Type	CDS
Length	1,662 bp (553 aa)
Intron	469010..469275, 469786..469839

Product	karyopherin (importin) alpha
Gene name
Functional category	Cellular processes and signaling - [U] Intracellular trafficking, secretion, and vesicular transport
EC number
Note
KEGG pathway
Sequence feature
References

Proteome results	2D-PAGE YPD_liquid (1) 2D-PAGE YPD_filter (2) 1D-PAGE-LC YPD_liquid 1D-PAGE-LC YPD_filter MDLC YPD_filter Show sequence

RefSeq	XP_001727247.1 : N-term changed (+1070)
GI	169762694 : N-term changed (+1070)
GeneID	5987721 : N-term changed (+1070)

BLASTP Database:UniProtKB:2010_04 show BLAST table	1 E=0 Q2UDF7_ASPOR Karyopherin Alignment 2 E=0 B8N5X8_ASPFN Karyopherin alpha subunit, putative Alignment 3 E=0 Q4WZQ9_ASPFU Karyopherin alpha subunit, putative Alignment 4 E=0 B0XUX5_ASPFC Karyopherin alpha subunit, putative Alignment 5 E=0 A1DIG9_NEOFI Karyopherin alpha subunit, putative Alignment
HAMAP	No significant hit
InterPro	No significant hit
SignalP	No significant hit
TMHMM	No significant hit
SOSUI	No significant hit

size of protein	553 amino acids
molecular mass	60,722.92 Da
pI	4.7
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 9.9 (55aa) 6 (33aa) 8.9 (49aa) 7.6 (42aa) 2.9 (16aa) 1.3 (7aa) 4.5 (25aa) 2 (11aa) 7.4 (41aa) 5.4 (30aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 5.1 (28aa) 1.8 (10aa) 5.2 (29aa) 6.1 (34aa) 1.4 (8aa) 4.3 (24aa) 0.7 (4aa) 6 (33aa) 5.4 (30aa) 8 (44aa)

>AO090012000189 karyopherin (importin) alpha
ATGGCCGAGCGCTACATCCCAGAGCATCGTCGTACCCAGTTCAAGGCTAGGAATCAGTTC
CGGCCTGACGAGCTTCGTCGTCGTCGTGAGGAGCAGCAAGTTGAAATTCGCAAGCAGAAA
AGAGAAGAGAATTTGGCCAAGAGGAGAGGTATTCAGACCCGCGATGGTGGGATTGGTGTG
GGAGGCGGCATGGCCGCTGCCACCGAGAGTGATGATGAAGCCACTGCCATAGAAAGCGAG
CTTAATGTGGAACTACCAGAGATGGTTAAGGGTGTCTTCTCAGATCAGATCGAGTCGCAA
ATTCAAGCCACAACTAAGTTCAGGAAGCTGCTTTCCAAGGAGCGCAACCCTCCCATCGAG
CGCGTTATTGAGACTGGTGTCGTGAGCCGTTTCGTGGAGTTCCTCCGGTCTCCTCATACC
CTGGTCCAATTCGAGGCCGCCTGGGCCTTGACCAACATTGCATCTGGATCTGCTCAGCAA
ACCCAGGTGGTTATCGAAGCCGGTGCTGTGCCCATTTTCGTCGAGCTGTTGAGCAGCCCG
GAACCGGATGTTCGGGAACAGGCCGTTTGGGCTCTGGGTAACATTGCTGGTGATAGCCCT
CAATGCCGTGACTTCGTCCTCAATGCCGGCGCCCTCCGTCCTCTTTTGAACTTGATCAAC
GATGGTCGGAAGTTGAGCATGTTGCGCAACGCTACATGGACTTTGAGTAACTTCTGCCGT
GGCAAGACCCCCCAGCCCGATTGGAACACGATCGCTCCTGCTCTTCCTGTCCTCGCCAAG
CTTATCTACATGCTTGATGATGAAGTCCTCATTGATGCTTGCTGGGCCATTTCCTATCTC
TCCGACGGTGCAAACGATAAGATCCAGGCTGTTATCGAGGCAGGCATCCCTCGTCGCCTT
GTTGAGCTTCTTATGCACGCCTCGACCTCCGTTCAGACTCCTGCCCTTCGGTCGGTTGGA
AACATTGTGACCGGTGACGACGTCCAGACTCAGGTTATCATCAACTGCGGTGCTCTCCCC
GCTCTCCTCTCTCTCCTCAGCTCTACCAAGGATGGTATCCGTAAGGAGGCTTGCTGGACT
ATTTCCAACGTCACTGCTGGCAACTCTAGTCAGATCCAGGCTGTCGTCGACGCTGGCATC
ATTCCCCCGCTGATCAACTTGCTTGCCAACGGCGACTTTAAGACCCGCAAGGAAGCTTGC
TGGGCTATCTCCAACGCCACTTCTGGTGGTCTGCAGAAGCCTGAGCAGATCCGCTACCTC
GTTTCTCAGGGATGCATCAAGCCGCTCTGCGACCTGCTTGCTTGCCCCGACAACAAGATC
ATCCAAGTTGCTTTGGATGGCCTGGAGAACATCCTCAAGGTTGGTGAGATGGACAAGGAG
GCTGCACAGACTGGCGAGGCCCGTGTCAACCGCTATGCTCTGTTCATTGAAGAGGCCGGC
GGTATGGAGAAGATCCACGACTGCCAGAACAACGCCAACGAGGAGATCTACATGAAGGCG
TACAACATCATTGAGAAGTACTTCTCCGATGAAGAAGAGGCCGGTGGTGATATCGATGAG
CTTGCTCCTCAACAAACCCAAACAGGATTCACCCTAGGCACTGCCCAACAGCAGCCGGGT
GGATTCAACTTCGCCAACGGTGGCGACTCCATGGACATGTAA


>AO090012000189 karyopherin (importin) alpha
MAERYIPEHRRTQFKARNQFRPDELRRRREEQQVEIRKQKREENLAKRRGIQTRDGGIGV
GGGMAAATESDDEATAIESELNVELPEMVKGVFSDQIESQIQATTKFRKLLSKERNPPIE
RVIETGVVSRFVEFLRSPHTLVQFEAAWALTNIASGSAQQTQVVIEAGAVPIFVELLSSP
EPDVREQAVWALGNIAGDSPQCRDFVLNAGALRPLLNLINDGRKLSMLRNATWTLSNFCR
GKTPQPDWNTIAPALPVLAKLIYMLDDEVLIDACWAISYLSDGANDKIQAVIEAGIPRRL
VELLMHASTSVQTPALRSVGNIVTGDDVQTQVIINCGALPALLSLLSSTKDGIRKEACWT
ISNVTAGNSSQIQAVVDAGIIPPLINLLANGDFKTRKEACWAISNATSGGLQKPEQIRYL
VSQGCIKPLCDLLACPDNKIIQVALDGLENILKVGEMDKEAAQTGEARVNRYALFIEEAG
GMEKIHDCQNNANEEIYMKAYNIIEKYFSDEEEAGGDIDELAPQQTQTGFTLGTAQQQPG
GFNFANGGDSMDM


>AO090012000189 with intron
ATGGCCGAGCGCTACATCCCAGAGCATCGTCGTACCCAGTTCAAGGCTAGGAATCAGTTC
CGGCCTGACGAGCTTCGTCGTCGTCGTGAGGAGCAGCAAGTTGAAATTCGCAAGCAGAAA
AGAGAAGAGAATTTGGCCAAGAGGAGAGGTATTCAGACCCGCGATGGTGGGATTGGTGTG
GGAGGCGGCATGGCCGCTGCCACCGAGAGTGATGATGAAGCCACTGCCATAGAAAGCGAG
GTATGCTTTATCTAAGTCGTTATTATTCATTTCTATTCGCATTACTTTAGATACCTGTAG
ATTTGTTTTCCTCCAGGCTTCTGTCTTGTGTTTTTTTTTTTTTTTTTTTTTTTTCCTTTT
CCCTTCTTATGCGCCTAGCGATGAGGTTTTCACCGCCCTATTGCTGGTCGTGAGCTTGAA
GATGGAGCACACGATCACCTTTCACTCATCACTCTTGTTGTGTTTCATGCTTCTGAAAGA
CAAATGGCTAATTAAATATTTTCCAGCTTAATGTGGAACTACCAGAGATGGTTAAGGGTG
TCTTCTCAGATCAGATCGAGTCGCAAATTCAAGCCACAACTAAGTTCAGGAAGCTGCTTT
CCAAGGAGCGCAACCCTCCCATCGAGCGCGTTATTGAGACTGGTGTCGTGAGCCGTTTCG
TGGAGTTCCTCCGGTCTCCTCATACCCTGGTCCAATTCGAGGCCGCCTGGGCCTTGACCA
ACATTGCATCTGGATCTGCTCAGCAAACCCAGGTGGTTATCGAAGCCGGTGCTGTGCCCA
TTTTCGTCGAGCTGTTGAGCAGCCCGGAACCGGATGTTCGGGAACAGGCCGTTTGGGCTC
TGGGTAACATTGCTGGTGATAGCCCTCAATGCCGTGACTTCGTCCTCAATGCCGGCGCCC
TCCGTCCTCTTTTGAACTTGATCAACGATGGTCGGAAGTTGAGCATGTTGCGCAACGCTA
CATGGACTTTGAGTAACTTCTGCCGTGGCAAGACCCCCCAGCCCGATTGGAACACGGTAT
GTTACTTTACAAACACTACAAATAAGCGAGCTTGACTAATACCATTGTAGATCGCTCCTG
CTCTTCCTGTCCTCGCCAAGCTTATCTACATGCTTGATGATGAAGTCCTCATTGATGCTT
GCTGGGCCATTTCCTATCTCTCCGACGGTGCAAACGATAAGATCCAGGCTGTTATCGAGG
CAGGCATCCCTCGTCGCCTTGTTGAGCTTCTTATGCACGCCTCGACCTCCGTTCAGACTC
CTGCCCTTCGGTCGGTTGGAAACATTGTGACCGGTGACGACGTCCAGACTCAGGTTATCA
TCAACTGCGGTGCTCTCCCCGCTCTCCTCTCTCTCCTCAGCTCTACCAAGGATGGTATCC
GTAAGGAGGCTTGCTGGACTATTTCCAACGTCACTGCTGGCAACTCTAGTCAGATCCAGG
CTGTCGTCGACGCTGGCATCATTCCCCCGCTGATCAACTTGCTTGCCAACGGCGACTTTA
AGACCCGCAAGGAAGCTTGCTGGGCTATCTCCAACGCCACTTCTGGTGGTCTGCAGAAGC
CTGAGCAGATCCGCTACCTCGTTTCTCAGGGATGCATCAAGCCGCTCTGCGACCTGCTTG
CTTGCCCCGACAACAAGATCATCCAAGTTGCTTTGGATGGCCTGGAGAACATCCTCAAGG
TTGGTGAGATGGACAAGGAGGCTGCACAGACTGGCGAGGCCCGTGTCAACCGCTATGCTC
TGTTCATTGAAGAGGCCGGCGGTATGGAGAAGATCCACGACTGCCAGAACAACGCCAACG
AGGAGATCTACATGAAGGCGTACAACATCATTGAGAAGTACTTCTCCGATGAAGAAGAGG
CCGGTGGTGATATCGATGAGCTTGCTCCTCAACAAACCCAAACAGGATTCACCCTAGGCA
CTGCCCAACAGCAGCCGGGTGGATTCAACTTCGCCAACGGTGGCGACTCCATGGACATGT
AA

NBRC No.	clone name	start	stop	length(bp)
G07-012-037	B067A09	345,486	523,312	177,827
G07-012-039	B079F08	385,329	481,257	95,929
G07-012-040	B047A04	385,330	473,294	87,965
G07-012-041	B040A03	395,156	473,293	78,138
G07-012-044	B007H04	396,074	471,469	75,396
G07-012-047	B022H11	401,050	473,299	72,250
G07-012-048	B015H06	462,536	561,488	98,953
G07-012-049	B041E07	466,164	521,106	54,943

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.