CDS Information : AO090023000711

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Aspergillus oryzae RIB40 (= NBRC 100959) chromosome3	Legend Jump
Contig Overview  Genome Proteome  Clone

Center position	SC02347Q_0172SC026	change
ID		change
Gene name		change

Organism	Aspergillus oryzae RIB40 (= NBRC 100959)
Replicon	chromosome3
Contig	SC023
Start / Stop / Direction	1,877,075 / 1,875,193 / -
Location	complement(join(1875193..1875686, 1875742..1876483, 1876546..1876814, 1876961..1877075))
Type	CDS
Length	1,620 bp (539 aa)
Intron	1876960..1876815, 1876545..1876484, 1875741..1875687

Product	acyl-CoA dehydrogenases
Gene name
Functional category	Metabolism - [I] Lipid transport and metabolism
EC number
Note
KEGG pathway
Sequence feature
References

RefSeq	XP_001821225.1 : N-term changed (-1389)
GI	169773513 : N-term changed (-1389)
GeneID	5993227 : N-term changed (-1389)

BLASTP Database:UniProtKB:2010_04 show BLAST table	1 E=0 Q2UGU2_ASPOR Acyl-CoA dehydrogenases Alignment 2 E=0 B8N9H3_ASPFN Acyl-CoA dehydrogenase, putative Alignment 3 E=0 B0Y642_ASPFC Acyl-CoA dehydrogenase, putative Alignment 4 E=0 Q4WP95_ASPFU Acyl-CoA dehydrogenase, putative Alignment 5 E=0 A1CXC4_NEOFI Acyl-CoA dehydrogenase, putative Alignment
HAMAP	No significant hit
InterPro	No significant hit
SignalP	No significant hit
TMHMM	No significant hit
SOSUI	No significant hit

size of protein	539 amino acids
molecular mass	60,178.50 Da
pI	7.57
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 7.4 (40aa) 7.1 (38aa) 7.4 (40aa) 5.2 (28aa) 3.2 (17aa) 1.9 (10aa) 4.8 (26aa) 2.6 (14aa) 9.1 (49aa) 5.9 (32aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 4.8 (26aa) 1.7 (9aa) 3.7 (20aa) 3.9 (21aa) 4.3 (23aa) 7.2 (39aa) 2.6 (14aa) 5 (27aa) 5.2 (28aa) 7.1 (38aa)

>AO090023000711 acyl-CoA dehydrogenases
ATGTCCAAAACATTCTCAAAGGAAGACGTCGCATCGCATAACAAGCCAGATAACCTCTGG
GTTGTTATCGATGAAGATGTGTATGACTTGACTAAATTTCAGGACGAGCACCCTGTTCTG
TCGCGAGTCGGAGGAAAGGATGCTTCGAAGCAGTTCTGGAAGTATCACAACGAAGGGATT
CTCAAGAAGTACAAAAGCAAGCTGCAGGTTGGTTCCTTGAACACAAAAGCCGCAGATGCG
TCGGCACCGGAACCAGCAGCAGCCAAGGAAACCCCCAAGCCTCAGCAGGCAGCTCCAGTG
GACGTTGGATCGGCCAAGTCGTCCGAGCCCCAAGAACCTTATGGTGACTTGATTCCCTTC
GCCGATCCCTCATGGTATCAAGGTTACTCCTCTCCATACTTTAACCAGACTCATGCAGCC
CTCCGCGCAGAAGTTCGCCAATGGGTTGAGTCTGAAATTGAGCCCTATGTGACCGAATGG
GATGAGGCCAAGAATGTTCCCGATCATATTTACAAGCAGATGGGTGAACGGGGTTACCTT
GCCGGATTATTGGGTGGCAAATTCCCTGTCGACCACACGAAGAACCGTGTGCAGTCTGTC
GCTCCTGAAAACTGGGACTTGTTTCACGAGATGCTTCTTACCGACGAGCTGTCCCGCGCC
GGTAGTGGTGGTCTTGTCTGGAATTTGATCGGTGGCTACGGTATCGGCTGCCCCCCACTA
GTCAAATATGGCAAGAAGCCTCTGGTTGACAGAATTCTCCCCGGTATTTTGAATGGCGAT
AAGCGTATCTGTCTTGCTATCACCGAGCCGGATGCTGGAAGCGATGTTGCCAACCTTACC
TGCGAGGCTAAACTCACCCCCGATGGCAAGCACTACATTGTCAACGGTGAGAAGAAGTGG
ATTACCAACGGTGTCTATGCCGATTACTTCACCACCGCTGTTCGTACGGGCGGGCCCGGT
ATGAATGGTCTTAGTGTCCTTCTCATTGAGAGAGAGCACGGCGGAGTCAGCACGAGACGC
ATGGACTGCCAGGGTGTCTGGAGCAGCGGCACGACTTATGTCACCTTCGAGGATGTGAAG
GTGCCGGTGGAGAACCTCATTGGAAAGGAAAATCAGGGTTTCAAGGTCATCATGACCAAC
TTTAACCACGAGCGTATTGGAATCGTCATCCAGTGTTGTCGGTTCGCTCGTGTGTGCTAC
GAGGAAGCGGTGAAATATGCCCACAAGCGTAGGACGTTCGGCAAGAGACTCATCGACCAC
CCTGTCATCCGTATGAAGCTCGCACATATGGCCCGTCAGATTGAAGCGACGTATAACTGG
CTGGAAAATATCATCTACCAATGCCAGTCCATGGATGAGACTGAAGCAATGCTCAAGCTG
GGCGGTGCAATCGCAAGTCTCAAGGCTCAGTCGACGACCACCTTCGAGTTCTGCGCTCGT
GAGGCCAGTCAGATTTTCGGTGGTCTGAGCTACAGCCGCGGAGGCCAGGGCGGTAAGGTG
GAGCGGCTATACCGTGATGTTCGTGCCTACGCTATCCCTGGTGGAAGTGAGGAGATCATG
CTGGACCTGAGTATGCGCCAGAGTCTCCGTGTGCACAAGATGTTCGGTATGAAGTTGTAA


>AO090023000711 acyl-CoA dehydrogenases
MSKTFSKEDVASHNKPDNLWVVIDEDVYDLTKFQDEHPVLSRVGGKDASKQFWKYHNEGI
LKKYKSKLQVGSLNTKAADASAPEPAAAKETPKPQQAAPVDVGSAKSSEPQEPYGDLIPF
ADPSWYQGYSSPYFNQTHAALRAEVRQWVESEIEPYVTEWDEAKNVPDHIYKQMGERGYL
AGLLGGKFPVDHTKNRVQSVAPENWDLFHEMLLTDELSRAGSGGLVWNLIGGYGIGCPPL
VKYGKKPLVDRILPGILNGDKRICLAITEPDAGSDVANLTCEAKLTPDGKHYIVNGEKKW
ITNGVYADYFTTAVRTGGPGMNGLSVLLIEREHGGVSTRRMDCQGVWSSGTTYVTFEDVK
VPVENLIGKENQGFKVIMTNFNHERIGIVIQCCRFARVCYEEAVKYAHKRRTFGKRLIDH
PVIRMKLAHMARQIEATYNWLENIIYQCQSMDETEAMLKLGGAIASLKAQSTTTFEFCAR
EASQIFGGLSYSRGGQGGKVERLYRDVRAYAIPGGSEEIMLDLSMRQSLRVHKMFGMKL


>AO090023000711 with intron
ATGTCCAAAACATTCTCAAAGGAAGACGTCGCATCGCATAACAAGCCAGATAACCTCTGG
GTTGTTATCGATGAAGATGTGTATGACTTGACTAAATTTCAGGACGAGCACCCTGGTATG
TTTGAACAGTTCCGCGGATCGTCAGATGCATTCGCACGATGCTAACGTCACTTTGCATAG
GTGGAAAAAAGAGTACGTCATAATGTCCACAATTCATCTTTGGACATGGTAGGAGTGCCG
ATGCTGACTATGCACCTCTAGTTCTGTCGCGAGTCGGAGGAAAGGATGCTTCGAAGCAGT
TCTGGAAGTATCACAACGAAGGGATTCTCAAGAAGTACAAAAGCAAGCTGCAGGTTGGTT
CCTTGAACACAAAAGCCGCAGATGCGTCGGCACCGGAACCAGCAGCAGCCAAGGAAACCC
CCAAGCCTCAGCAGGCAGCTCCAGTGGACGTTGGATCGGCCAAGTCGTCCGAGCCCCAAG
AACCTTATGGTGACTTGATTCCCTTCGCCGATCCCTCATGGTATCAAGGTGTAAGTTTTG
CCTGTCACACACCATCCGGGAGACTACAGACTAACCAATGATTCCTCGACAGTACTCCTC
TCCATACTTTAACCAGACTCATGCAGCCCTCCGCGCAGAAGTTCGCCAATGGGTTGAGTC
TGAAATTGAGCCCTATGTGACCGAATGGGATGAGGCCAAGAATGTTCCCGATCATATTTA
CAAGCAGATGGGTGAACGGGGTTACCTTGCCGGATTATTGGGTGGCAAATTCCCTGTCGA
CCACACGAAGAACCGTGTGCAGTCTGTCGCTCCTGAAAACTGGGACTTGTTTCACGAGAT
GCTTCTTACCGACGAGCTGTCCCGCGCCGGTAGTGGTGGTCTTGTCTGGAATTTGATCGG
TGGCTACGGTATCGGCTGCCCCCCACTAGTCAAATATGGCAAGAAGCCTCTGGTTGACAG
AATTCTCCCCGGTATTTTGAATGGCGATAAGCGTATCTGTCTTGCTATCACCGAGCCGGA
TGCTGGAAGCGATGTTGCCAACCTTACCTGCGAGGCTAAACTCACCCCCGATGGCAAGCA
CTACATTGTCAACGGTGAGAAGAAGTGGATTACCAACGGTGTCTATGCCGATTACTTCAC
CACCGCTGTTCGTACGGGCGGGCCCGGTATGAATGGTCTTAGTGTCCTTCTCATTGAGAG
AGAGCACGGCGGAGTCAGCACGAGACGCATGGACTGCCAGGGTGTCTGGAGCAGCGGCAC
GACTTATGTCACCTTCGAGGATGTGAAGGTGCCGGTGGAGAACCTCATTGGAAAGGAAAA
TCAGGGTTTCAAGGGTAAGCCCCCTAGCGCTCTTGCTTCTCTTTTCACAGCAACTAACCG
GTTGTGTAGTCATCATGACCAACTTTAACCACGAGCGTATTGGAATCGTCATCCAGTGTT
GTCGGTTCGCTCGTGTGTGCTACGAGGAAGCGGTGAAATATGCCCACAAGCGTAGGACGT
TCGGCAAGAGACTCATCGACCACCCTGTCATCCGTATGAAGCTCGCACATATGGCCCGTC
AGATTGAAGCGACGTATAACTGGCTGGAAAATATCATCTACCAATGCCAGTCCATGGATG
AGACTGAAGCAATGCTCAAGCTGGGCGGTGCAATCGCAAGTCTCAAGGCTCAGTCGACGA
CCACCTTCGAGTTCTGCGCTCGTGAGGCCAGTCAGATTTTCGGTGGTCTGAGCTACAGCC
GCGGAGGCCAGGGCGGTAAGGTGGAGCGGCTATACCGTGATGTTCGTGCCTACGCTATCC
CTGGTGGAAGTGAGGAGATCATGCTGGACCTGAGTATGCGCCAGAGTCTCCGTGTGCACA
AGATGTTCGGTATGAAGTTGTAA

NBRC No.	clone name	start	stop	length(bp)
G07-023-181	B029E06	1,744,523	1,897,955	153,433
G07-023-182	B087B05	1,750,200	1,882,167	131,968
G07-023-187	B043C11	1,758,719	1,880,325	121,607
G07-023-188	B042D08	1,761,451	1,929,768	168,318
G07-023-189	B076H12	1,780,197	1,970,691	190,495
G07-023-190	B001F04	1,786,286	1,983,124	196,839
G07-023-191	B025H08	1,808,287	1,977,652	169,366
G07-023-192	B030F10	1,808,288	1,970,649	162,362
G07-023-193	B077C03	1,834,807	1,970,654	135,848
G07-023-194	B078D07	1,839,351	1,983,125	143,775
G07-023-195	B041C08	1,843,516	1,943,679	100,164
G07-023-196	B074D04	1,847,090	1,995,846	148,757
G07-023-197	B096F05	1,847,123	1,971,846	124,724
G07-023-198	B093H08	1,847,125	1,935,826	88,702
G07-023-199	B052D11	1,854,106	2,024,685	170,580

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.