CDS Information : AO090038000287

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Aspergillus oryzae RIB40 (= NBRC 100959) chromosome6	Legend Jump
Contig Overview  Genome Proteome  Clone

Center position	SC020SC311SC038SC138	change
ID		change
Gene name		change

Organism	Aspergillus oryzae RIB40 (= NBRC 100959)
Replicon	chromosome6
Contig	SC038
Start / Stop / Direction	756,197 / 755,116 / -
Location	complement(join(755116..755345, 755402..755778, 756030..756069, 756158..756197))
Type	CDS
Length	687 bp (228 aa)
Intron	756157..756070, 756029..755779, 755401..755346

Product	elongation factor 1 beta/delta chain
Gene name
Functional category	Information storage and processing - [K] Transcription
EC number
Note
KEGG pathway
Sequence feature
References

Proteome results	2D-PAGE YPD_liquid (1) 2D-PAGE YPD_filter (1) 1D-PAGE-LC YPD_liquid 1D-PAGE-LC YPD_filter MDLC YPD_liquide MDLC YPD_filter Show sequence

BLASTP Database:UniProtKB:2010_04 show BLAST table	1 E=1e-129 Q2U2W9_ASPOR Elongation factor 1 beta/delta chain Alignment 2 E=1e-102 Q5BE68_EMENI Putative uncharacterized protein Alignment 3 E=1e-102 C8VT32_EMENI Eukaryotic translation elongation factor 1 subunit Eef1-beta, putative (AFU_orthologue; AFUA_1G11190) Alignment 4 E=1e-101 Q0D163_ASPTN Elongation factor 1-beta Alignment 5 E=7e-96 A1CQ00_ASPCL Eukaryotic translation elongation factor 1 subunit Eef1-beta, putative Alignment
HAMAP	No significant hit
InterPro	No significant hit
SignalP	No significant hit
TMHMM	No significant hit
SOSUI	No significant hit

size of protein	228 amino acids
molecular mass	25,228.89 Da
pI	4.18
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 12.3 (28aa) 7 (16aa) 5.7 (13aa) 3.9 (9aa) 3.5 (8aa) 2.2 (5aa) 5.7 (13aa) 1.8 (4aa) 5.3 (12aa) 5.7 (13aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 4.8 (11aa) 0 (0aa) 3.1 (7aa) 3.1 (7aa) 3.1 (7aa) 8.8 (20aa) 1.8 (4aa) 1.8 (4aa) 10.1 (23aa) 10.5 (24aa)

>AO090038000287 elongation factor 1 beta/delta chain
ATGGGTTTCACCGACTTCGTTTCTGAGGCTGGCCTCACTGTTGCCAACAACTGGTTCGCC
ACCAGAAGCTACGTTATTGGCGATGCTCCTTCCCAGGCCGATGTCGTGACCTTTAAGGCC
TTCTCTGGCGCCCCTGACGCTGAGAAGTACCCTCACGTTGCCCGTTGGTACAAGCACATC
GCTTCCTACGAGGCTGAGTTCGGCTCCCTCCCTGGTGATGCCTCTAAGGCCTACACCACC
TACGGCCCCGAGGCCACTGAGCTCCCCACCAACCCTAAGGACAAGCCCGCCGACGAGGAT
GACGACATGGACCTCTTCGGCAGTGACGACGAGGAGGAGGACCCTGAGGTTGCCAGGAAG
CATGCAGAGAATCTTGCTGCGTACAAGGCGAAGAAGGAGGCTAAGGGCCCTAAGCCCGCT
GCCAAGTCCATTGTCACTCTCGATGTCAAGCCTTGGGATGACGAGACCAACCTTGAGGAG
ATGGAGGCCAACGTCCGTGCAATCGAGAAGGACGGCCTTGTCTGGAGTGCCTCTAAGTGG
GTTCCTATTGGCTTCGGTATTAAGAAGCTCCAGATCAACCTTGTCGTTGAGGACGAGAAG
GTCTCCCTTGATGAGCTCCAAGAACAGATCCAGGAGGACGAGGACCACGTCCAGTCCACT
GATATCGCTGCTATGCAGAAGCTGTAA


>AO090038000287 elongation factor 1 beta/delta chain
MGFTDFVSEAGLTVANNWFATRSYVIGDAPSQADVVTFKAFSGAPDAEKYPHVARWYKHI
ASYEAEFGSLPGDASKAYTTYGPEATELPTNPKDKPADEDDDMDLFGSDDEEEDPEVARK
HAENLAAYKAKKEAKGPKPAAKSIVTLDVKPWDDETNLEEMEANVRAIEKDGLVWSASKW
VPIGFGIKKLQINLVVEDEKVSLDELQEQIQEDEDHVQSTDIAAMQKL


>AO090038000287 with intron
ATGGGTTTCACCGACTTCGTTTCTGAGGCTGGCCTCACTGGTGCGTTTCTTCTTTTTCTC
TCCTTTTCTCTCCTCAAGCCCTGCTCTTCATCGCTAGGGTGTTCTTGAAAGCTAATGTTA
CCCCTCAGTTGCCAACAACTGGTTCGCCACCAGAAGCTACGTTATTGGGTAAGTTCTTTT
GCATCATCTCTTCACTTGGAATTATATGCTTCCTATCCGATATGATGAAAAAAATTGGTC
CGTGTTTATGAGGCGGCTTAAGACCCCGCTGCAAGATTACACAACTTTGCGAGCAATCGC
TTTTCTGATAACCAGGAAAAAATTTTTCCCTCCTGCTATTCGTTGCCTGTCGTTATACTC
TCTTGAAGACCACTACAGTTGAATGTCTTGGAATTCCTTTTAACTGACTGGCCAACCAGC
GATGCTCCTTCCCAGGCCGATGTCGTGACCTTTAAGGCCTTCTCTGGCGCCCCTGACGCT
GAGAAGTACCCTCACGTTGCCCGTTGGTACAAGCACATCGCTTCCTACGAGGCTGAGTTC
GGCTCCCTCCCTGGTGATGCCTCTAAGGCCTACACCACCTACGGCCCCGAGGCCACTGAG
CTCCCCACCAACCCTAAGGACAAGCCCGCCGACGAGGATGACGACATGGACCTCTTCGGC
AGTGACGACGAGGAGGAGGACCCTGAGGTTGCCAGGAAGCATGCAGAGAATCTTGCTGCG
TACAAGGCGAAGAAGGAGGCTAAGGGCCCTAAGCCCGCTGCCAAGTCCATTGTCACTCTC
GATGTCAAGCCTTGGGGTATGTAGCCCGCGCTTGCTGCTCCCCGATGAAAACACATGCTA
ACCATTCTGCAGATGACGAGACCAACCTTGAGGAGATGGAGGCCAACGTCCGTGCAATCG
AGAAGGACGGCCTTGTCTGGAGTGCCTCTAAGTGGGTTCCTATTGGCTTCGGTATTAAGA
AGCTCCAGATCAACCTTGTCGTTGAGGACGAGAAGGTCTCCCTTGATGAGCTCCAAGAAC
AGATCCAGGAGGACGAGGACCACGTCCAGTCCACTGATATCGCTGCTATGCAGAAGCTGT
AA

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.