CDS Information : AO090103000331

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Aspergillus oryzae RIB40 (= NBRC 100959) chromosome8	Legend Jump
Contig Overview  Genome Proteome  Clone

Center position	SC103SC010	change
ID		change
Gene name		change

Organism	Aspergillus oryzae RIB40 (= NBRC 100959)
Replicon	chromosome8
Contig	SC103
Start / Stop / Direction	853,540 / 854,374 / +
Location	join(853540..853543, 853761..853926, 854077..854374)
Type	CDS
Length	468 bp (155 aa)
Intron	853544..853760, 853927..854076

Product	ribosomal protein S18
Gene name
Functional category	Information storage and processing - [J] Translation, ribosomal structure and biogenesis
EC number
Note
KEGG pathway
Sequence feature
References

Proteome results	1D-PAGE-LC YPD_liquid 1D-PAGE-LC YPD_filter MDLC YPD_liquide MDLC YPD_filter Show sequence

RefSeq	XP_001826904.1 : N-term changed (+537)
GI	169784886 : N-term changed (+537)
GeneID	5999026 : N-term changed (+537)

BLASTP Database:UniProtKB:2010_04 show BLAST table	1 E=8e-85 Q2TYA2_ASPOR Ribosomal protein S18 Alignment 2 E=8e-85 B8NXT0_ASPFN Ribosomal protein S13p/S18e Alignment 3 E=6e-82 A5AB20_ASPNC Similarity to cytoplasmic ribosomal protein of the small subunit S18 - Homo sapiens Alignment 4 E=1e-81 A1DP76_NEOFI Ribosomal protein S13p/S18e Alignment 5 E=2e-81 A1CUJ6_ASPCL Ribosomal protein S13p/S18e Alignment
HAMAP	No significant hit
InterPro	No significant hit
SignalP	No significant hit
TMHMM	No significant hit
SOSUI	No significant hit

size of protein	155 amino acids
molecular mass	17,943.68 Da
pI	11.11
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 1.9 (3aa) 7.7 (12aa) 10.3 (16aa) 4.5 (7aa) 1.3 (2aa) 1.3 (2aa) 1.3 (2aa) 1.9 (3aa) 8.4 (13aa) 5.2 (8aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 8.4 (13aa) 0.6 (1aa) 5.8 (9aa) 5.2 (8aa) 3.2 (5aa) 10.3 (16aa) 1.9 (3aa) 11 (17aa) 5.2 (8aa) 4.5 (7aa)

>AO090103000331 ribosomal protein S18
ATGTCGCTCGTGTCCGGCGAGAAGACGAACTTCCAGTACATCTTGCGTCTGCTCAACACC
AATGTTGACGGCAAGCAGAAGATTATGTACGCCTTGACCCAGATCAAGGGTGTCGGTCGC
CGTTACTCCAACTTGGTCTGCAAGAAGGCTGATGTTGACCTCAACAAGCGCGCCGGTGAG
CTTACCACCGAAGAGCTTGAGCGTGTCGTCACCATCCTCCAGAACCCTACCCAGTACAAG
ATCCCCACCTGGTTCCTGAACAGACAGCGCGACATCACCGATGGCAAGGACTCCCAGGTT
GTCTCCAACAACTTGGACAGCAAGATGCGTGAGGATCTCGAGCGCCTGAAGAAGATCCGC
TCCCACCGTGGTCTCCGTCACTACTGGGGTCTCCGTGTCCGTGGACAGCACACCAAGACC
ACCGGTCGCCGTGGCCGCACCGTCGGTGTCAGCAAGAAGAAGGGCTAA


>AO090103000331 ribosomal protein S18
MSLVSGEKTNFQYILRLLNTNVDGKQKIMYALTQIKGVGRRYSNLVCKKADVDLNKRAGE
LTTEELERVVTILQNPTQYKIPTWFLNRQRDITDGKDSQVVSNNLDSKMREDLERLKKIR
SHRGLRHYWGLRVRGQHTKTTGRRGRTVGVSKKKG


>AO090103000331 with intron
ATGTGTACGTTTTACTCCTGATCCCGAGCTGCTTTTGATTTGCAATATTCCTGGTGCCTT
GTCGTTTCGCCATTTTTCCCGGATGAAAGAGACGGGTTGCAACATTGCGTGGGAGTTATC
GACAGGAGATGGAAGGGGATGATGATAATGAAACGACGACGTTGTCGGAAATACAATGGA
TAGTACAGAAAAAAGGCTGACTGTGATTTTGTGACCTACAGCGCTCGTGTCCGGCGAGAA
GACGAACTTCCAGTACATCTTGCGTCTGCTCAACACCAATGTTGACGGCAAGCAGAAGAT
TATGTACGCCTTGACCCAGATCAAGGGTGTCGGTCGCCGTTACTCCAACTTGGTCTGCAA
GAAGGCTGATGTTGACCTCAACAAGCGGTACGTTCTCCGGTTCTTTCCATCATCAGAGAC
CTTGCGAGTGGGAGCAATGATAAAATGAAGAGGAGGAAAAAGAAGTGGTCACTATGATCA
AGTGAATGAAGACCGAAAACACAGGACAACATGGTTAACGTGATTCTCTCTCTGCAGCGC
CGGTGAGCTTACCACCGAAGAGCTTGAGCGTGTCGTCACCATCCTCCAGAACCCTACCCA
GTACAAGATCCCCACCTGGTTCCTGAACAGACAGCGCGACATCACCGATGGCAAGGACTC
CCAGGTTGTCTCCAACAACTTGGACAGCAAGATGCGTGAGGATCTCGAGCGCCTGAAGAA
GATCCGCTCCCACCGTGGTCTCCGTCACTACTGGGGTCTCCGTGTCCGTGGACAGCACAC
CAAGACCACCGGTCGCCGTGGCCGCACCGTCGGTGTCAGCAAGAAGAAGGGCTAA

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.