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CDS Information : AO090120000454
open/close allGenomic map
Information storage and processing [J] Translation, ribosomal structure and biogenesis [A] RNA processing and modification [K] Transcription [L] Replication, recombination and repair [B] Chromatin structure and dynamics Cellular processes and signaling [D] Cell cycle control, cell division, chromosome partitioning [O] Posttranslational modification, protein turnover, chaperones [Y] Nuclear structure [V] Defense mechanisms [T] Signal transduction mechanisms [M] Cell wall/membrane/envelope biogenesis [N] Cell motility [Z] Cytoskeleton [W] Extracellular structures [U] Intracellular trafficking, secretion, and vesicular transport Metabolism [C] Energy production and conversion [G] Carbohydrate transport and metabolism [E] Amino acid transport and metabolism [F] Nucleotide transport and metabolism [H] Coenzyme transport and metabolism [I] Lipid transport and metabolism [P] Inorganic ion transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism Poorly characterized [R] General function prediction only [S] Function unknown Bi-functional protein Unannotated
Location
Organism
Aspergillus oryzae RIB40 (= NBRC 100959 )
Replicon
chromosome5
Contig
SC113
Start / Stop / Direction
1,209,483 / 1,208,726 / -
Location
complement(join(1208726..1208845, 1208857..1208877, 1209068..1209151, 1209214..1209483))
Type
CDS
Length
495 bp (164 aa)
Intron 1209213..1209152, 1209067..1208878, 1208856..1208846
Annotation
Product
predicted protein
Gene name
Functional category
Unannotated
EC number
Note
KEGG pathway
Sequence feature
References
Proteome
Proteome results
2D-PAGE YPD_filter (1)
1D-PAGE-LC YPD_filter
Show sequence
Computational search results
BLASTPDatabase:UniProtKB:2010_04
HAMAP
No significant hit
InterPro
No significant hit
SignalP
Bacteria, Gram-negative Bacteria, Gram-positive Eukaryota
TMHMM
No significant hit
SOSUI
No significant hit
Calculated information (Amino acid sequence)
size of protein
164 amino acids
molecular mass
18,119.37 Da
pI
4.08
aa composition
Ala Val Leu Ile Phe Trp Pro Met Gly Ser
3.7 (6aa) 9.8 (16aa) 9.1 (15aa) 4.3 (7aa) 4.3 (7aa) 1.2 (2aa) 5.5 (9aa) 1.2 (2aa) 6.7 (11aa) 8.5 (14aa)
Thr Cys Asn Gln Tyr Lys His Arg Asp Glu
10.4 (17aa) 3 (5aa) 4.3 (7aa) 4.3 (7aa) 4.9 (8aa) 3 (5aa) 0 (0aa) 3.7 (6aa) 7.9 (13aa) 4.3 (7aa)
Sequence
>AO090120000454 predicted protein
ATGCGTGTCTCCCTAACCACCATCTTCTCCTCCCTGCTCTGTACCGTCTTGGTCTCATCC
CAGGACCTCGACACCTTCGACAAGAAATGTGTCGAGAATTATGGTGTTCCATCAGCAGAC
CCTGTTCCCGGCTCTTTCTCCAATGACGACTGTACGGATGTCGACGGGACACGTGGTGCC
ATACAAACTGCTGTAGACAAACTCGGTGATATGAATATTTACGCTGTCACCAAGCAGGTT
GTGAACGGTATTAACTATGTCATCTTTGTTACTCGCAACGAACGAACATATCGAGTTCCT
GTTTACCAAGATCTGACAGGAACCTATTCTCTTCAGGAAGAAGAAATCTGCTACCTCCCA
TTCGATGACAGTACTAGTGGCGCGATATCGTCCACCTTGAGACCACCTACCAATCTCTCT
TACGGCCAAGAAACATTCGGGCTACCACTTCAGGGCTGTGTTACAAAGGAAGCTCTCTTC
TGGCTGCCTTGGTAG
>AO090120000454 predicted protein
MRVSLTTIFSSLLCTVLVSSQDLDTFDKKCVENYGVPSADPVPGSFSNDDCTDVDGTRGA
IQTAVDKLGDMNIYAVTKQVVNGINYVIFVTRNERTYRVPVYQDLTGTYSLQEEEICYLP
FDDSTSGAISSTLRPPTNLSYGQETFGLPLQGCVTKEALFWLPW
>AO090120000454 with intron
ATGCGTGTCTCCCTAACCACCATCTTCTCCTCCCTGCTCTGTACCGTCTTGGTCTCATCC
CAGGACCTCGACACCTTCGACAAGAAATGTGTCGAGAATTATGGTGTTCCATCAGCAGAC
CCTGTTCCCGGCTCTTTCTCCAATGACGACTGTACGGATGTCGACGGGACACGTGGTGCC
ATACAAACTGCTGTAGACAAACTCGGTGATATGAATATTTACGCTGTCACCAAGCAGGTT
GTGAACGGTATTAACTATGTCATCTTTGTTGTGAGTAATGGTCCCAACTATATGGGCAGG
GTATACCGGCGATGCTGATACAGAACAAATAG ACTCGCAACGAACGAACATATCGAGTTC
CTGTTTACCAAGATCTGACAGGAACCTATTCTCTTCAGGAAGAAGAAATCTGCTACGTGA
GTGATAAGCTACTAGATCAATTGACATCCCTACTATAAATCAGTGCTGACAGAGATGTTA
ATAAATAGACCGTGAGTGATGATAGTTAGTAAGATTCATGAGTCTAATGTACTTACCAAG
AAGATAGGACGGTCCGCCGCCTGCACAAATCAAGCCGTTGGATTGCGGTTATTAATCCCT
TCAAAG CTCCCATTCGATGACAGTACTGTATGTGGAAG AGTGGCGCGATATCGTCCACCT
TGAGACCACCTACCAATCTCTCTTACGGCCAAGAAACATTCGGGCTACCACTTCAGGGCT
GTGTTACAAAGGAAGCTCTCTTCTGGCTGCCTTGGTAG
Covered clones
NBRC No.
clone name
start
stop
length(bp)
G07-113-126
B020E10
1,142,013
1,248,739
106,727
G07-113-127
B002A03
1,154,848
1,282,826
127,979
G07-113-128
B018B11
1,155,832
1,344,273
188,442
G07-113-129
B030F05
1,166,684
1,342,629
175,946
G07-113-130
B041D09
1,169,007
1,230,287
61,281
G07-113-131
B073A07
1,185,157
1,260,141
74,985
G07-113-132
B096G08
1,185,194
1,248,745
63,552
G07-113-133
B025B11
1,189,869
1,271,797
81,929
G07-113-134
B006A08
1,191,591
1,248,744
57,154
Distribution of Our Microbial Genomic DNA clones
We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at
http://www.nbrc.nite.go.jp/e/mdna-e.html .