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CDS Information : AO090120000463
open/close allGenomic map
Information storage and processing [J] Translation, ribosomal structure and biogenesis [A] RNA processing and modification [K] Transcription [L] Replication, recombination and repair [B] Chromatin structure and dynamics Cellular processes and signaling [D] Cell cycle control, cell division, chromosome partitioning [O] Posttranslational modification, protein turnover, chaperones [Y] Nuclear structure [V] Defense mechanisms [T] Signal transduction mechanisms [M] Cell wall/membrane/envelope biogenesis [N] Cell motility [Z] Cytoskeleton [W] Extracellular structures [U] Intracellular trafficking, secretion, and vesicular transport Metabolism [C] Energy production and conversion [G] Carbohydrate transport and metabolism [E] Amino acid transport and metabolism [F] Nucleotide transport and metabolism [H] Coenzyme transport and metabolism [I] Lipid transport and metabolism [P] Inorganic ion transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism Poorly characterized [R] General function prediction only [S] Function unknown Bi-functional protein Unannotated
Location
Organism
Aspergillus oryzae RIB40 (= NBRC 100959 )
Replicon
chromosome5
Contig
SC113
Start / Stop / Direction
1,240,175 / 1,238,207 / -
Location
complement(join(1238207..1238866, 1238920..1239841, 1239907..1240175))
Type
CDS
Length
1,851 bp (616 aa)
Intron 1239906..1239842, 1238919..1238867
Annotation
Product
predicted protein
Gene name
Functional category
Unannotated
EC number
Note
KEGG pathway
Sequence feature
References
Computational search results
BLASTPDatabase:UniProtKB:2010_04
HAMAP
No significant hit
InterPro
No significant hit
SignalP
No significant hit
TMHMM
SOSUI
Calculated information (Amino acid sequence)
size of protein
616 amino acids
molecular mass
67,456.76 Da
pI
5.53
aa composition
Ala Val Leu Ile Phe Trp Pro Met Gly Ser
8.6 (53aa) 7.1 (44aa) 10.6 (65aa) 4.9 (30aa) 5.4 (33aa) 2.4 (15aa) 4.7 (29aa) 1.3 (8aa) 9.6 (59aa) 9.1 (56aa)
Thr Cys Asn Gln Tyr Lys His Arg Asp Glu
6 (37aa) 1.8 (11aa) 2.8 (17aa) 1.3 (8aa) 3.6 (22aa) 2.6 (16aa) 1.6 (10aa) 6.2 (38aa) 4.4 (27aa) 6.2 (38aa)
Sequence
>AO090120000463 predicted protein
ATGCCCCCATCCAATGGCCGAGACTCCTCTATTGATAAACGAGACTTTGACACAAACCGT
CCATTACTGGCTATCTACGACTCTGGTGGAGACACAGAGTGTAGAGATCTACACTCACGA
CCGGAATCCAGGATCTCCGCACGCCGTTATAGTGACGGTGAAGACGGTCTCTTGAATGAT
GTTGTTGAAGAAATAGTCGAAAGGGATCGCCGCAGGCTGGCTAAAGAAGTGGTACGGATA
TGCAGCTTTGCCTTGGGGATAGTAACCTGCCTAGGAGCTGGCAGCATCACTGCGTTCTCC
CTTTACGGCCCCTTGTTTCTCACCCGTCTTCATTACACTCAACTCCGAGTTAACGCTGTA
TCGATTGCTGCTGGTGTGTCGATGTATCTACCCGTTTCAATCTTTGGATACCTCTGTGAC
CGGTATACCCCTTCGCCCCTGGCTTTGTTTTCTGGCACGGTCTTCGGAATAGGCTACCTT
TTAGCTGCAATCGTGTACAAGAACGGTCCACCTCCGGATGCAGGTGGAAATGGATACCCT
TTTTGGGTGATGGTAGTGGCTTTCGTGTGCGTCGGGACCGCCACAAGCTGCATGTACCTG
GCCGCCGTCACGACTTGCGCCAAAAACTTTGGCAGGGGCAAGCACAAAGGAATTATGCTT
GCCATACCTATAGCTGCTTTTGGCCTTAGTGGTATGTGGCAGAGTCAAGTGGGTACTTAC
CTTTTGTATGAACGGTTAGAAGATGGCAGCCATGGCGATGTAGACGTCTTCCGATACTTC
ATTTTCCTTGCCGCACTGCTTTTTAGTATAGGTGTAATTGGGACTTTTGGATTACGAATT
GTGGATGAGGATGAGGAGAAATATATTGATGAGGCAGTCGAAGAACTTGAGAGGAGTGGC
CTGTTGGAAGAGAGCGAGTTCTTCCGGTCGAGAAGCGAGGTTAGAGCTGCGTATGGAACA
TTCTCGCAGTCTGACAATGCAGACGACGAAGAACGAACGCTATCACTGACCCAAACTGAA
GAAGAGAGGGAAGCAGCAAGGCTTGAGAAAGAGAGAGAGGAGGAGGAACGTAGGAAGAAA
AACTGGCTATTGAATTGGGAAACAAAGGTGTTCCTTAAGGATCATACGATGTGGTGGCTT
GCCTTGGGCTTCTTCTTGGTTACTGGACCAGGAGAAGCATACATCAACAACCTGGGTACT
GTGGTCGGAGCTCTGGGCCCAGAGTCAAGCTCCTCTAATGCTCCTTCTCCTGCCGGCAAA
CCATCTACACATGTGACAACTATTGCGCTCACTTCAACAATTGCCCGACTCCTCACAGGA
TCCCTGTCGGACTTCTTCGCCCCCCCGGCAACGCATCTTTTCCCAACTAACTCAGAAGCC
GTGCGTCCCAGCTCACCGTCAGGCTCAAAGCGAGTTACGTTATCTCGATTAACATTCCTC
CTCCCATCCGCTGTTCTCCTCTCACTTGGCTATCTTCTCCTCGCATCTCCCTTTCCGGTC
CAGCACCCGGAATTGTCCCATATAACCACAGGCCTTATCGGCTTCGGTTACGGGAGCGCG
TTCTCCCTCTGCCCCATCATCATCTCCGTTGTCTGGGGTGTTGAGAACTTCGGCACGAAC
TGGGGTATCGTTGCCATGTTCCCGGCAGCAGGCGCTGCACTGTGGGGCCTCATCTACTCC
CGCTTTTACCAAGACGCCACAGATGGAGGCAATGGCTCAACGGACGGCCAGTGCCACGGC
TGGAAATGCTTTGGCTACTGGGCCTTGGGATGTGCGCTGAGCGTATGGGTGGCTATTGCC
GTATGGAGTGTCGCTTGGAGATCTTGGAAACGCAGGGGCGTTTCTGTTTGA
>AO090120000463 predicted protein
MPPSNGRDSSIDKRDFDTNRPLLAIYDSGGDTECRDLHSRPESRISARRYSDGEDGLLND
VVEEIVERDRRRLAKEVVRICSFALGIVTCLGAGSITAFSLYGPLFLTRLHYTQLRVNAV
SIAAGVSMYLPVSIFGYLCDRYTPSPLALFSGTVFGIGYLLAAIVYKNGPPPDAGGNGYP
FWVMVVAFVCVGTATSCMYLAAVTTCAKNFGRGKHKGIMLAIPIAAFGLSGMWQSQVGTY
LLYERLEDGSHGDVDVFRYFIFLAALLFSIGVIGTFGLRIVDEDEEKYIDEAVEELERSG
LLEESEFFRSRSEVRAAYGTFSQSDNADDEERTLSLTQTEEEREAARLEKEREEEERRKK
NWLLNWETKVFLKDHTMWWLALGFFLVTGPGEAYINNLGTVVGALGPESSSSNAPSPAGK
PSTHVTTIALTSTIARLLTGSLSDFFAPPATHLFPTNSEAVRPSSPSGSKRVTLSRLTFL
LPSAVLLSLGYLLLASPFPVQHPELSHITTGLIGFGYGSAFSLCPIIISVVWGVENFGTN
WGIVAMFPAAGAALWGLIYSRFYQDATDGGNGSTDGQCHGWKCFGYWALGCALSVWVAIA
VWSVAWRSWKRRGVSV
>AO090120000463 with intron
ATGCCCCCATCCAATGGCCGAGACTCCTCTATTGATAAACGAGACTTTGACACAAACCGT
CCATTACTGGCTATCTACGACTCTGGTGGAGACACAGAGTGTAGAGATCTACACTCACGA
CCGGAATCCAGGATCTCCGCACGCCGTTATAGTGACGGTGAAGACGGTCTCTTGAATGAT
GTTGTTGAAGAAATAGTCGAAAGGGATCGCCGCAGGCTGGCTAAAGAAGTGGTACGGATA
TGCAGCTTTGCCTTGGGGATAGTAACCTGGTGAGTCCGATATCAAGATCTCGCTACATCC
CGCCCTAACTGTCCTTGCTAACAAAATGATGCAG CCTAGGAGCTGGCAGCATCACTGCGT
TCTCCCTTTACGGCCCCTTGTTTCTCACCCGTCTTCATTACACTCAACTCCGAGTTAACG
CTGTATCGATTGCTGCTGGTGTGTCGATGTATCTACCCGTTTCAATCTTTGGATACCTCT
GTGACCGGTATACCCCTTCGCCCCTGGCTTTGTTTTCTGGCACGGTCTTCGGAATAGGCT
ACCTTTTAGCTGCAATCGTGTACAAGAACGGTCCACCTCCGGATGCAGGTGGAAATGGAT
ACCCTTTTTGGGTGATGGTAGTGGCTTTCGTGTGCGTCGGGACCGCCACAAGCTGCATGT
ACCTGGCCGCCGTCACGACTTGCGCCAAAAACTTTGGCAGGGGCAAGCACAAAGGAATTA
TGCTTGCCATACCTATAGCTGCTTTTGGCCTTAGTGGTATGTGGCAGAGTCAAGTGGGTA
CTTACCTTTTGTATGAACGGTTAGAAGATGGCAGCCATGGCGATGTAGACGTCTTCCGAT
ACTTCATTTTCCTTGCCGCACTGCTTTTTAGTATAGGTGTAATTGGGACTTTTGGATTAC
GAATTGTGGATGAGGATGAGGAGAAATATATTGATGAGGCAGTCGAAGAACTTGAGAGGA
GTGGCCTGTTGGAAGAGAGCGAGTTCTTCCGGTCGAGAAGCGAGGTTAGAGCTGCGTATG
GAACATTCTCGCAGTCTGACAATGCAGACGACGAAGAACGAACGCTATCACTGACCCAAA
CTGAAGAAGAGAGGGAAGCAGCAAGGCTTGAGAAAGAGAGAGAGGAGGAGGAACGTAGGA
AGAAAAACTGGCTATTGAATTGGGAAACAAAGGTGTTCCTTAAGGATCATACGATGTGGT
GGCTTGCCTTGGGCTTCTTCTTGGTTACTGGACCAGGAGAAGCATACATCAACAACGTAA
GTGACATTTCACACATTGCCATTATACAATGATTTGCTGACCTTCCTAG CTGGGTACTGT
GGTCGGAGCTCTGGGCCCAGAGTCAAGCTCCTCTAATGCTCCTTCTCCTGCCGGCAAACC
ATCTACACATGTGACAACTATTGCGCTCACTTCAACAATTGCCCGACTCCTCACAGGATC
CCTGTCGGACTTCTTCGCCCCCCCGGCAACGCATCTTTTCCCAACTAACTCAGAAGCCGT
GCGTCCCAGCTCACCGTCAGGCTCAAAGCGAGTTACGTTATCTCGATTAACATTCCTCCT
CCCATCCGCTGTTCTCCTCTCACTTGGCTATCTTCTCCTCGCATCTCCCTTTCCGGTCCA
GCACCCGGAATTGTCCCATATAACCACAGGCCTTATCGGCTTCGGTTACGGGAGCGCGTT
CTCCCTCTGCCCCATCATCATCTCCGTTGTCTGGGGTGTTGAGAACTTCGGCACGAACTG
GGGTATCGTTGCCATGTTCCCGGCAGCAGGCGCTGCACTGTGGGGCCTCATCTACTCCCG
CTTTTACCAAGACGCCACAGATGGAGGCAATGGCTCAACGGACGGCCAGTGCCACGGCTG
GAAATGCTTTGGCTACTGGGCCTTGGGATGTGCGCTGAGCGTATGGGTGGCTATTGCCGT
ATGGAGTGTCGCTTGGAGATCTTGGAAACGCAGGGGCGTTTCTGTTTGA
Covered clones
NBRC No.
clone name
start
stop
length(bp)
G07-113-126
B020E10
1,142,013
1,248,739
106,727
G07-113-127
B002A03
1,154,848
1,282,826
127,979
G07-113-128
B018B11
1,155,832
1,344,273
188,442
G07-113-129
B030F05
1,166,684
1,342,629
175,946
G07-113-131
B073A07
1,185,157
1,260,141
74,985
G07-113-132
B096G08
1,185,194
1,248,745
63,552
G07-113-133
B025B11
1,189,869
1,271,797
81,929
G07-113-134
B006A08
1,191,591
1,248,744
57,154
G07-113-135
B084C09
1,230,266
1,282,827
52,562
Distribution of Our Microbial Genomic DNA clones
We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at
http://www.nbrc.nite.go.jp/e/mdna-e.html .