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CDS Information : AO090120000463

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close this sectionGenomic map

Display Clone

Aspergillus oryzae RIB40 (= NBRC 100959) chromosome5

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Contig
Overview 
Genome
Proteome 
Clone

close this sectionLocation

Organism Aspergillus oryzae RIB40 (= NBRC 100959)
Replicon chromosome5
Contig SC113
Start / Stop / Direction 1,240,175 / 1,238,207 / -
Location complement(join(1238207..1238866, 1238920..1239841, 1239907..1240175))
Type CDS
Length 1,851 bp (616 aa)
Intron1239906..1239842, 1238919..1238867

close this sectionAnnotation

Product predicted protein
Gene name
Functional category Unannotated
EC number
Note
KEGG pathway
Sequence feature
References

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=0Q2U5X9_ASPORPredicted proteinAlignment
2E=0B8NLY1_ASPFNMFS monocarboxylic acid transporter, putativeAlignment
3E=0A1CBQ6_ASPCLMFS monocarboxylic acid transporter, putativeAlignment
4E=0A2R3K0_ASPNCSimilarity to hypothetical protein B15I20.30 - Neurospora crassaAlignment
5E=0MCH1_ASPFUProbable transporter mch1Alignment
HAMAP No significant hit
InterPro No significant hit
SignalP No significant hit
TMHMM
 [80-102]  Transmembrane (i-o) [117-139]  Transmembrane (o-i) [144-166]  Transmembrane (i-o) [181-203]  Transmembrane (o-i) [216-233]  Transmembrane (i-o) [256-278]  Transmembrane (o-i) [477-499]  Transmembrane (i-o) [512-534]  Transmembrane (o-i) [541-563]  Transmembrane (i-o) [583-605]  Transmembrane (o-i)
Transmembrane 10   
SOSUI
 [79-101]  Transmembrane [117-139]  Transmembrane [145-167]  Transmembrane [183-205]  Transmembrane [216-238]  Transmembrane [257-279]  Transmembrane [476-498]  Transmembrane [510-532]  Transmembrane [540-562]  Transmembrane [585-607]  Transmembrane
Transmembrane 10   

close this sectionCalculated information (Amino acid sequence)

size of protein 616 amino acids
molecular mass 67,456.76 Da
pI 5.53
aa composition
AlaValLeuIlePheTrpProMetGlySer
8.6
(53aa)
7.1
(44aa)
10.6
(65aa)
4.9
(30aa)
5.4
(33aa)
2.4
(15aa)
4.7
(29aa)
1.3
(8aa)
9.6
(59aa)
9.1
(56aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
6
(37aa)
1.8
(11aa)
2.8
(17aa)
1.3
(8aa)
3.6
(22aa)
2.6
(16aa)
1.6
(10aa)
6.2
(38aa)
4.4
(27aa)
6.2
(38aa)

open this sectionSequence

close this sectionCovered clones

NBRC No. clone name start stop length(bp)
G07-113-126 B020E10 1,142,013 1,248,739 106,727
G07-113-127 B002A03 1,154,848 1,282,826 127,979
G07-113-128 B018B11 1,155,832 1,344,273 188,442
G07-113-129 B030F05 1,166,684 1,342,629 175,946
G07-113-131 B073A07 1,185,157 1,260,141 74,985
G07-113-132 B096G08 1,185,194 1,248,745 63,552
G07-113-133 B025B11 1,189,869 1,271,797 81,929
G07-113-134 B006A08 1,191,591 1,248,744 57,154
G07-113-135 B084C09 1,230,266 1,282,827 52,562

close this sectionDistribution of Our Microbial Genomic DNA clones

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.