CDS Information : APA32_00200

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Acetobacter pasteurianus IFO 3283-32 (= NBRC 105190) chromosome	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Acetobacter pasteurianus IFO 3283-32 (= NBRC 105190)
Replicon	chromosome
Start / Stop / Direction	18,318 / 19,772 / +
Location	18318..19772
Type	CDS
Length	1,455 bp (484 aa)

Product	Exodeoxyribonuclease VII large subunit
Gene name
Functional category	Information Pathways - Nuclease
EC number
Note
KEGG pathway
Sequence feature
References

BLASTP Database:UniProtKB:15.0 show BLAST table	1 E=1e-179 B5ZHW7_GLUDA Exodeoxyribonuclease VII, large subunit Alignment 2 E=1e-179 A9H4N9_GLUDA Putative exodeoxyribonuclease VII large subunit Alignment 3 E=1e-155 Q5FQ78_GLUOX Exodeoxyribonuclease 7 large subunit Alignment 4 E=1e-150 Q0BPQ6_GRABC Exodeoxyribonuclease 7 large subunit Alignment 5 E=1e-146 A5FY60_ACICJ Exodeoxyribonuclease 7 large subunit Alignment
HAMAP	No significant hit
InterPro Database:interpro:18.0	IPR003753 Exonuclease VII, large subunit (Family) TIGR00237   xseA: exodeoxyribonuclease VII, large subun PF02601   Exonuc_VII_L IPR004365 Nucleic acid binding, OB-fold, tRNA/helicase-type (Domain) PF01336   tRNA_anti IPR020579 Exonuclease VII, large subunit, C-terminal (Domain) PF02601   Exonuc_VII_L IPR020579 Exonuclease VII, large subunit, C-terminal (Region) PF02601   Exonuc_VII_L
SignalP	No significant hit
TMHMM	No significant hit
SOSUI	No significant hit

size of protein	484 amino acids
molecular mass	52,309.22 Da
pI	10.15
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 13.4 (65aa) 8.3 (40aa) 11.2 (54aa) 5.2 (25aa) 2.3 (11aa) 0.4 (2aa) 5.6 (27aa) 1.9 (9aa) 8.1 (39aa) 5.4 (26aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 5.6 (27aa) 0.6 (3aa) 1.2 (6aa) 3.9 (19aa) 1.2 (6aa) 1.9 (9aa) 1.2 (6aa) 11.4 (55aa) 4.8 (23aa) 6.6 (32aa)

>APA32_00200 Exodeoxyribonuclease VII large subunit
ATGACCGAACAGTTTGACATTCCATCGGCCAGCAACAATGTGCCGGAATTTACCGTTTCA
GAAATTTCGGGTGCTATCCGGCGCACGCTGGAGGGCACATTCAGCCGCGTGCGCGTGCGT
GGCGAAATTACGGAACTTAAACGCTACCCCTCCGGCCATGTGTATTTTTCGCTCAAGGAT
GAGCGGGGCAAAATTTCTGGTGTGGTATGGCGTGGTTCGGTTTCTCGCCTTGGTCTGGCG
CCAGAAAACGGGGTGGAGATTATCGCCACCGGTAAGATCTCGGCTTATGGTGAGCGTTCC
AGCTATCAGCTTGTTGTAGAGCGGATGGAATATGCGGGCGAAGGCGCTTTGCTGGCCCGT
ATTGAACGCTTACGCATCAGGCTGGCGGAAGAAGGGCTGTTTGATACAGCTTGCAAAAAA
GCCATTCCGCTTTTGCCGCGCGTGATCGGGGTGGTGACATCACCTCAAGGTGCTGTGCTG
CATGATATCTGCACAACCTTGCAAAGGCGTTTCCCGCGGCCGGTGATTGTCTGGCCCGTG
CCTGTGCAGGGTGAAGGGGCAGCAGCCCGTATTGCTGCGGCGATTGATGGTTTTTCCCAG
CTTGATGGCCAAGGCGCAGTGCCCCGGCCAGATGTGCTGATTGTGGCGCGCGGTGGTGGA
TCACTCGAAGACCTGATGGCTTTTAATGATGAAGCCGTGGTAAGAGCTGCTGCTGCATGC
ACAATCCCGCTGATTTCTGCCGTAGGGCACGAAACAGATACAACCCTGATTGATTTTGCA
TCAGACAGGCGCGCGCCAACACCCACAGCCGCGGCAGAAATGGCCGTGCCAGTGCGCACG
GAACTTCTGGCAGATATAGAACATCGCAACGCGCGTGCACTGGGTGCGCTTTCTCGCCTG
CTACAAACCGCACGCTTAAGGCTGGATCGTGCATCTTCTGCCATGCCGGATCTGCCAAGC
CTGTTGCAGACAGCACGAATGCAGTTGGATGACAGAGGCCGTAGATTAGATGTTGCCCTG
CCCGCTTTGGTGCAGCGGCGGAAAGCCGATCTGGTTGCTATTGAACGCCATATGCCTGCG
GTTGAAACCTTATTGGCAGGGCGGCGCACCCGTTTGGCGGTGCTGGCAAACATGTTGCAG
GCCAGTATGGCGCATACTTTCCAAAAGCAGGATGCCCGGTTGGGTCGTCTACGGATATCT
CCGGCCCCATTGCAGGCATTGGTGCGGGAAAGACGGACAGCTCTTGCAGGTATTGCCGGG
CAGTTGGAAGCTGTTTCTCCCCGCGCTGTGTTGGCCCGTGGGTATGCACTTGTTACGGCG
GAGGGGCGGCCAGTTACCAGTGCTGAACAATTACGTGATGGCGAACGTGTAGAACTAACA
TTCGGTGATGGTGCCCGCCCGGCTGTGATTGGCGATGGCACGCGCCAACCCAAGCAAGGT
GTGCTGGAACTGTAA


>APA32_00200 Exodeoxyribonuclease VII large subunit
MTEQFDIPSASNNVPEFTVSEISGAIRRTLEGTFSRVRVRGEITELKRYPSGHVYFSLKD
ERGKISGVVWRGSVSRLGLAPENGVEIIATGKISAYGERSSYQLVVERMEYAGEGALLAR
IERLRIRLAEEGLFDTACKKAIPLLPRVIGVVTSPQGAVLHDICTTLQRRFPRPVIVWPV
PVQGEGAAARIAAAIDGFSQLDGQGAVPRPDVLIVARGGGSLEDLMAFNDEAVVRAAAAC
TIPLISAVGHETDTTLIDFASDRRAPTPTAAAEMAVPVRTELLADIEHRNARALGALSRL
LQTARLRLDRASSAMPDLPSLLQTARMQLDDRGRRLDVALPALVQRRKADLVAIERHMPA
VETLLAGRRTRLAVLANMLQASMAHTFQKQDARLGRLRISPAPLQALVRERRTALAGIAG
QLEAVSPRAVLARGYALVTAEGRPVTSAEQLRDGERVELTFGDGARPAVIGDGTRQPKQG
VLEL

NBRC No.	clone name	start	stop	length(bp)
G15-001-001	AS1FE12L00003B06	2,292	36,498	34,207
G15-001-142	AS1FE12L00002C05	2,892,021	22,460	35,082

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.