CDS Information : APA32_10210

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Acetobacter pasteurianus IFO 3283-32 (= NBRC 105190) chromosome	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Acetobacter pasteurianus IFO 3283-32 (= NBRC 105190)
Replicon	chromosome
Start / Stop / Direction	1,069,143 / 1,070,993 / +
Location	1069143..1070993
Type	CDS
Length	1,851 bp (616 aa)

Product	Two component sensor histidine kinase
Gene name
Functional category	Information Pathways - Transcription
EC number
Note	Chromosome variant locus=Gap14 no-insertion Transposon insertion were observed in the IFO 3283-22, -26 and -03 using nucleotide sequence in this region (GCTAGT) as target sequence.
KEGG pathway
Sequence feature	425..426 (a.a.) OTHER_PEP
References

BLASTP Database:UniProtKB:15.0 show BLAST table	1 E=1e-114 B5ZJ20_GLUDA Response regulator receiver sensor signal transduction histidine kinase Alignment 2 E=1e-113 A9H1A7_GLUDA Sensor protein Alignment 3 E=1e-106 Q5FU93_GLUOX Sensor protein Alignment 4 E=1e-103 B8IMV6_METNO Response regulator receiver sensor signal transduction histidine kinase Alignment 5 E=1e-101 B0UFG3_METS4 Sensor protein Alignment
HAMAP	No significant hit
InterPro Database:interpro:18.0	IPR001789 Response regulator receiver (Domain) PS50110   RESPONSE_REGULATORY PF00072   Response_reg PD000039   Q7X4X1_RHOCE_Q7X4X1; IPR003594 ATP-binding region, ATPase-like (Domain) SM00387   no description G3DSA:3.30.565.10   no description PF02518   HATPase_c SSF55874   ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase IPR003661 Histidine kinase A, N-terminal (Domain) SM00388   no description PF00512   HisKA IPR005467 Histidine kinase (Domain) PS50109   HIS_KIN IPR009082 Histidine kinase, homodimeric (Domain) SSF47384   Homodimeric domain of signal transducing histidine kinase IPR011006 CheY-like (Domain) SSF52172   CheY-like
SignalP	No significant hit
TMHMM	No significant hit
SOSUI	No significant hit

size of protein	616 amino acids
molecular mass	66,834.81 Da
pI	5.35
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 12.8 (79aa) 8.3 (51aa) 12.2 (75aa) 4.2 (26aa) 3.4 (21aa) 0.5 (3aa) 4.5 (28aa) 2.4 (15aa) 7.1 (44aa) 5.4 (33aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 3.7 (23aa) 1.9 (12aa) 2.8 (17aa) 4.1 (25aa) 0.8 (5aa) 2.8 (17aa) 1.5 (9aa) 8.4 (52aa) 6 (37aa) 7.1 (44aa)

>APA32_10210 Two component sensor histidine kinase
ATGTCAGCGGATTTTATGCCGGTGGCCGGTAAAATTATGGATTTTCTTTCCTGCTCCATC
CTGTTTGCCGGGGTGGACGCGGCTTGGCAGGCGCACCTTGAAACCTTGCTGCAGGCGCGT
GGGTTGCGTGTAAAAAGCGTGGCGGATGGTCGTTCCGCCTTTGCCGGGTTTGATGAGGAT
TTGCCTGATCTTCTGGTCGTGCCCGCACGTTTGCCAGATATGCCAGCAACCCAGCTTTGC
CAGCGTTTGCGGTTAAACGCAGCCACGCGGGGTATTCCGGTTGTGGTGTTGTTGCCAGAG
GCCAACAGTAGGCAGGAAGCCGAAATTCTGGAACGCGGGGCAGATTGCTGCTTCAGCATG
GCGGATAATCCGCTTTTGCTGGTTTTCCGTATTTGTGCGCTGCTGCGTGAATATGATGAA
GACCTTGCCGGGCGTGAGGGCGTGGTGTTTCGCCAACCTCGTATTGTAATCATGACAGCA
CCGGGCGGTGTGTTATGGGCGTGGTCCGATAGGCAGAAACCCGCAGATTTTGAACCGATC
AGAGGCGGTCAGCCTTATCTGGTAGAGCTTCTGCAACAGAATGGGGAAGATGCCCTGCTG
GTGGAAGACCCGGAAAAGCTGGACCTTTCCGGTATTGCCAGCAGCCGTGCCTGCCCGGAT
TGTGTGGTGGTGGATCTGGCTTGCCCGGCATTTGATGGCCTGGCACTTGCCCGCACCATA
GCGGCTTTTCGCAGGCGCAGCCGCCAGTGCACACGCATTATGGGCATGGTGGAACACGGT
GGCCTTTCTGGTGAACAGGTGGCACGCGCATTTCATGCCGGGATAGATGATCTGCTGGAT
GCCGATACACCCGTAGATTTGCTGGTAAGCCGTATTGGCAGCCTTGTGCGGCGCAAGACA
TTGCAAGATGAAGCCCGACGCGAGGAAGCACATATAGAAAGCGCCCGTGCACGTATGGCG
CTGGCCGATGCTCTGCGCCGCGTGAATGCAGATCTGGCGGCTGCTAACCGCAAATTGATA
GAGGCGCAGGCCAAACTGGTGCAGTCCGCCAAAATGGCATCGTTAGGGGAGTTGGCGGCC
GGTATTGCGCACGAATTCAACAACCCGCTGGCGTTTGTTCTGGCGCATGAAAATACGGTT
AAGCGCAGTATGGTCAAGGCGCTGCATGCTGTCAGATCGCAAGATCTGGTTACGGCGGAA
ACCGCATTGCAAAAAGGGAGTGAGCGCCTTTCAGCCTCCCTTATCGGTCTTTCACGCATG
CGGGATCTGGTGGCTAGTCTGCGCCGTTTTTCCCGGCTGGAGGAAGGGGAGTTCCGCCGT
CTGGATGTGCCCGAAGCCATAGGTATGGTGCTTACATTACTTGCCCCCAAACTGGGGCAG
GATATTGAAGTCACCTGCAAGCTGGAGGCCCCGCCGGAGCTGGTGTGTCAGGCGGCGCTG
GTCAATCAGGTGGTCATGAATATTGTAAGCAATGCCGCAGATGCCATTTTGGACAAACGG
CGCGAGACGATTCAGAACTCCGAACCCATGCTTTCACACGCAGATCGTATCCTTATCACT
TCGTTTTTGGAGCAAGCCGAAAACGGAAAAGGTGAAGAATACGTGATCCAGATAAGCGAT
ACCGGGCCGGGCGTGCCCAAAGAGCTGCAGGAACGTGTTTTTGAACCGTTTTTTACCACA
AAACCTGTAGGGTCTGGTACGGGGCTTGGGCTGGCCACCGCATACGGTGTTGTGCAGGCC
CACGGCGGCAATGTTGTTGTAACCAATGCAAGCACGTTGGGGGGCGCCTGTTTCACCCTC
CGCGTGCCATACAGAGCAGGAGAGGAGAGGCGCGGTGATAACGTTGCCTGA


>APA32_10210 Two component sensor histidine kinase
MSADFMPVAGKIMDFLSCSILFAGVDAAWQAHLETLLQARGLRVKSVADGRSAFAGFDED
LPDLLVVPARLPDMPATQLCQRLRLNAATRGIPVVVLLPEANSRQEAEILERGADCCFSM
ADNPLLLVFRICALLREYDEDLAGREGVVFRQPRIVIMTAPGGVLWAWSDRQKPADFEPI
RGGQPYLVELLQQNGEDALLVEDPEKLDLSGIASSRACPDCVVVDLACPAFDGLALARTI
AAFRRRSRQCTRIMGMVEHGGLSGEQVARAFHAGIDDLLDADTPVDLLVSRIGSLVRRKT
LQDEARREEAHIESARARMALADALRRVNADLAAANRKLIEAQAKLVQSAKMASLGELAA
GIAHEFNNPLAFVLAHENTVKRSMVKALHAVRSQDLVTAETALQKGSERLSASLIGLSRM
RDLVASLRRFSRLEEGEFRRLDVPEAIGMVLTLLAPKLGQDIEVTCKLEAPPELVCQAAL
VNQVVMNIVSNAADAILDKRRETIQNSEPMLSHADRILITSFLEQAENGKGEEYVIQISD
TGPGVPKELQERVFEPFFTTKPVGSGTGLGLATAYGVVQAHGGNVVVTNASTLGGACFTL
RVPYRAGEERRGDNVA

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.