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CDS Information : APA32_12550

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close this sectionGenomic map

Display Clone

Acetobacter pasteurianus IFO 3283-32 (= NBRC 105190) chromosome

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Overview 
Genome
Clone

close this sectionLocation

Organism Acetobacter pasteurianus IFO 3283-32 (= NBRC 105190)
Replicon chromosome
Start / Stop / Direction 1,315,471 / 1,313,972 / -
Location complement(1313972..1315471)
Type CDS
Length 1,500 bp (499 aa)

close this sectionAnnotation

Product Glycerol kinase
Gene name
Functional category Metabolic
EC number
Note Chromosome variant locus=SNP02 no-mutation
His(CAC) at 48 a.a. was mutated to Gln(CAA) in the IFO 3283-12, -07 and -01 strains.
KEGG pathway map:00561 KO:K00864
Sequence feature

48 (a.a.)OTHER_PEP
References

close this sectionComputational search results

BLASTP
Database:UniProtKB:15.0
1E=0A9HHY3_GLUDAGlycerol kinase
Putative glycerol kinase		Alignment
2E=0GLPK_GLUOXGlycerol kinase
ATP:glycerol 3-phosphotransferase
Glycerokinase		Alignment
3E=1e-175GLPK_RHOCSGlycerol kinase
ATP:glycerol 3-phosphotransferase
Glycerokinase		Alignment
4E=1e-175GLPK_CHRSDGlycerol kinase
ATP:glycerol 3-phosphotransferase
Glycerokinase		Alignment
5E=1e-175B8IKN3_METNOGlycerol kinaseAlignment
HAMAP No significant hit
InterPro
Database:interpro:18.0
IPR000577 Carbohydrate kinase, FGGY (Conserved_site)
 [361-381]  PS00445
PS00445   FGGY_KINASES_2
 [135-147]  PS00933
PS00933   FGGY_KINASES_1
IPR000577 Carbohydrate kinase, FGGY (Domain)
 [6-251]  4.3e-105 PF00370
PF00370   FGGY_N
 [254-479]  9.9e-73 PF02782
PF02782   FGGY_C
IPR000577 Carbohydrate kinase, FGGY (Family)
 [54-496]  1.3e-217 PTHR10196
PTHR10196   XYLULOSE KINASE
 [254-479]  9.9e-73 PF02782
PF02782   FGGY_C
 [361-381]  PS00445
PS00445   FGGY_KINASES_2
 [6-251]  4.3e-105 PF00370
PF00370   FGGY_N
 [135-147]  PS00933
PS00933   FGGY_KINASES_1
IPR005999 Glycerol kinase (Family)
 [5-495]  TIGR01311
TIGR01311   glycerol_kin: glycerol kinase
 [54-496]  1.3e-217 PTHR10196:SF9
PTHR10196:SF9   GLYCEROL KINASE
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 499 amino acids
molecular mass 54,572.90 Da
pI 6.15
aa composition
AlaValLeuIlePheTrpProMetGlySer
12
(60aa)		6.6
(33aa)		8.2
(41aa)		5.2
(26aa)		3
(15aa)		2.6
(13aa)		3.6
(18aa)		2.4
(12aa)		8.8
(44aa)		4.6
(23aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
8.4
(42aa)		1.6
(8aa)		2
(10aa)		4.2
(21aa)		2
(10aa)		3.4
(17aa)		2.2
(11aa)		7
(35aa)		6.6
(33aa)		5.4
(27aa)

open this sectionSequence

close this sectionDistribution of Our Microbial Genomic DNA clones

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.