CDS Information : APA32_16984

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Acetobacter pasteurianus IFO 3283-32 (= NBRC 105190) chromosome	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Acetobacter pasteurianus IFO 3283-32 (= NBRC 105190)
Replicon	chromosome
Start / Stop / Direction	1,841,868 / 1,841,050 / -
Location	complement(1841050..1841868)
Type	CDS
Length	819 bp (272 aa)

Product	Transcriptional regulator MerR
Gene name
Functional category	Information Pathways - Transcription
EC number
Note	Chromosome variant locus=AP-TR03 (20 repeats) Contains hyper-mutable tandem repeats AP-TR03. The repetitive number in the IFO 3283-01, IFO 3283-12 and -07, IFO 3283-26, IFO 3283-32 and -03, IFO 3283-22 are 24, 22, 21, 20, 19, respectively.
KEGG pathway
Sequence feature	170..209 (a.a.) REPEAT
References

BLASTP Database:UniProtKB:15.0 show BLAST table	1 E=8e-35 B5ZL80_GLUDA Transcriptional regulator, MerR family Alignment 2 E=2e-34 A9HS23_GLUDA Putative transcriptional regulatory protein, MerR family Alignment 3 E=4e-33 Q0BTD8_GRABC Transcriptional regulator, MerR family Alignment 4 E=1e-31 A8I5K5_AZOC5 Regulatory protein Alignment 5 E=5e-31 A4TZJ6_9PROT Transcriptional regulator, MerR family Alignment
HAMAP	No significant hit
InterPro Database:interpro:18.0	IPR000551 Bacterial regulatory protein, MerR (Domain) PS50937   HTH_MERR_2 SM00422   no description PF00376   MerR IPR009061 Putative DNA binding (Domain) SSF46955   Putative DNA-binding domain
SignalP	No significant hit
TMHMM	No significant hit
SOSUI	No significant hit

size of protein	272 amino acids
molecular mass	30,078.68 Da
pI	3.86
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 8.8 (24aa) 7.7 (21aa) 5.9 (16aa) 2.9 (8aa) 2.2 (6aa) 0.4 (1aa) 12.5 (34aa) 1.1 (3aa) 3.7 (10aa) 6.3 (17aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 6.6 (18aa) 0 (0aa) 1.8 (5aa) 5.5 (15aa) 1.5 (4aa) 2.6 (7aa) 2.2 (6aa) 4.4 (12aa) 5.5 (15aa) 18.4 (50aa)

>APA32_16984 Transcriptional regulator MerR
ATGACTGATGAGGCGCAGACTTTTTCCGAAACAGGGGGAGAATCTTCTTCTCCCACAGCG
GAAAATGTAAGCACGAATTCAGCGCCTTCAGAAAAAGGGCCTTTTGCGTTTCGCACAATT
AGCGAAGTGGCAGATGAGCTTCATGTGCCGCAGCATACGCTTCGGTTGTGGGAAACGCAG
TTTCATCAGGTTCGGCCATTAAAGCGTGGTGGTGGCCGCCGGTATTATCGGCCTGCCGAT
ATAGAGCTTTTACGGCATATTGCAGATTTGCTTTATACTCAGGGCTATACCATCAAAGGT
GTGCAGCGGATTCTACAAAACGGTGGAGTGCCTGCTGCCGAAACACCTGCGCCTGAAGCA
ATCCAACAAGATGAGGCTGAAAAGCAGCCAGAAACTGCCGTAGAAGCAGTTGAGTCATCT
GAAGTTGCAGCAGAAGATTCTGAAATTGTAGAAGATTCTTCTGAAAAAGTGGTTGCTGTG
GATGATAATGCATCCACAATCCAGCCAGAGCCAGAGCCAGAGCCAGAGCCAGAGCCAGAG
CCAGAGCCAGAGCCAGAGCCAGAGCCAGAGCCAGAGCCAGAGCCAGAGCCAGAGCCAGAG
CCAGAGCCAGAGCCAGAGCCAGAGCCAACAGCAACTGCTGAAGATGTTCAGGATGCCACA
GATTTGTCACCAGAAATGGAAGATGCAGTGGTTACATTTGCATCTGTTGAGCCGCATCCG
CATATGACGGAACTGGTAGAACAGAACCGTCAGCTGCGTCAGGATCTGGCAGATGTGCTG
GTGGAGCTAGAAGAGTTTCGTAAAAAGCTGGTTTCTTAA


>APA32_16984 Transcriptional regulator MerR
MTDEAQTFSETGGESSSPTAENVSTNSAPSEKGPFAFRTISEVADELHVPQHTLRLWETQ
FHQVRPLKRGGGRRYYRPADIELLRHIADLLYTQGYTIKGVQRILQNGGVPAAETPAPEA
IQQDEAEKQPETAVEAVESSEVAAEDSEIVEDSSEKVVAVDDNASTIQPEPEPEPEPEPE
PEPEPEPEPEPEPEPEPEPEPEPEPEPEPTATAEDVQDATDLSPEMEDAVVTFASVEPHP
HMTELVEQNRQLRQDLADVLVELEEFRKKLVS

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.