CDS Information : APA32_18050

Display	1000bp 10000bp 100000bp Clone

Acetobacter pasteurianus IFO 3283-32 (= NBRC 105190) chromosome	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Acetobacter pasteurianus IFO 3283-32 (= NBRC 105190)
Replicon	chromosome
Start / Stop / Direction	1,952,347 / 1,953,732 / +
Location	1952347..1953732
Type	CDS
Length	1,386 bp (461 aa)

Product	Transposase
Gene name
Functional category	Transposase
EC number
Note	DDE (Asp,Asp,Glu) domain
KEGG pathway
Sequence feature
References

BLASTP Database:UniProtKB:15.0 show BLAST table	1 E=0 Q44283_ACEPA ORF Alignment 2 E=1e-138 Q6W1C6_RHISN Putative uncharacterized protein Alignment 3 E=1e-104 Q093Z7_STIAU ISsp1 Alignment 4 E=1e-98 B7KJ15_CYAP7 Transposase IS1380 family protein Alignment 5 E=6e-93 Q4C0L5_CROWT Transposase, IS4 Alignment
HAMAP	No significant hit
InterPro Database:interpro:18.0	IPR002559 Transposase, IS4 (Domain) PF01609   Transposase_11
SignalP	No significant hit
TMHMM	No significant hit
SOSUI	No significant hit

size of protein	461 amino acids
molecular mass	52,374.77 Da
pI	9.39
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 11.1 (51aa) 4.8 (22aa) 10.4 (48aa) 5 (23aa) 4.6 (21aa) 1.3 (6aa) 2.2 (10aa) 2.2 (10aa) 7.2 (33aa) 5.2 (24aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 5.2 (24aa) 2.6 (12aa) 2.2 (10aa) 3 (14aa) 2.8 (13aa) 2 (9aa) 3.9 (18aa) 12.8 (59aa) 7.4 (34aa) 4.3 (20aa)

>APA32_18050 Transposase
ATGCAGACAGAGTGTAGCGCAGGCGCGTATGAATTTCCAGCCTCCTGTGGACGGCGTGTT
GTGGCCCGTTTTGACGGGGGTCGCATGAGTTCGGATGGGGGCGTCATTCTGGTGAAGCAG
GCTGATGACATTCTGGGTCTCAGCCGCCGCTTTGCTGCCTGTTTTCGCGATAAGCGGCAT
CCCGGCTTTGTGGAATACCGGGTTGAAGACCTTGTCCGTCAGCGGATCATGGGCCTGGCA
CTGGGCTATGAAGATCTCAATGATCACGATGCCCTGCGGCATGACCTGATCTTTGGTCTG
GCCTCGGGCCGTCTGTCAGGAGGCCGGGCAAACTGCGCAGCACTGGCAGGAAAATCCACG
CTGAACCGGCTGGAGCGCAGTGGCCACAAGGCAGATCGTTACTGCCGCATCATTGCTGAT
CATGAGGCCCTGGCTACCCTGTTCGTGACGCTCTTCATGGACCAGCATGAGCGCGCACCC
GCCCGGATCGTTCTGGATGTGGATGCCACCGATGACCGTATCCATGGCCATCAGGAAGGC
CGGGCCTTTCATGGGTATTACGGCCATAACTGCTATCTGCCGTTATACATCTTCTGCGGA
GACCATCTCCTGAGCGCCACCCTGCGCACGGCAGACCGGGACCCGGGGAAGGAAGCACTG
GCAGACATCAGCCGGATCGTGGAGCAGATTAGGAACCGCTGGCCCCGGGTGCGTATCCTG
GTGCGTGGGGACAGCGGTTTCGCCCGGGACAGTCTGATGACATGGTGCGAAGACAACCAC
GTTGACTTCCTGTTCGGGCTTGCAGGCAACACCCGCCTGTATGACCGGATTGCCTCTTTG
TCCGCTGAGGTTCGTGACGAAGCCGCCACGACAGGCAGAGCGGCGCGCGGTTTCGCCTCC
TTTGACTGGATCACAAAGGACAGCTGGACGCGCCGCAGGCGGGTGGTGGCCAAGGCCGAA
TGGCGCCACGGCAACCGCTATCATCGCTTTATTGTCACCACGCTACCGCAGGGAATGTCC
GACCCCCGCCATCTCTACGAACAGATTTACTGCGCACGCGGGGATATGGAAAACCGCATC
AAGGAATGCCAGATGGATCTGTTCTCAGACAGGACCTCGTCCCACACCATCCGGGCCAAC
CAGCTCCGGCTGTGGTTCTCGGCCGCAGCCTATGTCCTGCTGACCGCTCTGCAAAGACTG
GCCCTTGGCCAGACCAGCCTGGAGACGGCGACCTGTGGCACCATACGCGCACGACTGCTC
AAAATCGCGACACGTGTAACGCTCAGCGTCCGTCGGATTGTCCTGTTCATGCCGGACATG
TTCCCCTGTCAGCACGAATTCGCCCTCGCTCATGCACGATTGCGAAGGCTCCGGCAGGCC
ATCTGA


>APA32_18050 Transposase
MQTECSAGAYEFPASCGRRVVARFDGGRMSSDGGVILVKQADDILGLSRRFAACFRDKRH
PGFVEYRVEDLVRQRIMGLALGYEDLNDHDALRHDLIFGLASGRLSGGRANCAALAGKST
LNRLERSGHKADRYCRIIADHEALATLFVTLFMDQHERAPARIVLDVDATDDRIHGHQEG
RAFHGYYGHNCYLPLYIFCGDHLLSATLRTADRDPGKEALADISRIVEQIRNRWPRVRIL
VRGDSGFARDSLMTWCEDNHVDFLFGLAGNTRLYDRIASLSAEVRDEAATTGRAARGFAS
FDWITKDSWTRRRRVVAKAEWRHGNRYHRFIVTTLPQGMSDPRHLYEQIYCARGDMENRI
KECQMDLFSDRTSSHTIRANQLRLWFSAAAYVLLTALQRLALGQTSLETATCGTIRARLL
KIATRVTLSVRRIVLFMPDMFPCQHEFALAHARLRRLRQAI

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.