CDS Information : APA32_18748

Display	1000bp 10000bp 100000bp Clone

Acetobacter pasteurianus IFO 3283-32 (= NBRC 105190) chromosome	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Acetobacter pasteurianus IFO 3283-32 (= NBRC 105190)
Replicon	chromosome
Start / Stop / Direction	2,039,077 / 2,039,766 / +
Location	2039077..2039766
Type	CDS
Length	690 bp (229 aa)

Product	DNA helicase restriction enzyme Type III R subunit
Gene name
Functional category	Information Pathways - Replication
EC number
Note	Probably pseudogene, C-terminal domain of a gene truncated by transposon
KEGG pathway
Sequence feature
References

BLASTP Database:UniProtKB:15.0 show BLAST table	1 E=1e-88 Q4J602_AZOVI Helicase domain protein Alignment 2 E=9e-75 Q2STW5_BURTA Helicase domain protein Alignment 3 E=2e-73 Q1DBB9_MYXXD Putative restriction/modification enzyme Alignment 4 E=3e-68 Q88BH4_PSESM Helicase domain protein Alignment 5 E=6e-68 B9KV44_RHOSH Putative uncharacterized protein Alignment
HAMAP	No significant hit
InterPro	No significant hit
SignalP	No significant hit
TMHMM	No significant hit
SOSUI	No significant hit

size of protein	229 amino acids
molecular mass	26,400.11 Da
pI	7.63
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 4.8 (11aa) 7.4 (17aa) 8.7 (20aa) 5.7 (13aa) 3.9 (9aa) 0.9 (2aa) 5.7 (13aa) 2.2 (5aa) 6.6 (15aa) 4.4 (10aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 6.1 (14aa) 0.4 (1aa) 3.9 (9aa) 3.9 (9aa) 6.6 (15aa) 7.4 (17aa) 1.7 (4aa) 6.1 (14aa) 7 (16aa) 6.6 (15aa)

>APA32_18748 DNA helicase restriction enzyme Type III R subunit
ATGAACACGTCTCAGGGTAGTCTATTTGAGCAAACACCTTCTCAACCACGTCTTGTGCAA
CGCGAAGCCATCACCGATGAAGGGTTAAAGCATTTCCAAGACGCCTACCCGGGTCAGGTT
ATCACTAAGCAAGACCTGTTCTATTATGTCTACGGGCTCCTGCATTCCCTTGAGTATCGG
AAACGCTATGCTGACACCTTGCGGAAGGAACTCCCCCGTATCCCGCGTGTAAAAACATAT
GAAGCTTTCAAAGCGTTCTCTGATGCCGGTCGCAGACTTGGTGAGATGCATGTCAATTTC
GACAGCCAGCCCATCTATGAAGGCGTCAAGGTCGATTACGGCAAAGGACCGCTGACACCT
GAAACCTTCCGGGTTGAAAAGATGAAATACGGCAAGGGTAAAGACAAAAGCATCCTACAT
TATAATGACCGCATCACCGTCACAGGCATTCCTCTGGAAGCCTATGACTATGTGGTGAAT
GGCAAGTCCGCTCTAGACTGGGTTGTCGAACGTCAGTGCGTGAAGACCGACAAGGCCAGC
GGTATCGTCAACGATGCCAATGACTGGGCTATCGAGACCATGGATAACCCACGCTATCCG
CTGGAACTATTCCTGCGGGTGATTACGATCAGCCTTGAAACCATGAAGATTGTGAACGGA
TTGCCTCCTTTGGATATTTTCTATAATTAA


>APA32_18748 DNA helicase restriction enzyme Type III R subunit
MNTSQGSLFEQTPSQPRLVQREAITDEGLKHFQDAYPGQVITKQDLFYYVYGLLHSLEYR
KRYADTLRKELPRIPRVKTYEAFKAFSDAGRRLGEMHVNFDSQPIYEGVKVDYGKGPLTP
ETFRVEKMKYGKGKDKSILHYNDRITVTGIPLEAYDYVVNGKSALDWVVERQCVKTDKAS
GIVNDANDWAIETMDNPRYPLELFLRVITISLETMKIVNGLPPLDIFYN

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.