CDS Information : APA32_21760

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Acetobacter pasteurianus IFO 3283-32 (= NBRC 105190) chromosome	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Acetobacter pasteurianus IFO 3283-32 (= NBRC 105190)
Replicon	chromosome
Start / Stop / Direction	2,369,507 / 2,370,001 / +
Location	2369507..2370001
Type	CDS
Length	495 bp (164 aa)

Product	Protein translocase subunit SecB
Gene name	secB-2
Functional category	Transport
EC number
Note	Chromosome variant locus=Gap3 no-insertion Transposon insertion was observed in the IFO 3283-01 strain.
KEGG pathway
Sequence feature	67 (a.a.) OTHER_PEP
References

BLASTP Database:UniProtKB:15.0 show BLAST table	1 E=6e-25 SECB_GRABC Protein-export protein secB Alignment 2 E=1e-24 SECB2_GLUOX Protein-export protein secB 2 Alignment 3 E=2e-24 SECB1_GLUOX Protein-export protein secB 1 Alignment 4 E=5e-24 SECB_GLUDA Protein-export protein secB Alignment 5 E=5e-24 SECB_ACICJ Protein-export protein secB Alignment
HAMAP	No significant hit
InterPro Database:interpro:18.0	IPR003708 Bacterial protein export chaperone SecB (Family) SSF54611   Bacterial protein-export protein SecB G3DSA:3.10.420.10   no description PF02556   SecB PD021849   Q6ND07_RHOPA_Q6ND07;
SignalP	No significant hit
TMHMM	No significant hit
SOSUI	No significant hit

size of protein	164 amino acids
molecular mass	18,127.90 Da
pI	5.19
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 11 (18aa) 7.3 (12aa) 11.6 (19aa) 6.1 (10aa) 4.3 (7aa) 0.6 (1aa) 6.7 (11aa) 3 (5aa) 6.7 (11aa) 3.7 (6aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 5.5 (9aa) 1.2 (2aa) 3.7 (6aa) 6.1 (10aa) 2.4 (4aa) 0.6 (1aa) 2.4 (4aa) 6.7 (11aa) 2.4 (4aa) 7.9 (13aa)

>APA32_21760 Protein translocase subunit SecB
ATGAATACCGAAACTGCAGATTCACTTGGCGGCGCATCCCAAACACCTCCTGCACCGTCT
ATTCTGATGGGAATCCAATATGTCAAATCTGTTGAATTTCAGGTTCTTGGGGCGCCGGCC
ATTTATTCACGCGTAACAGAACGCCCTCACCTTGGTGTTTCTGTGGATGTACGCGCTCAT
CAAATGGGCGAAAATCAGCCTAACTTTGAAGTTGAGCTTATCTTGCGGTGTCAGGGGCAT
CTTCCTGCACAACGGGAAGGGGAAGAAATTGTCCCCCTATTTGATGTGAATCTGATTTAT
GCGGGCATCTTTACGCTGCAGCACGCAACAGCAGAAACGTTTGAAACCCTGCTGCTTATA
GAAGCCCCCCGGCTTCTATACCCGGCCGCCCGCAACATGCTGGCCACGCTGTGCCGTGAA
GCAGGTTTCCTGCCAGTTATCATGCAGCAGATTGATTTTGCAGCATTGTGGCGAAACCGC
CGCGCAGTGGGCTAA


>APA32_21760 Protein translocase subunit SecB
MNTETADSLGGASQTPPAPSILMGIQYVKSVEFQVLGAPAIYSRVTERPHLGVSVDVRAH
QMGENQPNFEVELILRCQGHLPAQREGEEIVPLFDVNLIYAGIFTLQHATAETFETLLLI
EAPRLLYPAARNMLATLCREAGFLPVIMQQIDFAALWRNRRAVG

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.