CDS Information : APA32_24990

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Acetobacter pasteurianus IFO 3283-32 (= NBRC 105190) chromosome	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Acetobacter pasteurianus IFO 3283-32 (= NBRC 105190)
Replicon	chromosome
Start / Stop / Direction	2,705,405 / 2,704,260 / -
Location	complement(2704260..2705405)
Type	CDS
Length	1,146 bp (381 aa)

Product	Alanine racemase
Gene name
Functional category	Metabolic
EC number
Note
KEGG pathway	map:00252 KO:K01775 map:00473 KO:K01775
Sequence feature
References

BLASTP Database:UniProtKB:15.0 show BLAST table	1 E=0 A1XDT8_ACEAC Alanine racemase Alignment 2 E=1e-115 A9HMX6_GLUDA Alanine racemase Putative alanine racemase, catabolic Alignment 3 E=4e-99 B1M861_METRJ Alanine racemase Alignment 4 E=2e-96 Q5FP99_GLUOX Alanine racemase Alignment 5 E=6e-93 A9H9C8_GLUDA Putative alanine racemase, catabolic Alignment
HAMAP	No significant hit
InterPro Database:interpro:18.0	IPR000821 Alanine racemase region (Domain) TIGR00492   alr: alanine racemase PS00395   ALANINE_RACEMASE IPR001608 Alanine racemase, N-terminal (Domain) PF01168   Ala_racemase_N IPR009006 Alanine racemase/group IV decarboxylase, C-terminal (Domain) G3DSA:2.40.37.10   no description SSF50621   Alanine racemase C-terminal domain-like IPR011079 Alanine racemase, C-terminal (Domain) PF00842   Ala_racemase_C IPR020622 Alanine racemase, pyridoxal-phosphate attachment site (Binding_site) PS00395   ALANINE_RACEMASE
SignalP	No significant hit
TMHMM	No significant hit
SOSUI	No significant hit

size of protein	381 amino acids
molecular mass	40,609.65 Da
pI	7.64
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 14.7 (56aa) 9.4 (36aa) 11.8 (45aa) 2.9 (11aa) 2.6 (10aa) 0.8 (3aa) 5.2 (20aa) 2.1 (8aa) 8.1 (31aa) 6.6 (25aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 3.9 (15aa) 1.3 (5aa) 2.9 (11aa) 2.9 (11aa) 3.4 (13aa) 3.1 (12aa) 2.9 (11aa) 6 (23aa) 4.5 (17aa) 4.7 (18aa)

>APA32_24990 Alanine racemase
GTGGCGGTTGTGAATACTGTTTCGTCCTCAGCCAGAACATTGTGGCCGGCATCTCGCGCG
GGGGCTGTTCTTACAGTCAACCTGTCTGCCATTGCTGAAAATTACCGCTATCTTAAAAGC
CGACTAGGCAAAACAGCGTGTGCCGCAGTGGTTAAGGCGGATGCCTATGGGCTGGGTGTT
GCGCAGGTGGCGCCTGTTTTGGAAAAAGCAGGTGCAGAACATTTTTTTGTTGCGCATGTA
GATGAAGGACTTGCCCTCAGGCCATTTCTCTCTCCTCACACATCGGTAACAGTGTTGCAT
GGGCCTAGGCCTGATGCTGCTGAGGTATGTGTACGCAACAATCTGCGGCCTGTTCTGAAC
AGTTTGGAACAAGTTGCTGTTTTGCGAGATCTGGCAGCCAAAATGGATAAGCCTCTGGAT
GTGGCTATTCAGCTTGATACGGGCATGTCTCGTTTTGGGCTTTCAGAGGCGGATATTCAT
AAACTGGTGGCGTCTCCAGAGCTTCTGAAAGGCTTATTTGTCAGTCTGGTGATGAGTCAT
CTGGCGTGCGCAGATACACCGCAAAATCCAGCAAACACCATGCAGCGCGAACGGTTTGAG
GCATATGCCCGCATACTGCCGCAAGCGGCATTAAGCCTTTCTGCATCATCCGGCATTTTT
CTGGGGCCACAGTTTCATTTTGACCTCGTGCGCCCCGGAGCTGCTTTATATGGCGTGGCA
CCACAGAATGAGGGTGATAACCCGCTCAAGCCTGTGGTTGGCCTGCAAGCGCATATTCTG
CAAATTCGTCATTTATCCAAGGGAGACCGGGTCGGTTACGGGTTGACATGGCAGGCTCAT
GGTCCATGCCGTGTTGCCACTATTGCTACCGGTTATGCAGATGGTTTTGCCCGTGCCGGG
GCTGCCGCTGGGTGCGCTTGGTATAAGGGCTATCGGCTGCCAATTCTGGGCCGAATTTCC
ATGGATTCCATGACTGTTGATCTTTCTGCAGTGCCCGAGGGTCTGTTGGAAGAAGACAGC
ATGGTGGAACTTCTGAATGAGTCGTACGGCGTAGATGCTGTGGCCAAAGCAGAAGGCACA
ATTGGCTACGAAGTACTGACATCTCTGGGGCGGCGTTATCATCGCGTTTACGCAGCGGCT
GCCTGA


>APA32_24990 Alanine racemase
MAVVNTVSSSARTLWPASRAGAVLTVNLSAIAENYRYLKSRLGKTACAAVVKADAYGLGV
AQVAPVLEKAGAEHFFVAHVDEGLALRPFLSPHTSVTVLHGPRPDAAEVCVRNNLRPVLN
SLEQVAVLRDLAAKMDKPLDVAIQLDTGMSRFGLSEADIHKLVASPELLKGLFVSLVMSH
LACADTPQNPANTMQRERFEAYARILPQAALSLSASSGIFLGPQFHFDLVRPGAALYGVA
PQNEGDNPLKPVVGLQAHILQIRHLSKGDRVGYGLTWQAHGPCRVATIATGYADGFARAG
AAAGCAWYKGYRLPILGRISMDSMTVDLSAVPEGLLEEDSMVELLNESYGVDAVAKAEGT
IGYEVLTSLGRRYHRVYAAAA

NBRC No.	clone name	start	stop	length(bp)
G15-001-132	AS1FE12L00020D06	2,679,518	2,714,214	34,697
G15-001-133	AS1FE12L00024G12	2,700,478	2,735,558	35,081

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.