CDS Information : APA32_40324

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Acetobacter pasteurianus IFO 3283-32 (= NBRC 105190) plasmid 1

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Overview
Genome
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ID		change
Gene name		change

Genome	Display	Sync
plasmid 1

Location

Organism	Acetobacter pasteurianus IFO 3283-32 (= NBRC 105190)
Replicon	plasmid 1
Start / Stop / Direction	34,078 / 33,887 / -
Location	complement(33887..34078)
Type	CDS
Length	192 bp (63 aa)

Annotation

Product

Hypothetical protein

Gene name

Functional category

Unknown

EC number

Note

Contains hyper-mutable tandem repeats AP-TR07. The repetitive number in the IFO 3283-22, IFO 3283-26, IFO 3283-12 is 14, 13, respectively.

KEGG pathway

Sequence feature

References

Computational search results

BLASTP
Database:UniProtKB:15.0

show BLAST table

1	E=5e-06	A9UUP6_MONBE	Predicted protein	Alignment
2	E=3e-05	A8XKX4_CAEBR	Putative uncharacterized protein	Alignment
3	E=9e-05	A9UP88_MONBE	Predicted protein	Alignment
4	E=0.0001	A7RYN7_NEMVE	Predicted protein	Alignment
5	E=0.0003	A9V8Q9_MONBE	Predicted protein	Alignment

HAMAP

No significant hit

InterPro

No significant hit

SignalP

No significant hit

TMHMM

No significant hit

SOSUI

No significant hit

Calculated information (Amino acid sequence)

size of protein

63 amino acids

molecular mass

6,660.97 Da

8.13

aa composition

Ala	Val	Leu	Ile	Phe	Trp	Pro	Met	Gly	Ser
3.2 (2aa)	11.1 (7aa)	20.6 (13aa)	0 (0aa)	7.9 (5aa)	0 (0aa)	7.9 (5aa)	1.6 (1aa)	3.2 (2aa)	20.6 (13aa)
Thr	Cys	Asn	Gln	Tyr	Lys	His	Arg	Asp	Glu
4.8 (3aa)	9.5 (6aa)	3.2 (2aa)	0 (0aa)	0 (0aa)	0 (0aa)	3.2 (2aa)	3.2 (2aa)	0 (0aa)	0 (0aa)

Sequence

>APA32_40324 Hypothetical protein
ATGGCGAGCACCAACCACTTGCGCCACACGCTCAGGACTGGTGGATCTTCTGTCCTTCTG
TCCTTCTGTCCTTCTGTCCTTCTGTCCTTCTGTCCTTCTGTCCTTCTGTCCTTCTGTCCT
TCTGTCCTTCTGTCCTTCTGTCCTTCTGTCCTTCTGTCCTTCTGTCCTTCTGTCCTATGC
AACGTTGCATAG


>APA32_40324 Hypothetical protein
MASTNHLRHTLRTGGSSVLLSFCPSVLLSFCPSVLLSFCPSVLLSFCPSVLLSFCPSVLC
NVA

Distribution of Our Microbial Genomic DNA clones

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.