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CDS Information : APE_0001

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close this sectionGenomic map

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Aeropyrum pernix K1T (= NBRC 100138T) chromosome

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Organism Aeropyrum pernix K1T (= NBRC 100138T)
Replicon chromosome
Start / Stop / Direction 938 / 213 / -
Location complement(213..938)
Type CDS
Length 726 bp (241 aa)

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Product hypothetical protein
Gene name
Functional category No similarity
EC number
Note
KEGG pathway
Sequence feature
References

close this sectionRelated links to external database

UniProtQ9YGA0
INSDBAA78910.1 (DDBJ GenBank EMBL)
RefSeqNP_146894.1
GI14600380
GeneID1445602
UniParcUPI000005D97E

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=1e-127Q9YGA0_AERPEPutative uncharacterized proteinAlignment
HAMAP No significant hit
InterPro No significant hit
SignalP 
 [1-18]  0.72 Signal
Eukaryota   
TMHMM 
 [10-32]  Transmembrane (o-i) [53-75]  Transmembrane (i-o) [80-99]  Transmembrane (o-i) [120-142]  Transmembrane (i-o) [147-169]  Transmembrane (o-i) [189-210]  Transmembrane (i-o) [214-236]  Transmembrane (o-i)
Transmembrane 7   
SOSUI 
 [4-26]  Transmembrane [62-84]  Transmembrane [121-143]  Transmembrane [154-171]  Transmembrane [188-210]  Transmembrane [216-237]  Transmembrane
Transmembrane 6   

close this sectionCalculated information (Amino acid sequence)

size of protein 241 amino acids
molecular mass 26,274.66 Da
pI 8.66
aa composition
AlaValLeuIlePheTrpProMetGlySer
6.2
(15aa)		10
(24aa)		17.8
(43aa)		11.2
(27aa)		4.1
(10aa)		1.2
(3aa)		3.3
(8aa)		2.9
(7aa)		7.5
(18aa)		10.4
(25aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
6.2
(15aa)		0
(0aa)		0.8
(2aa)		1.2
(3aa)		5
(12aa)		3.7
(9aa)		0.8
(2aa)		2.1
(5aa)		0.4
(1aa)		5
(12aa)

open this sectionSequence