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CDS Information : APE_0004

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Aeropyrum pernix K1T (= NBRC 100138T) chromosome

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Organism Aeropyrum pernix K1T (= NBRC 100138T)
Replicon chromosome
Start / Stop / Direction 2,174 / 1,260 / -
Location complement(1260..2174)
Type CDS
Length 915 bp (304 aa)

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Product hypothetical protein
Gene name
Functional category Similar to unknown proteins
- From B. subtilis
EC number
Note
KEGG pathway
Sequence feature
References

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UniProtQ9YG97
INSDBAA78913.1 (DDBJ GenBank EMBL)
RefSeqNP_146896.1
GI14600382
GeneID1445578
UniParcUPI000005D981

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=1e-170Q9YG97_AERPEPutative uncharacterized proteinAlignment
2E=3e-18A3MS71_PYRCJAbortive infection proteinAlignment
3E=1e-13B1L468_KORCOAbortive infection proteinAlignment
4E=2e-13B1I0R3_DESAPAbortive infection proteinAlignment
5E=3e-13Q746D2_THET2Hypothetical membrane spanning proteinAlignment
HAMAP No significant hit
InterPro
Database:interpro:25.0
IPR003675 Abortive infection protein (Family)
 [153-265]  3.5e-10 PF02517
PF02517   Abi
SignalP
 [1-24]  0.596 Signal
Eukaryota   
TMHMM
 [13-32]  Transmembrane (i-o) [52-74]  Transmembrane (o-i) [98-120]  Transmembrane (i-o) [140-162]  Transmembrane (o-i) [182-204]  Transmembrane (i-o) [219-241]  Transmembrane (o-i) [248-270]  Transmembrane (i-o) [275-297]  Transmembrane (o-i)
Transmembrane 8   
SOSUI
 [13-35]  Transmembrane [51-73]  Transmembrane [95-117]  Transmembrane [140-162]  Transmembrane [179-201]  Transmembrane [222-241]  Transmembrane [277-299]  Transmembrane
Transmembrane 7   

close this sectionCalculated information (Amino acid sequence)

size of protein 304 amino acids
molecular mass 33,285.89 Da
pI 10.1
aa composition
AlaValLeuIlePheTrpProMetGlySer
7.9
(24aa)
8.9
(27aa)
14.1
(43aa)
11.8
(36aa)
3
(9aa)
3
(9aa)
4.6
(14aa)
2.6
(8aa)
8.2
(25aa)
6.6
(20aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
6.9
(21aa)
0.7
(2aa)
3.6
(11aa)
0.7
(2aa)
3.9
(12aa)
3.9
(12aa)
1.3
(4aa)
3.9
(12aa)
1.6
(5aa)
2.6
(8aa)

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