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CDS Information : APE_0031.1

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Aeropyrum pernix K1T (= NBRC 100138T) chromosome

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Organism Aeropyrum pernix K1T (= NBRC 100138T)
Replicon chromosome
Start / Stop / Direction 19,396 / 20,850 / +
Location 19396..20850
Type CDS
Length 1,455 bp (484 aa)

close this sectionAnnotation

Product putative MFS transporter
Gene name
Functional category Cell envelope and cellular processes
- Transport/binding proteins and lipoproteins
EC number
Note
KEGG pathway
Sequence feature
References Family/Domain:IPR007114
Uniprot:P39886 Pubmed:1592819

close this sectionRelated links to external database

UniProtQ9YG70
INSDBAA78940.2 (DDBJ GenBank EMBL)
RefSeqNP_146912.1 : N-term changed (-9)
GI14600398 : N-term changed (-9)
GeneID1445594 : N-term changed (-9)
UniParcUPI0000E52CF1

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=0Q9YG70_AERPEPutative MFS transporterAlignment
2E=2e-62Q8ZT99_PYRAEAntibiotic resistance (Efflux) protein, conjecturalAlignment
3E=4e-61A4WLP9_PYRARMajor facilitator superfamily MFS_1Alignment
4E=6e-55Q3SA88_9EURYPermease of the major facilitator superfamilyAlignment
5E=1e-54B5IHM7_9EURYMajor facilitator superfamily MFS_1
Transporter, major facilitator family		Alignment
HAMAP No significant hit
InterPro
Database:interpro:25.0
IPR007114 Major facilitator superfamily (Family)
 [14-473]  PS50850
PS50850   MFS
IPR011701 Major facilitator superfamily MFS-1 (Domain)
 [18-417]  1.2e-45 PF07690
PF07690   MFS_1
IPR011701 Major facilitator superfamily MFS_1 (Family)
 [18-417]  1.2e-45 PF07690
PF07690   MFS_1
IPR016196 Major facilitator superfamily, general substrate transporter (Domain)
 [1-468]  4.69998262513189e-61 SSF103473
SSF103473   MFS_gen_substrate_transporter
IPR020846 Major facilitator superfamily domain (Domain)
 [14-473]  PS50850
PS50850   MFS
SignalP 
 [1-30]  0.861 Signal
Eukaryota   
 [1-30]  0.631 Signal
Bacteria, Gram-negative   
TMHMM 
 [13-35]  Transmembrane (i-o) [50-72]  Transmembrane (o-i) [81-98]  Transmembrane (i-o) [103-125]  Transmembrane (o-i) [137-159]  Transmembrane (i-o) [169-187]  Transmembrane (o-i) [207-229]  Transmembrane (i-o) [234-253]  Transmembrane (o-i) [273-292]  Transmembrane (i-o) [312-334]  Transmembrane (o-i) [341-358]  Transmembrane (i-o) [368-390]  Transmembrane (o-i) [402-424]  Transmembrane (i-o) [444-466]  Transmembrane (o-i)
Transmembrane 14   
SOSUI 
 [18-40]  Transmembrane [52-74]  Transmembrane [83-105]  Transmembrane [137-159]  Transmembrane [166-188]  Transmembrane [203-225]  Transmembrane [231-252]  Transmembrane [273-295]  Transmembrane [314-336]  Transmembrane [341-363]  Transmembrane [370-392]  Transmembrane [407-429]  Transmembrane [446-468]  Transmembrane
Transmembrane 13   

close this sectionCalculated information (Amino acid sequence)

size of protein 484 amino acids
molecular mass 51,778.57 Da
pI 9.3
aa composition
AlaValLeuIlePheTrpProMetGlySer
9.3
(45aa)		8.1
(39aa)		18.6
(90aa)		8.3
(40aa)		4.1
(20aa)		0.8
(4aa)		4.8
(23aa)		2.5
(12aa)		7
(34aa)		11.2
(54aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
6
(29aa)		0.4
(2aa)		2.3
(11aa)		1.9
(9aa)		3.3
(16aa)		1.7
(8aa)		0.6
(3aa)		4.3
(21aa)		1.9
(9aa)		3.1
(15aa)

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