small fontnormal fontlarge fontmail to

CDS Information : APE_0038.1

close allopen/close all

close this sectionGenomic map

Display

Aeropyrum pernix K1T (= NBRC 100138T) chromosome

 Legend Jump
Overview 
Genome
Proteome 

close this sectionLocation

Organism Aeropyrum pernix K1T (= NBRC 100138T)
Replicon chromosome
Start / Stop / Direction 23,927 / 24,823 / +
Location 23927..24823
Type CDS
Length 897 bp (298 aa)

close this sectionAnnotation

Product ABC transporter, permease protein
Gene name
Functional category Cell envelope and cellular processes
- Transport/binding proteins and lipoproteins
EC number
Note
KEGG pathway
Sequence feature
References Family/Domain:IPR000515
Uniprot:Q9Z3R6 Pubmed:10400573

close this sectionRelated links to external database

UniProtQ9YG63
INSDBAA78947.2 (DDBJ GenBank EMBL)
RefSeqNP_146915.1 : N-term changed (+99)
GI14600401 : N-term changed (+99)
GeneID1445597 : N-term changed (+99)
UniParcUPI0000E52CF4

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=1e-166Q9YG63_AERPEABC transporter, permease proteinAlignment
2E=4e-81A3MVW1_PYRCJBinding-protein-dependent transport systems inner membrane componentAlignment
3E=2e-80C6A1D0_THESMTrehalose/maltose ABC transporter, permease componentAlignment
4E=2e-78Q8ZXE4_PYRAEMultiple sugar transport permeaseAlignment
5E=5e-76Y1038_PYRHOProbable ABC transporter permease protein PH1038Alignment
HAMAP No significant hit
InterPro
Database:interpro:25.0
IPR000515 Binding-protein-dependent transport systems inner membrane component (Family)
 [93-283]  6.70000000000001e-18 PF00528
PF00528   BPD_transp_1
 [77-290]  PS50928
PS50928   ABC_TM1
SignalP 
 [1-32]  0.498 Signal
Bacteria, Gram-negative   
 [1-32]  0.643 Signal
Eukaryota   
 [1-28]  0.565 Signal
Bacteria, Gram-positive   
TMHMM 
 [12-34]  Transmembrane (i-o) [80-102]  Transmembrane (o-i) [114-133]  Transmembrane (i-o) [174-196]  Transmembrane (o-i) [209-231]  Transmembrane (i-o) [236-258]  Transmembrane (o-i) [271-293]  Transmembrane (i-o)
Transmembrane 7   
SOSUI 
 [13-35]  Transmembrane [77-99]  Transmembrane [110-132]  Transmembrane [136-158]  Transmembrane [167-189]  Transmembrane [209-231]  Transmembrane [239-261]  Transmembrane [272-293]  Transmembrane
Transmembrane 8   

close this sectionCalculated information (Amino acid sequence)

size of protein 298 amino acids
molecular mass 32,797.31 Da
pI 9.7
aa composition
AlaValLeuIlePheTrpProMetGlySer
9.1
(27aa)		10.4
(31aa)		14.1
(42aa)		9.1
(27aa)		6
(18aa)		3
(9aa)		6
(18aa)		3.4
(10aa)		7.7
(23aa)		6.4
(19aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
5.4
(16aa)		0
(0aa)		1.7
(5aa)		1
(3aa)		4
(12aa)		3
(9aa)		1.7
(5aa)		3.4
(10aa)		2.7
(8aa)		2
(6aa)

open this sectionSequence