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CDS Information : APE_0047.1

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Aeropyrum pernix K1T (= NBRC 100138T) chromosome

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Organism Aeropyrum pernix K1T (= NBRC 100138T)
Replicon chromosome
Start / Stop / Direction 28,128 / 29,060 / +
Location 28128..29060
Type CDS
Length 933 bp (310 aa)

close this sectionAnnotation

Product phosphate ABC transporter, permease protein
Gene name pstC
Functional category Cell envelope and cellular processes
- Transport/binding proteins and lipoproteins
EC number
Note
KEGG pathway
Sequence feature
References Family/Domain:IPR000515
Uniprot:P07653 Pubmed:2993631,3881386

close this sectionRelated links to external database

UniProtQ9YG54
INSDBAA78956.2 (DDBJ GenBank EMBL)
RefSeqNP_146919.1 : N-term changed (+201)
GI14600405 : N-term changed (+201)
GeneID1445601 : N-term changed (+201)
UniParcUPI0000E52CF7

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=1e-171Q9YG54_AERPEPhosphate ABC transporter, permease proteinAlignment
2E=5e-72D3CP66_9CRENPhosphate ABC transporter, inner membrane subunit PstCAlignment
3E=7e-72A3DN13_STAMFPhosphate ABC transporter, inner membrane subunit PstCAlignment
4E=2e-70B1L5D7_KORCOPhosphate ABC transporter, inner membrane subunit PstCAlignment
5E=4e-70C9RGJ3_METVMPhosphate ABC transporter, inner membrane subunit PstCAlignment
HAMAP No significant hit
InterPro
Database:interpro:25.0
IPR000515 Binding-protein-dependent transport systems inner membrane component (Family)
 [66-299]  PS50928
PS50928   ABC_TM1
 [105-302]  4.3e-10 PF00528
PF00528   BPD_transp_1
IPR011864 Phosphate ABC transporter, permease protein PstC (Family)
 [8-307]  9.09992432541739e-83 TIGR02138
TIGR02138   phosphate_pstC
SignalP No significant hit
TMHMM 
 [12-34]  Transmembrane (i-o) [73-95]  Transmembrane (o-i) [125-147]  Transmembrane (i-o) [162-184]  Transmembrane (o-i) [221-243]  Transmembrane (i-o) [281-303]  Transmembrane (o-i)
Transmembrane 6   
SOSUI 
 [14-36]  Transmembrane [72-94]  Transmembrane [113-135]  Transmembrane [137-159]  Transmembrane [163-185]  Transmembrane [211-233]  Transmembrane [240-262]  Transmembrane [279-301]  Transmembrane
Transmembrane 8   

close this sectionCalculated information (Amino acid sequence)

size of protein 310 amino acids
molecular mass 33,931.54 Da
pI 9.63
aa composition
AlaValLeuIlePheTrpProMetGlySer
9.7
(30aa)		9.4
(29aa)		16.5
(51aa)		6.8
(21aa)		5.5
(17aa)		1
(3aa)		5.5
(17aa)		3.2
(10aa)		6.8
(21aa)		6.8
(21aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
8.1
(25aa)		0.6
(2aa)		2.9
(9aa)		1
(3aa)		6.1
(19aa)		1.9
(6aa)		0
(0aa)		4.5
(14aa)		1
(3aa)		2.9
(9aa)

open this sectionSequence