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CDS Information : APE_0171.1

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Aeropyrum pernix K1T (= NBRC 100138T) chromosome

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Organism Aeropyrum pernix K1T (= NBRC 100138T)
Replicon chromosome
Start / Stop / Direction 128,419 / 127,388 / -
Location complement(127388..128419)
Type CDS
Length 1,032 bp (343 aa)

close this sectionAnnotation

Product glyceraldehyde 3-phosphate dehydrogenase (GAPDH)
Gene name
Functional category Intermediary metabolism
- Metabolism of carbohydrates and related molecules
- - Main glycolytic pathways
EC number 1.2.1.59
Note
KEGG pathway
Sequence feature
References Uniprot:P39460 Pubmed:8259927,8521845,10448043

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Proteome results
2D-PAGE (Protein Sequencer)
 1D-PAGE-LC
 MDLC
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UniProtQ9YFS9
INSDBAA79082.2 (DDBJ GenBank EMBL)
RefSeqNP_147019.1 : N-term changed (+9)
GI14600503 : N-term changed (+9)
GeneID1445701 : N-term changed (+9)
UniParcUPI000012AE85

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=0G3P_AERPEGlyceraldehyde-3-phosphate dehydrogenase
NAD(P)-dependent glyceraldehyde-3-phosphate dehydrogenase		Alignment
2E=0Q18MU0_AERPEGlyceraldehyde-3-phosphate dehydrogenaseAlignment
3E=0Q18MU5_AERPEGlyceraldehyde-3-phosphate dehydrogenaseAlignment
4E=0Q18MT9_AERPEGlyceraldehyde-3-phosphate dehydrogenaseAlignment
5E=0Q18MV4_AERPEGlyceraldehyde-3-phosphate dehydrogenaseAlignment
HAMAP No significant hit
InterPro
Database:interpro:25.0
IPR000173 Glyceraldehyde 3-phosphate dehydrogenase (Family)
 [2-323]  2.50000909916183e-87 PIRSF000149
PIRSF000149   GAP_DH
 [4-142]  1.1e-18 PF00044
PF00044   Gp_dh_N
 [140-147]  PS00071
PS00071   GAPDH
 [147-300]  1.6e-14 PF02800
PF02800   Gp_dh_C
IPR006436 Glyceraldehyde-3-phosphate dehydrogenase, type II (Family)
 [6-339]  TIGR01546
TIGR01546   GAPDH-II_archae
IPR016040 NAD(P)-binding domain (Domain)
 [1-38]  0.000230000061930563 G3DSA:3.40.50.720
G3DSA:3.40.50.720   NAD(P)-bd
 [4-161]  4.9e-51 SSF51735
SSF51735   NAD(P)-bd
IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (Domain)
 [4-142]  1e-11 SM00846
SM00846   Gp_dh_N
 [4-142]  1.1e-18 PF00044
PF00044   Gp_dh_N
IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (Domain)
 [147-300]  1.6e-14 PF02800
PF02800   Gp_dh_C
IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site (Active_site)
 [140-147]  PS00071
PS00071   GAPDH
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 343 amino acids
molecular mass 37,173.09 Da
pI 9.29
aa composition
AlaValLeuIlePheTrpProMetGlySer
9
(31aa)		12.5
(43aa)		9.9
(34aa)		4.4
(15aa)		2
(7aa)		0.6
(2aa)		5.2
(18aa)		2
(7aa)		7.6
(26aa)		6.1
(21aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
7
(24aa)		0.9
(3aa)		2
(7aa)		2
(7aa)		2
(7aa)		6.4
(22aa)		1.7
(6aa)		6.7
(23aa)		4.4
(15aa)		7.3
(25aa)

open this sectionSequence