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CDS Information : APE_0244.1

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Aeropyrum pernix K1T (= NBRC 100138T) chromosome

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Organism Aeropyrum pernix K1T (= NBRC 100138T)
Replicon chromosome
Start / Stop / Direction 176,968 / 176,357 / -
Location complement(176357..176968)
Type CDS
Length 612 bp (203 aa)

close this sectionAnnotation

Product pyridoxal 5'-phosphate biosynthesis protein
Gene name pdxT
Functional category Intermediary metabolism
- Metabolism of coenzymes and prosthetic groups
EC number
Note
KEGG pathway
Sequence feature
References Uniprot:Q9HGT0 Pubmed:11344146
Uniprot:O59079 Pubmed:14762015,14585832
Uniprot:Q9C1K5 Pubmed:11238395

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Proteome results
2D-PAGE
 2D-PAGE (Protein Sequencer)
 1D-PAGE-LC
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UniProtQ9YFK4
INSDBAA79157.2 (DDBJ GenBank EMBL)
RefSeqNP_147078.1 : N-term changed (-51)
GI14600561 : N-term changed (-51)
GeneID1445760 : N-term changed (-51)
UniParcUPI000053E866

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=1e-111PDXT_AERPEGlutamine amidotransferase subunit pdxT
Glutamine amidotransferase glutaminase subunit pdxT		Alignment
2E=7e-65PDXT_STAMFGlutamine amidotransferase subunit pdxT
Glutamine amidotransferase glutaminase subunit pdxT		Alignment
3E=3e-55PDXT_SULIMGlutamine amidotransferase subunit pdxT
Glutamine amidotransferase glutaminase subunit pdxT		Alignment
4E=3e-55PDXT_SULIKGlutamine amidotransferase subunit pdxT
Glutamine amidotransferase glutaminase subunit pdxT		Alignment
5E=3e-55PDXT_SULIAGlutamine amidotransferase subunit pdxT
Glutamine amidotransferase glutaminase subunit pdxT		Alignment
HAMAP No significant hit
InterPro
Database:interpro:25.0
IPR002161 SNO glutamine amidotransferase (Family)
 [2-202]  PS51130
PS51130   PDXT_SNO_2
 [5-201]  2.89999999999999e-47 PF01174
PF01174   SNO
 [46-56]  PS01236
PS01236   PDXT_SNO_1
 [1-203]  7.6999848053369e-95 PIRSF005639
PIRSF005639   Glut_amidoT_SNO
 [2-199]  6.90004508941104e-69 TIGR03800
TIGR03800   PLP_synth_Pdx2
IPR021196 PdxT/SNO family, conserved site (Conserved_site)
 [46-56]  PS01236
PS01236   PDXT_SNO_1
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 203 amino acids
molecular mass 22,236.89 Da
pI 9.8
aa composition
AlaValLeuIlePheTrpProMetGlySer
6.9
(14aa)		10.8
(22aa)		11.8
(24aa)		5.9
(12aa)		3.4
(7aa)		1
(2aa)		4.4
(9aa)		2
(4aa)		12.8
(26aa)		3.4
(7aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
3.9
(8aa)		0.5
(1aa)		1.5
(3aa)		3
(6aa)		2
(4aa)		3.9
(8aa)		2
(4aa)		9.4
(19aa)		3.9
(8aa)		7.4
(15aa)

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