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CDS Information : APE_0354.1

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Aeropyrum pernix K1T (= NBRC 100138T) chromosome

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Organism Aeropyrum pernix K1T (= NBRC 100138T)
Replicon chromosome
Start / Stop / Direction 255,756 / 255,178 / -
Location complement(255178..255756)
Type CDS
Length 579 bp (192 aa)

close this sectionAnnotation

Product 50S ribosomal protein L5P
Gene name rpl5p
Functional category Information pathways
- Protein synthesis
- - Ribosomal proteins
EC number
Note
KEGG pathway
Sequence feature
References

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Proteome results
2D-PAGE
 1D-PAGE-LC
 MDLC
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close this sectionRelated links to external database

UniProtQ9YF87 : N-term changed (+6)
INSDBAA79309.2 (DDBJ GenBank EMBL)
RefSeqNP_147174.1 : N-term changed (+6)
GI14600656 : N-term changed (+6)
GeneID1444570 : N-term changed (+6)
UniParcUPI000005DAEA : N-term changed (+6)

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=1e-105RL5_AERPE50S ribosomal protein L5PAlignment
2E=6e-64A3DNC0_STAMFLSU ribosomal protein L5PAlignment
3E=3e-63A8ACD5_IGNH4LSU ribosomal protein L5PAlignment
4E=9e-61D3CPH6_9CRENRibosomal protein L5Alignment
5E=5e-59A2BMD2_HYPBU50S ribosomal protein L5Alignment
HAMAP No significant hit
InterPro
Database:interpro:25.0
IPR002132 Ribosomal protein L5 (Family)
 [1-192]  8.50003024809048e-96 PIRSF002161
PIRSF002161   Ribosomal_L5
 [82-180]  1.6e-21 PF00673
PF00673   Ribosomal_L5_C
 [24-191]  3.39999972437687e-55 SSF55282
SSF55282   Ribosomal_L5
 [26-78]  4.2e-17 PF00281
PF00281   Ribosomal_L5
IPR022803 Ribosomal protein L5 domain (Domain)
 [24-191]  3.39999972437687e-55 SSF55282
SSF55282   Ribosomal_L5
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 192 amino acids
molecular mass 21,873.60 Da
pI 11.86
aa composition
AlaValLeuIlePheTrpProMetGlySer
5.7
(11aa)		9.9
(19aa)		7.3
(14aa)		8.9
(17aa)		3.1
(6aa)		0.5
(1aa)		5.2
(10aa)		2.6
(5aa)		7.8
(15aa)		4.7
(9aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
4.7
(9aa)		0
(0aa)		2.6
(5aa)		3.6
(7aa)		0.5
(1aa)		5.7
(11aa)		3.1
(6aa)		13.5
(26aa)		2.6
(5aa)		7.8
(15aa)

open this sectionSequence