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CDS Information : APE_0396.1

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Aeropyrum pernix K1T (= NBRC 100138T) chromosome

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Organism Aeropyrum pernix K1T (= NBRC 100138T)
Replicon chromosome
Start / Stop / Direction 276,331 / 274,664 / -
Location complement(274664..276331)
Type CDS
Length 1,668 bp (555 aa)

close this sectionAnnotation

Product medium-chain-fatty-acid--CoA ligase
Gene name alkK
Functional category Intermediary metabolism
- Metabolism of lipids
EC number 6.2.1.-
Note
KEGG pathway
Sequence feature
References Uniprot:Q00594 Pubmed:1453953

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Proteome results
2D-PAGE (Protein Sequencer)
 1D-PAGE-LC
 MDLC
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UniProtQ9YF45
INSDBAA79351.2 (DDBJ GenBank EMBL)
RefSeqNP_147199.1 : N-term changed (+12)
GI14600679 : N-term changed (+12)
GeneID1444593 : N-term changed (+12)
UniParcUPI0000E52D93

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=0Q9YF45_AERPEMedium-chain-fatty-acid--CoA ligaseAlignment
2E=1e-147A1RS84_PYRILAMP-dependent synthetase and ligaseAlignment
3E=1e-145A3MWS3_PYRCJAMP-dependent synthetase and ligaseAlignment
4E=1e-144Q8ZVD8_PYRAEMedium-chain acyl-CoA ligaseAlignment
5E=1e-141A4WMX9_PYRARAMP-dependent synthetase and ligaseAlignment
HAMAP No significant hit
InterPro
Database:interpro:25.0
IPR000873 AMP-dependent synthetase and ligase (Domain)
 [186-197]  PS00455
PS00455   AMP_BINDING
 [45-468]  4.30000000000003e-106 PF00501
PF00501   AMP-binding
IPR020845 AMP-binding, conserved site (Conserved_site)
 [186-197]  PS00455
PS00455   AMP_BINDING
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 555 amino acids
molecular mass 62,275.89 Da
pI 6.98
aa composition
AlaValLeuIlePheTrpProMetGlySer
7.7
(43aa)		8.3
(46aa)		10.3
(57aa)		5.9
(33aa)		1.8
(10aa)		3.1
(17aa)		7
(39aa)		2.9
(16aa)		7.7
(43aa)		4.3
(24aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
6.1
(34aa)		0
(0aa)		2.2
(12aa)		2
(11aa)		3.4
(19aa)		5.8
(32aa)		3.6
(20aa)		5.6
(31aa)		5
(28aa)		7.2
(40aa)

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