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CDS Information : APE_0436.1

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Aeropyrum pernix K1T (= NBRC 100138T) chromosome

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Organism Aeropyrum pernix K1T (= NBRC 100138T)
Replicon chromosome
Start / Stop / Direction 306,025 / 305,192 / -
Location complement(305192..306025)
Type CDS
Length 834 bp (277 aa)

close this sectionAnnotation

Product translation initiation factor 2 alpha subunit (aIF-2-alpha)
Gene name aif2a
Functional category Information pathways
- Protein synthesis
- - Initiation
EC number
Note
KEGG pathway
Sequence feature
References HAMAP:MF_00231
Uniprot:Q9V0E4 Pubmed:11927566,14761973

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Proteome results
2D-PAGE
 1D-PAGE-LC
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UniProtQ9YF02
INSDBAA79394.2 (DDBJ GenBank EMBL)
RefSeqNP_147227.1 : N-term changed (-84)
GI14600706 : N-term changed (-84)
GeneID1444622 : N-term changed (-84)
UniParcUPI000012D27A

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=1e-154IF2A_AERPETranslation initiation factor 2 subunit alpha
eIF-2-alpha
aIF2-alpha		Alignment
2E=1e-85IF2A_HYPBUTranslation initiation factor 2 subunit alpha
eIF-2-alpha
aIF2-alpha		Alignment
3E=8e-80IF2A_STAMFTranslation initiation factor 2 subunit alpha
eIF-2-alpha
aIF2-alpha		Alignment
4E=2e-78D3CQ44_9CRENTranslation initiation factor 2, alpha subunitAlignment
5E=7e-75B8D6L9_DESK1Translation initiation factor IF-2 subunit alphaAlignment
HAMAP No significant hit
InterPro
Database:interpro:25.0
IPR003029 S1, RNA binding (Domain)
 [19-93]  3.5e-12 PF00575
PF00575   S1
 [22-93]  PS50126
PS50126   S1
 [20-93]  1.29999924468179e-14 SM00316
SM00316   S1
IPR008994 Nucleic acid-binding, OB-fold (Domain)
 [16-181]  4.3e-37 SSF50249
SSF50249   Nucleic_acid_OB
IPR011488 Eukaryotic translation initiation factor 2, alpha subunit (Domain)
 [130-246]  5.09999999999998e-24 PF07541
PF07541   EIF_2_alpha
IPR011488 Translation initiation factor 2, alpha subunit (Family)
 [130-246]  5.09999999999998e-24 PF07541
PF07541   EIF_2_alpha
IPR012340 Nucleic acid-binding, OB-fold (Domain)
 [7-95]  4.30000170645879e-24 G3DSA:2.40.50.140
G3DSA:2.40.50.140   OB_NA_bd_sub
IPR024054 Translation initiation factor 2, alpha subunit, middle domain (Domain)
 [96-181]  2.10000037262654e-07 G3DSA:1.10.150.190
G3DSA:1.10.150.190   G3DSA:1.10.150.190
IPR024055 Translation initiation factor 2, alpha subunit, C-terminal (Domain)
 [185-276]  4.7e-12 SSF110993
SSF110993   SSF110993
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 277 amino acids
molecular mass 31,478.77 Da
pI 9.99
aa composition
AlaValLeuIlePheTrpProMetGlySer
8.7
(24aa)		12.6
(35aa)		9.4
(26aa)		3.6
(10aa)		2.2
(6aa)		1.1
(3aa)		3.2
(9aa)		2.5
(7aa)		6.5
(18aa)		4.3
(12aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
3.6
(10aa)		0
(0aa)		0.7
(2aa)		2.2
(6aa)		4.7
(13aa)		11.6
(32aa)		1.1
(3aa)		7.2
(20aa)		4
(11aa)		10.8
(30aa)

open this sectionSequence