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CDS Information : APE_0672.1

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Aeropyrum pernix K1T (= NBRC 100138T) chromosome

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Organism Aeropyrum pernix K1T (= NBRC 100138T)
Replicon chromosome
Start / Stop / Direction 449,870 / 448,944 / -
Location complement(448944..449870)
Type CDS
Length 927 bp (308 aa)

close this sectionAnnotation

Product malate dehydrogenase
Gene name mdh
Functional category Intermediary metabolism
- Metabolism of carbohydrates and related molecules
- - TCA cycle
EC number 1.1.1.37
Note
KEGG pathway
Sequence feature
References HAMAP:MF_00487

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Proteome results
2D-PAGE
 2D-PAGE (Protein Sequencer)
 1D-PAGE-LC
 MDLC
Show sequence

close this sectionRelated links to external database

UniProtQ9YEA1 : N-term changed (+15)
INSDBAA79645.2 (DDBJ GenBank EMBL)
RefSeqNP_147405.1 : N-term changed (+15)
GI14600880 : N-term changed (+15)
GeneID1444806 : N-term changed (+15)
UniParcUPI000005DC3A : N-term changed (+15)

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=1e-175MDH_AERPEMalate dehydrogenaseAlignment
2E=1e-175Q18MR8_AERPEMalate dehydrogenaseAlignment
3E=1e-174Q18MT6_AERPEMalate dehydrogenaseAlignment
4E=1e-174Q18MS4_AERPEMalate dehydrogenaseAlignment
5E=1e-174Q18MS7_AERPEMalate dehydrogenaseAlignment
HAMAP No significant hit
InterPro
Database:interpro:25.0
IPR001236 Lactate/malate dehydrogenase, N-terminal (Domain)
 [2-139]  7.29999999999999e-33 PF00056
PF00056   Ldh_1_N
IPR001236 Lactate/malate dehydrogenase (Family)
 [144-300]  2.5e-22 PF02866
PF02866   Ldh_1_C
 [2-139]  7.29999999999999e-33 PF00056
PF00056   Ldh_1_N
 [140-302]  1e-44 G3DSA:3.90.110.10
G3DSA:3.90.110.10   lact_mal_DH
IPR001557 L-lactate/malate dehydrogenase (Family)
 [1-308]  PIRSF000102
PIRSF000102   Lac_mal_DH
 [1-25]  1e-28 PR00086 [25-49]  1e-28 PR00086 [113-133]  1e-28 PR00086 [137-155]  1e-28 PR00086 [167-180]  1e-28 PR00086
PR00086   LLDHDRGNASE
IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (Domain)
 [141-302]  1.9000069431527e-49 SSF56327
SSF56327   Lactate_DH/Glyco_hydro_4_C
 [140-302]  1e-44 G3DSA:3.90.110.10
G3DSA:3.90.110.10   lact_mal_DH
IPR016040 NAD(P)-binding domain (Domain)
 [2-139]  4.4e-45 G3DSA:3.40.50.720
G3DSA:3.40.50.720   NAD(P)-bd
 [1-140]  4.10001399699343e-48 SSF51735
SSF51735   NAD(P)-bd
IPR022383 Lactate/malate dehydrogenase, C-terminal (Domain)
 [144-300]  2.5e-22 PF02866
PF02866   Ldh_1_C
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 308 amino acids
molecular mass 33,489.87 Da
pI 6.32
aa composition
AlaValLeuIlePheTrpProMetGlySer
9.7
(30aa)		8.8
(27aa)		9.1
(28aa)		7.5
(23aa)		1.6
(5aa)		0
(0aa)		4.5
(14aa)		4.5
(14aa)		9.1
(28aa)		5.8
(18aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
4.9
(15aa)		0
(0aa)		2.6
(8aa)		2.3
(7aa)		4.5
(14aa)		6.5
(20aa)		1
(3aa)		5.2
(16aa)		4.5
(14aa)		7.8
(24aa)

open this sectionSequence